FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNJA (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=clpP2 PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 8.059e-49 Identity = 91/188 (48.40%), Postives = 136/188 (72.34%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + RG A D LL++RI+FLG +DD +A+ I++Q+L L+++DP KDI L++NSPGGS+ A MAIYD +Q ++ DVST+ +G++AS + +L GG KGKR A+P+ RIMIHQP+GGA G D+EIQA+EI+ K++ +++ TG+ E++++D DRD +M+P +A EYG+ID VI R Sbjct: 3 PTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVITR 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_STAHJ (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpP PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.053e-48 Identity = 94/186 (50.54%), Postives = 130/186 (69.89%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN +MIHQP+GGA GQ ++EI A I+ ++ +I++ TG+S E++QKD DRD +++ EA EYG+ID V+ Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAKEYGLIDNVM 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_RUBXD (ATP-dependent Clp protease proteolytic subunit OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=clpP PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.053e-48 Identity = 96/192 (50.00%), Postives = 136/192 (70.83%), Query Frame = 2 Query: 206 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQP-MGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 P P + RG A D LLK+RI+FLG +DD VA+AI++QLL L+++DP +DI L++NSPGGS+SA +AIYD +Q V+ D+ T ALGM+AS + +L GTKGKRFA+PNTRI++HQP +GG +GQ DVEI ARE++ K I+S TG+ ++++++D DRD M EA+EYG+ID ++ Sbjct: 6 PQGVIPYVIEQSPRGERAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDINLYINSPGGSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRILLHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEAIEYGLIDDIV 197
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_RALME (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=clpP PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.375e-48 Identity = 96/207 (46.38%), Postives = 139/207 (67.15%), Query Frame = 2 Query: 170 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 787 LA Q L P + RG A D LLKER+VF+ ++D A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DV T+ +GM+AS + +L G KGKR A+PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ E++ +D DRD +MS +AV+YG+ID VI R S Sbjct: 10 LATTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVITRRS 216
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_DESAH (ATP-dependent Clp protease proteolytic subunit OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=clpP PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.375e-48 Identity = 95/201 (47.26%), Postives = 141/201 (70.15%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDSIIPLVPVPEK 817 P + RG A D LLK+RI+FLG+ +DD VA+ I++QLL L+++DP KDI ++NSPGG ++A MA+YD +Q ++ DV+TV +G +AS +L+L G KGKRF++PN+RIMIHQP+GGA GQ D++IQA EI+ K+ + I+S TG++F+++ +D DRD +MS +A EYG++D V+ RD + EK Sbjct: 5 PMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQAKEYGLVDHVVASRDELEKAEAAKEK 205
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_RALEH (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=clpP PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48 Identity = 95/205 (46.34%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 170 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 LA Q L P + RG A D LLKER+VF+ ++D A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ E++ +D DRD +MS +AV+YG+ID V+ R Sbjct: 10 LATTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVLAR 214
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_DESAA (ATP-dependent Clp protease proteolytic subunit OS=Desulfatibacillum alkenivorans (strain AK-01) GN=clpP PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48 Identity = 95/199 (47.74%), Postives = 136/199 (68.34%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI----DRDSI 790 +S P RG D LLK+RI+FLG ++D VA++II+QLL L++ DP KDI ++NSPGGS++A MAIYD + ++ +++TV +G +AS +++L G GKR+++PN RI+IHQPMGG GQ D+ IQA+EI+ K+ I++ TG+ +QVQ+D DRD +MSP+EA EYG+ID VI D DSI Sbjct: 1 MSYIPYVVEQTSRGERTYDIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDINFYINSPGGSVTAGMAIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARILIHQPMGGFQGQASDIAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEAKEYGLIDHVILNREDLDSI 199
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CUPTR (ATP-dependent Clp protease proteolytic subunit OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=clpP PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 1.795e-48 Identity = 95/205 (46.34%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 170 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 LA Q L P + RG A D LLKER+VF+ ++D A+ +++QLL L++++P KD+ L++NSPGGS+SA +AIYD +Q ++ DVST+ +GM+AS + +L G KGKR A+PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ E++ +D DRD +MS +AV+YG+ID V+ R Sbjct: 10 LATTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDVSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQAVDYGLIDKVLAR 214
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_HALOH (ATP-dependent Clp protease proteolytic subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=clpP PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 2.345e-48 Identity = 90/195 (46.15%), Postives = 138/195 (70.77%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 +S P RG + D LLK+RIVFLG+ I+D +++ II+QLL L+A+DP KDI L++NSPGGS++A +A+YD +Q ++ DV+T+ +G +AS +L+L GTKGKR+A+PN R+MIHQP GG G+ + EI +E++ ++ I+S TG+S EQ+ KD+++D +M+ EA+EYGIID VI ++ + Sbjct: 1 MSLIPVVVEQTNRGERSYDIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDIHLYINSPGGSVTAALAMYDTIQYIKPDVATICMGQAASAGALLLASGTKGKRYALPNARVMIHQPAGGVQGKATEAEIHIKELLRLRERLNEILSKHTGKSVEQISKDVEQDYFMTAEEALEYGIIDEVITKNEL 195
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_BACHD (ATP-dependent Clp protease proteolytic subunit 1 OS=Bacillus halodurans GN=clpP1 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.063e-48 Identity = 92/179 (51.40%), Postives = 129/179 (72.07%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVID 778 RG A D LLK+RI+ LG IDD VA++I++QLL L A+DP KDI L++NSPGGS++A MAIYD +Q ++ +VST+ +GM+AS + +L G KGKRFA+PN+ +MIHQP+GG GQ D+EI R I+ ++ RI++ TG+ EQ+ KD DRD +M+ +A EYG+ID VI+ Sbjct: 13 RGERAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDISLYINSPGGSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAREYGLIDKVIE 191 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |