FC878082
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878082 vs. ExPASy Swiss-Prot
Match: RME6_CAEEL (Receptor-mediated endocytosis protein 6 OS=Caenorhabditis elegans GN=rme-6 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 7.923e-13 Identity = 54/215 (25.12%), Postives = 95/215 (44.19%), Query Frame = 2 Query: 173 VRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRP--EHLDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 808 V ++ F F + A E + ++ T + + + W AT + AM +E+YV+ ++ F + D D+ + I + + P + L IP L EA W A+ EL ++ ++K+ ++S + ADD PVL+++IIKANP L SN++F++ + + AYY+ N SA +I Sbjct: 879 VTAVLKFYDEFKYLRAQDER-AEFLKNLLTFLRDRLMQNVDWNFATDTMMSRAMTTIERYVIFAVYDNAFYPNRDADHHRDKLLRGTIAKVSDVVTPVNDFLKIPEHLHGEAPWPSAQAELSMLDIYVTAQDKLNCVVRCCDVINNL---VALSSKNAVASADDLTPVLVFVIIKANPRALLSNVQFVETFAGDRIESGRDAYYWVNFKSAVEYI 1089
BLAST of FC878082 vs. ExPASy Swiss-Prot
Match: RME6_DROME (Receptor-mediated endocytosis protein 6 homolog OS=Drosophila melanogaster GN=CG1657 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12 Identity = 51/166 (30.72%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 320 IESAMEGLEKYVMTKLFSRT-FASTSEDVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 808 +++A +E+ ++ +++ + F + DV D+ +S I LQ F+ P H L I EA W A+++L + A K PREK+ +S + ADD LPVLIY++I ANPP L S +++I + + L E +Y+T S FI Sbjct: 1545 VDAARVAIERMLLEQMYEQVMFPNEDADVSRDEVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSS----GRVPAADDLLPVLIYVVIMANPPYLLSTVEYISCFLGK-KLEGEDEFYWTLFGSVVKFI 1705
BLAST of FC878082 vs. ExPASy Swiss-Prot
Match: RME6_DROPS (Receptor-mediated endocytosis protein 6 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA14078 PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.144e-11 Identity = 51/166 (30.72%), Postives = 80/166 (48.19%), Query Frame = 2 Query: 320 IESAMEGLEKYVMTKLFSRT-FASTSEDVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFI 808 +++A E +E+ ++ ++ + F + DV D +S I LQ F+ P H L I EA W A+++L + A K PREK+ + + ADD LPVLIY++I ANPP L S +++I + + L E +Y+T S FI Sbjct: 1607 VDAAREAIERMLLELMYQQVMFPNEDADVSRDTVLSAHIGKLQRFVHPAHPALCIAQEYLGEAPWTFAQQQLCHMAAYKTPREKLQCIINCISSIMSLLRMSC----GRVPAADDLLPVLIYVVIMANPPYLLSTVEYISCFLGR-KLDGENEFYWTLFGSVVKFI 1767 The following BLAST results are available for this feature:
BLAST of FC878082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878082 ID=FC878082; Name=FC878082; organism=Citrus clementina; type=EST; length=896bpback to top |