FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_JANMA (ATP-dependent Clp protease proteolytic subunit OS=Janthinobacterium sp. (strain Marseille) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 94/190 (49.47%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P + RG A D LLKERI+FL ++D +A+ I++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ +VST+ G++AS + +L G KGKRF++PN+RIMIHQP+GGA GQ D+EIQAREI++ ++ I++ TG+S E++ KD DRD +MS AV YG+ID V+ Sbjct: 17 LGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADAAVTYGMIDKVL 206
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURVG (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A YG+ID V+ Sbjct: 24 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSDDAKAYGLIDQVL 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURCM (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A YG+ID V+ Sbjct: 24 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURCH (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain HI2424) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A YG+ID V+ Sbjct: 24 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURCA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia cenocepacia (strain AU 1054) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 90/190 (47.37%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 L P T+ RG + D LLKER+VF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A YG+ID V+ Sbjct: 24 LGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMSSEDAKAYGLIDQVL 213
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ANADF (ATP-dependent Clp protease proteolytic subunit OS=Anaeromyxobacter sp. (strain Fw109-5) GN=clpP PE=3 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 8.911e-48 Identity = 97/192 (50.52%), Postives = 130/192 (67.71%), Query Frame = 2 Query: 203 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 +P P RG + D LLK+RIVFLG IDD VA+ +I+QLL L+++DP KDI L++NSPGGS+++ +AIYD +Q V+ VST+ LG +AS + +L GG GKRFA+PN RIMIHQPMGG GQ D++IQAREI+ K I++ T + E+++KD DRD +M EA EYG+ID VI Sbjct: 1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDKDISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNARIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAGEAKEYGLIDEVI 192
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_PORGI (ATP-dependent Clp protease proteolytic subunit OS=Porphyromonas gingivalis GN=clpP PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.164e-47 Identity = 91/178 (51.12%), Postives = 129/178 (72.47%), Query Frame = 2 Query: 251 AEADAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRD 784 A+ D L+ +RI+FLG IDD+ A+ I +QLL LD+ DP KDI +++NSPGGS+ A IYD +Q + DV+T+ GM+AS AS++L GTKGKRFA+P++R+MIHQP+GG GQ D+EI AREI+ K IIS +G+ EQV+KD DRD +M+ EA+EYG+ID +++++ Sbjct: 43 AQMDVFSRLMMDRIIFLGTQIDDYTANVIQAQLLYLDSADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLLVAGTKGKRFALPHSRVMIHQPLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVEQVEKDSDRDYWMTAPEALEYGMIDKILEKN 220
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_MACCJ (ATP-dependent Clp protease proteolytic subunit OS=Macrococcus caseolyticus (strain JCSC5402) GN=clpP PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.164e-47 Identity = 93/186 (50.00%), Postives = 130/186 (69.89%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 P + RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++NSPGGS++A MAIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN +MIHQP+GGA GQ ++EI AR I+ ++ RI++ TG+ E+++KD DRD +++ EA YG+ID V+ Sbjct: 5 PTVIESTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAKAYGLIDEVM 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_MYXXA (ATP-dependent Clp protease proteolytic subunit 2 OS=Myxococcus xanthus GN=clpP2 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.164e-47 Identity = 95/200 (47.50%), Postives = 135/200 (67.50%), Query Frame = 2 Query: 203 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 799 +P P RG + D + LLK+RIV LG IDD VA+ I++QLL L+++DP KDI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+A+P++RIMIHQP+GG GQ D+EIQA+EI+ K +I TG+S E+V+KD DRD +M EA YGIID + + ++ L Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEIQNPRKVVGL 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.164e-47 Identity = 89/172 (51.74%), Postives = 130/172 (75.58%), Query Frame = 2 Query: 260 DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 D L +RI+FLG +DD +A+AII+ +L LD++DP KDI L++NSPGGS+SA +AIYD +Q VRADV+T+ +G++AS S +L G KGKR ++P++RIMIHQP+GGA GQ D+ IQA+EI++ KD +I+S TG+ E++++D DRD +MS +A +YG+ID V+ Sbjct: 21 DIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAEDAKQYGLIDQVV 192 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |