FC878080
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_LACF3 (ATP-dependent Clp protease proteolytic subunit OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=clpP PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47 Identity = 89/195 (45.64%), Postives = 140/195 (71.79%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSI 790 ++ P + RG A D LLK+RI+ L I+D +A++I++QLL LDAQD TKDI L++NSPGG +++ MAIYD + +++DV T+ +GM+AS AS+++ GTKGKRF +P++ +MIHQP GGA GQ +++I A EI+ + I++ +G+SFEQV++D +RD Y++ EAV+YG++DGV+D +++ Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDNMANSIVAQLLFLDAQDSTKDIYLYINSPGGVVTSGMAIYDTMNFIKSDVQTIVIGMAASMASVLVSSGTKGKRFGLPHSTVMIHQPSGGAQGQQTEIQIAAEEILKTRKMINEILAKNSGQSFEQVEQDTERDHYLTAQEAVDYGLLDGVMDSNNL 195
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_ENTFA (ATP-dependent Clp protease proteolytic subunit OS=Enterococcus faecalis GN=clpP PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47 Identity = 95/192 (49.48%), Postives = 130/192 (67.71%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSII 793 P + RG A D LLK+RI+ L IDD VA+++I+QLL LDAQD KDI L++NSPGGS+SA +AI+D + V+ADV T+ LGM+AS S +L G KGKRFA+PN IMIHQP+GGA GQ ++EI AR I+ + I++ TG+ E +++D DRD YM+ +A EYG+ID V++ S + Sbjct: 5 PTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDIYLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQAKEYGLIDEVMENSSAL 196
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURP1 (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia pseudomallei (strain 1710b) GN=clpP PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47 Identity = 91/189 (48.15%), Postives = 133/189 (70.37%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 772 L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN R+MIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++ +D DRD +MS +A YG+ID V Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_BURMA (ATP-dependent Clp protease proteolytic subunit OS=Burkholderia mallei GN=clpP PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.520e-47 Identity = 91/189 (48.15%), Postives = 133/189 (70.37%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 772 L P T+ RG + D LLKERIVF+ ++D A+ +++QLL L++++P KDI L++NSPGGS+SA MAIYD +Q V+ DVST+ +G++AS + +L G KGKR+A+PN R+MIHQP+GGA GQ D+EIQAREI++ +D +++ TG+ E++ +D DRD +MS +A YG+ID V Sbjct: 14 LGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVAQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLASGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIARDTDRDNFMSSEDAKAYGLIDHV 202
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_CLONN (ATP-dependent Clp protease proteolytic subunit OS=Clostridium novyi (strain NT) GN=clpP PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47 Identity = 92/190 (48.42%), Postives = 128/190 (67.37%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 +S P RG + D LLK+RI+FLG ++D A +++QLL L+A+DP KDI L++NSPGGS++A MAIYD +Q ++ DVST+ +GM+AS + +L G KGKRFA+PN+ IMIHQP+GG GQ D+ I A I+ KD I+S TG+ E ++KD++RD +M EA EYG+ID VI Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDIYLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEIMIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEAKEYGLIDDVI 190
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP2_BURXL (ATP-dependent Clp protease proteolytic subunit 2 OS=Burkholderia xenovorans (strain LB400) GN=clpP2 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47 Identity = 92/203 (45.32%), Postives = 137/203 (67.49%), Query Frame = 2 Query: 167 TLALQQQQRQHDVPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGV 772 TL Q + L P T+ RG + D LLKERIVFL ++D A+ +++Q+L L++++P KDI ++NSPGGS+SA MAIYD +Q ++ DVST+ +G++AS + +L G KGKRFA+PN+R+MIHQP+GGA GQ D+EIQAREI++ K+ +++ TG+ E++ +D DRD +MS +A YG++D V Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDDAQAYGLVDQV 212
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP1_MYXXD (ATP-dependent Clp protease proteolytic subunit 1 OS=Myxococcus xanthus (strain DK 1622) GN=clpP1 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.985e-47 Identity = 95/200 (47.50%), Postives = 134/200 (67.00%), Query Frame = 2 Query: 203 VPLSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDSIIPL 799 +P P RG + D LLK+RIV LG IDD VA+ I++QLL L+++DP KDI L++NSPGGS++A +AIYD +Q V+ VST+ +G +AS +++L G KGKR+A+P++RIMIHQP+GG GQ D+EIQA+EI+ K +I TG+S E+V+KD DRD +M EA YGIID + + ++ L Sbjct: 1 MPFMPVPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASEAKAYGIIDEIQNPRKVVGL 200
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_SYNFM (ATP-dependent Clp protease proteolytic subunit OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=clpP PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47 Identity = 96/198 (48.48%), Postives = 137/198 (69.19%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI-DRDSIIP 796 +S P + RG A D LL++RI+FLG I D VA+ II+QLL L+++DP KDI ++NSPGG ++A +AIYD +Q ++ +VST+ +G +AS A+++L G KGKR+A+P+ RIM+HQPMGG GQ DVEIQA+EI+ ++ I+ TGR EQ+Q+D DRD YMS +A EYG++D + R SI+P Sbjct: 1 MSLIPIVVEQSSRGERAFDIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDIHFYINSPGGLVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRIMLHQPMGGFQGQATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQAREYGMVDHIFTSRLSILP 198
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_STAS1 (ATP-dependent Clp protease proteolytic subunit OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpP PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47 Identity = 92/190 (48.42%), Postives = 131/190 (68.95%), Query Frame = 2 Query: 221 PQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVIDRDS 787 P T RG A D LLK+RI+ LG+ IDD VA++I+SQLL L AQD KDI L++NSPGGS++A AIYD +Q ++ DV T+ +GM+AS S +L G KGKRFA+PN +MIHQP+GGA GQ ++EI A I+ + +I++ TG+S E++++D DRD ++S EA +YG++D V+ +S Sbjct: 5 PTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIYLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEAKDYGLVDQVMVPES 194
BLAST of FC878080 vs. ExPASy Swiss-Prot
Match: CLPP_SALTY (ATP-dependent Clp protease proteolytic subunit OS=Salmonella typhimurium GN=clpP PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.593e-47 Identity = 85/190 (44.74%), Postives = 133/190 (70.00%), Query Frame = 2 Query: 209 LSSAPQTPATAMRGAEA-DAMGLLLKERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNSPGGSLSATMAIYDVVQLVRADVSTVALGMSASTASLILGGGTKGKRFAMPNTRIMIHQPMGGASGQVLDVEIQAREIMHNKDNFTRIISGFTGRSFEQVQKDIDRDRYMSPIEAVEYGIIDGVI 775 ++ P RG + D LLKER++FL ++D +A+ I++Q+L L+A++P KDI L++NSPGG ++A M+IYD +Q ++ DVST+ +G +AS + +L G KGKRF +PN+R+MIHQP+GG GQ D+EI AREI+ K +++ TG+S EQ+++D +RDR++S EAVEYG++D ++ Sbjct: 14 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSIL 203 The following BLAST results are available for this feature:
BLAST of FC878080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878080 ID=FC878080; Name=FC878080; organism=Citrus clementina; type=EST; length=837bpback to top |