FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_RALSO (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum GN=clpP PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.224e-48 Identity = 94/205 (45.85%), Postives = 139/205 (67.80%), Query Frame = 2 Query: 170 LALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 LA Q L P + RG A D LLKER++F+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA +A+YD +Q V+ DVST+ +GM+AS + +L G KGKR+A+PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I+S TG+ +++ +D DRD +MS +A EYG+ID V+ R Sbjct: 10 LARTQASALETQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEYGLIDKVLAR 214
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_MAGSM (ATP-dependent Clp protease proteolytic subunit OS=Magnetococcus sp. (strain MC-1) GN=clpP PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 5.224e-48 Identity = 91/190 (47.89%), Postives = 132/190 (69.47%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 +S P T RG A D LLKER+VFL +++ +A+ +++QLL L++++P KDI L++NSPGGS++A MAIYD +Q +R VST+ +G +AS +++L G GKR +PN R+MIHQP+GG SGQ D EI AREI+ ++N +++S TG+ EQVQ D +RD ++S EAVEYG++D VI Sbjct: 1 MSLVPMVVETTNRGERAYDIYSRLLKERVVFLVGQVEEHMANLVVAQLLFLESENPEKDIHLYINSPGGSVTAGMAIYDTMQFIRPSVSTLCIGQAASMGAVLLAAGEAGKRLVLPNARVMIHQPLGGFSGQASDFEIHAREILRIRENLNQVLSHHTGKPLEQVQLDTERDNFLSATEAVEYGLVDKVI 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_PSEMY (ATP-dependent Clp protease proteolytic subunit OS=Pseudomonas mendocina (strain ymp) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 88/188 (46.81%), Postives = 132/188 (70.21%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + RG A D LLKER++FL ++D++A+ I +QLL L+A++P KDI L++NSPGGS++A MAIYD +Q ++ADVST +G + S + +L GG KGKRF +PN+R+MIHQP+GG GQ D+EI A+EI+ ++ +++ TG+S E +++D +RD +MS AVEYGI+D V ++ Sbjct: 21 PMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLICAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLLAGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLETIERDTNRDNFMSAPRAVEYGIVDAVHEK 208
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_DEHSC (ATP-dependent Clp protease proteolytic subunit OS=Dehalococcoides sp. (strain CBDB1) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 95/193 (49.22%), Postives = 136/193 (70.47%), Query Frame = 2 Query: 206 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + P ++ RG A D LLLKERI+FLG+ I+D VA+ +I+QLL LD +DP KDI L+++SPGG +SA +A+YD +QL+R VST+ +G++AS A+++L G KGKR+A+PN I +HQ MGGA GQ D+EI AREIM +D I+ TG++ E++ D DRD Y+S +AVEYG+ID ++ + Sbjct: 4 PENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAVEYGLIDEILQK 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_DEHSB (ATP-dependent Clp protease proteolytic subunit OS=Dehalococcoides sp. (strain BAV1) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 95/193 (49.22%), Postives = 136/193 (70.47%), Query Frame = 2 Query: 206 PLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 P + P ++ RG A D LLLKERI+FLG+ I+D VA+ +I+QLL LD +DP KDI L+++SPGG +SA +A+YD +QL+R VST+ +G++AS A+++L G KGKR+A+PN I +HQ MGGA GQ D+EI AREIM +D I+ TG++ E++ D DRD Y+S +AVEYG+ID ++ + Sbjct: 4 PENVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDISLYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIHMHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAVEYGLIDEILQK 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CHLPD (ATP-dependent Clp protease proteolytic subunit OS=Chlorobium phaeobacteroides (strain DSM 266) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 99/205 (48.29%), Postives = 141/205 (68.78%), Query Frame = 2 Query: 212 SSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPLVPVPEKVK 823 S P T+ RG A D LL+ERI+FLG+ ID+ VA I++QL+ L+++DP +DI ++VNSPGGS+SA + IYD +Q +R DVSTV +GM+AS + +L GTKGKR ++P++RIMIHQP GGA GQ D+ IQAREI + I++ TG+ +QV++D +RDR+M+ EA+EYGIID + ++ P P+K K Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAQEALEYGIIDQIFEKR------PKPDKEK 225
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURTA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 92/189 (48.68%), Postives = 133/189 (70.37%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 772 L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN R+MIHQP+GGA GQ D+EIQAREI++ KD +++ TG+ E++ +D DRD +MS +A YG+ID V Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURS3 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia sp. (strain 383) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 90/190 (47.37%), Postives = 136/190 (71.58%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ ++++ TG+ E++ +D DRD +MS +A YG+ID V+ Sbjct: 24 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BACA2 (ATP-dependent Clp protease proteolytic subunit OS=Bacillus amyloliquefaciens (strain FZB42) GN=clpP PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 89/182 (48.90%), Postives = 134/182 (73.63%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 787 RG A D LLK+RI+ LG+ IDD VA++I+SQLL L+A+DP KDI +++NSPGGS++A MAIYD +Q ++ VST+ +GM+AS + +L G KGKR+A+PN+ +MIHQP+GGA GQ ++EI A+ I+ +D ++++ TG+ E +++D DRD + S EA+EYG+ID V+ R++ Sbjct: 13 RGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVLTRNT 194
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_ANASP (ATP-dependent Clp protease proteolytic subunit 1 OS=Anabaena sp. (strain PCC 7120) GN=clpP1 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.823e-48 Identity = 92/180 (51.11%), Postives = 131/180 (72.78%), Query Frame = 2 Query: 245 RGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDR 781 RG A D LL+ERIVFLG +D +A+ I++QLL LDA+DP KDI L++NSPGGS++A M I+D ++ +R DV T+ G++AS + +L G KGKR ++P++RIMIHQP+GGA GQ D+EIQAREI+++K ++ TG+ E++ +D +RD +MSP EA +YG+ID VIDR Sbjct: 12 RGERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDYGLIDQVIDR 191 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |