FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP3_FRASC (ATP-dependent Clp protease proteolytic subunit 3 OS=Frankia sp. (strain CcI3) GN=clpP3 PE=3 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.923e-42 Identity = 84/172 (48.84%), Postives = 122/172 (70.93%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D LLKERIVFLG IDD A+ +++QLL L+++DP +DI +++NSPGGS ++ AIYD +Q VR D+ST+ +G +AS A+++L GT GKRFA+ N+RI+IHQP GQ D+EIQAREI+ + +++ TGR+ ++++D +RD+ S EA EYG+ID VI Sbjct: 28 DPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISIYINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILIHQPSAQGEGQSSDIEIQAREILRVRALQETMLARHTGRTETEIRRDTERDKIFSADEAEEYGLIDEVI 199
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_THEFY (ATP-dependent Clp protease proteolytic subunit 1 OS=Thermobifida fusca (strain YX) GN=clpP1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.923e-42 Identity = 88/181 (48.62%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 236 TAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQP-MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 TA E + L +ERI+F+G IDD A+ II+Q++ L+ D +DI L++NSPGGS ++ MAIYD +Q VR D+ TV +G +AS A+++L GGTKGKR A+PN+RI+IHQP G GQ DVEI A EIM + I++ TGRS E++ +DI+RD+ ++ EA EYGI+D V+ Sbjct: 34 TAYGVKEMNPYNKLFEERIIFVGVQIDDTSANDIIAQMMTLEHIDSDRDITLYINSPGGSFTSLMAIYDTMQFVRPDIQTVCVGQAASAAAVLLAGGTKGKRTALPNSRILIHQPATEGTHGQASDVEIMANEIMRIRHQLETILAKHTGRSVEEISRDIERDKILTAEEAKEYGIVDDVL 214
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_CORDI (ATP-dependent Clp protease proteolytic subunit 1 OS=Corynebacterium diphtheriae GN=clpP1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.923e-42 Identity = 87/176 (49.43%), Postives = 122/176 (69.32%), Query Frame = 2 Query: 254 EADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQP-MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 E + L +ERI+FLG +DD A+ I++QLL+L+ DP +DI +++NSPGGS ++ MAIYD +Q VR DV TV LG +AS A+++L G GKR +PN+R++IHQP G GQV D+EIQA+EI + + ++ TGRS EQV+ D DRD+ ++ EAVEYGI+D V D Sbjct: 28 ETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRACLPNSRVLIHQPATQGTQGQVSDLEIQAKEIERMRTLMEQTLARHTGRSAEQVRIDTDRDKILTAEEAVEYGIVDQVFD 203
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_BACC1 (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus cereus (strain ATCC 10987) GN=clpP1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.923e-42 Identity = 81/174 (46.55%), Postives = 123/174 (70.69%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+ +G+ I+D VA ++++QLL L+A+D KDI L++NSPGGS A AI D + L+ +V T+ +G++AS +L+L G KGKRFA+PN+ IMIHQP+GG GQ ++EI A+ I+ K + +II+ TG+ E++ D +RD +M+ EA EYGI+DGV+++ Sbjct: 19 DIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDIFLYINSPGGSTXAGFAILDXMNLIXPEVQTLCMGLAASFGALLLLAGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEAKEYGIVDGVVEK 192
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_TROW8 (ATP-dependent Clp protease proteolytic subunit 2 OS=Tropheryma whipplei (strain TW08/27) GN=clpP2 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.511e-42 Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 2 Query: 236 TAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGAS--GQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 TA + D L ++RIVFLG IDD AD +++QLL+L+ QD +DI +++NSPGGS +A AIYD +Q +R + TV LG +AS A++IL GT GKR A+PN RI+IHQP+ +S GQ D+EIQAREIM ++ + ++ + +S +QV KDIDRD+ +S +A+EYG+ID ++ Sbjct: 16 TAYGYKQVDPYTKLFEDRIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPGGSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQALEYGLIDQIL 197
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_TROWT (ATP-dependent Clp protease proteolytic subunit 1 OS=Tropheryma whipplei (strain Twist) GN=clpP1 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.511e-42 Identity = 87/182 (47.80%), Postives = 126/182 (69.23%), Query Frame = 2 Query: 236 TAMRGAEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGAS--GQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 TA + D L ++RIVFLG IDD AD +++QLL+L+ QD +DI +++NSPGGS +A AIYD +Q +R + TV LG +AS A++IL GT GKR A+PN RI+IHQP+ +S GQ D+EIQAREIM ++ + ++ + +S +QV KDIDRD+ +S +A+EYG+ID ++ Sbjct: 16 TAYGYKQVDPYTKLFEDRIVFLGVQIDDASADDVMAQLLVLEGQDAERDIIMYINSPGGSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLALPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRDKILSSEQALEYGLIDQIL 197
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_NEIMB (ATP-dependent Clp protease proteolytic subunit OS=Neisseria meningitidis serogroup B GN=clpP PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 3.280e-42 Identity = 86/188 (45.74%), Postives = 127/188 (67.55%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPM--GGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 799 RG A D LLKERIVFL + D A+ +++QLL L++++P KDI ++NSPGGS++A M+IYD + ++ DVST+ LG +AS + +L G KGKRFA+PN+RIMIHQP+ GG GQ D+EI ARE++ K+ R+++ R +++D DRD +MS EA EYG+ID +++ + + L Sbjct: 17 RGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCDRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLRL 204
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJR (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni (strain RM1221) GN=clpP PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.280e-42 Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+ L I D +A +I++QLL L+A+DPTKDI L++NSPGG +++ +IYD + ++ DV T+ +G +AS + +L G +GKRFA+PN+RIMIHQP+GGA GQ D+EIQA+EI+ K I++ T + ++ KD +RD +MS EA EYG+ID V+++ Sbjct: 18 DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEK 191
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJJ (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=clpP PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.280e-42 Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+ L I D +A +I++QLL L+A+DPTKDI L++NSPGG +++ +IYD + ++ DV T+ +G +AS + +L G +GKRFA+PN+RIMIHQP+GGA GQ D+EIQA+EI+ K I++ T + ++ KD +RD +MS EA EYG+ID V+++ Sbjct: 18 DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSTQEAKEYGLIDKVLEK 191
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CAMJE (ATP-dependent Clp protease proteolytic subunit OS=Campylobacter jejuni GN=clpP PE=1 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 3.280e-42 Identity = 82/174 (47.13%), Postives = 122/174 (70.11%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 D LLK+RI+ L I D +A +I++QLL L+A+DPTKDI L++NSPGG +++ +IYD + ++ DV T+ +G +AS + +L G +GKRFA+PN+RIMIHQP+GGA GQ D+EIQA+EI+ K I++ T + ++ KD +RD +MS EA EYG+ID V+++ Sbjct: 18 DIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIHQPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEYGLIDKVLEK 191 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |