FC878086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_BRANA (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Brassica napus GN=AGPS1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.205e-59 Identity = 119/225 (52.89%), Postives = 160/225 (71.11%), Query Frame = 3 Query: 150 NGELMGTKLNPNAKHRNEAGSKLVQKQVCMTLTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + L G KLNP + + +++ ++ +S+ ++ +R+V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E L+L+GDHLYRMDY F+Q HR++ ADIT++ LPMD++RA+ FGLMKI Sbjct: 36 SSSLTGEKLNPTQEIIISNLPRGNERRTPSIVSPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-FLVLAGDHLYRMDYEKFIQAHRETDADITVAALPMDEKRATAFGLMKI 255
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS1_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 1, chloroplastic OS=Vicia faba GN=AGPC PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.205e-59 Identity = 117/194 (60.31%), Postives = 148/194 (76.29%), Query Frame = 3 Query: 243 LTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 LT +S+ ++ +R+V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E LIL+GDHLYRMDY F+Q HR+S ADIT++ LPMD++RA+ FGLMKI Sbjct: 55 LTPKAVSDSQNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-YLILAGDHLYRMDYEKFIQAHRESDADITVAALPMDEKRATAFGLMKI 243
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_BETVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic (Fragment) OS=Beta vulgaris GN=AGPB1 PE=2 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.880e-59 Identity = 116/202 (57.43%), Postives = 151/202 (74.75%), Query Frame = 3 Query: 219 VQKQVCMTLTADIAGESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + + + ++ +SK ++ +R+V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E LIL+GDHLYRMDY FVQ HR++ ADIT++ LPMD++RA+ FGLMKI Sbjct: 40 ISSRAPIVVSPKAVSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-YLILAGDHLYRMDYERFVQAHRETDADITVAALPMDEKRATAFGLMKI 236
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 6.416e-59 Identity = 114/173 (65.90%), Postives = 138/173 (79.77%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + V A+ILGGGAGTRLYPLTK RAKPAVP+ G YRLID+P+SNCIN+ I K+Y+LTQ+NSASLNRHL R YN+ F DG VEVLAA QT WFQGTADAVRQ+ WLF++ +++ LILSGDHLYRMDY DFV+ HR++GADIT+S +P+D++RAS FGLMKI Sbjct: 2 KKVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINAEILKIYVLTQFNSASLNRHLTRTYNF---TGFHDGFVEVLAAQQT--TENPSWFQGTADAVRQYGWLFDE---WDVDEYLILSGDHLYRMDYSDFVKRHRETGADITLSVVPIDEKRASSFGLMKI 166
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS2_VICFA (Glucose-1-phosphate adenylyltransferase small subunit 2, chloroplastic OS=Vicia faba GN=AGPP PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 1.429e-58 Identity = 115/187 (61.50%), Postives = 145/187 (77.54%), Query Frame = 3 Query: 264 ESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 +SK ++ +R+V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E L+L+GDHLYRMDY F+Q HR+S ADIT++ LPMD+ RA+ FGLMKI Sbjct: 66 DSKNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNLGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-YLVLAGDHLYRMDYERFIQAHRESDADITVAALPMDEARATAFGLMKI 247
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_ORYSJ (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=AGPS PE=2 SV=4) HSP 1 Score: 224.942 bits (572), Expect = 4.159e-58 Identity = 111/187 (59.36%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 264 ESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 +SK ++ + +V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + + LIL+GDHLYRMDY F+Q HR++ +DIT++ LPMD++RA+ FGLMKI Sbjct: 68 DSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGNNIGGYKNEGFVEVLAAQQSPD--NPNWFQGTADAVRQYLWLFEEHN---VMEFLILAGDHLYRMDYEKFIQAHRETDSDITVAALPMDEKRATAFGLMKI 249
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_HORVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.159e-58 Identity = 112/187 (59.89%), Postives = 142/187 (75.94%), Query Frame = 3 Query: 264 ESKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 +SK ++ + +V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + + LIL+GDHLYRMDY F+Q HR++ ADIT++ LPMD+ RA+ FGLMKI Sbjct: 67 DSKSSQTCLDPDASTSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPD--WFQGTADAVRQYLWLFEEHN---VMEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEERATAFGLMKI 248
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_ARATH (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic OS=Arabidopsis thaliana GN=APS1 PE=2 SV=2) HSP 1 Score: 224.557 bits (571), Expect = 5.432e-58 Identity = 112/172 (65.12%), Postives = 139/172 (80.81%), Query Frame = 3 Query: 309 TVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 +V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+LTQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + V+E LIL+GDHLYRMDY F+Q HR++ ADIT++ LPMD++RA+ FGLMKI Sbjct: 89 SVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSP--ENPNWFQGTADAVRQYLWLFEE--HNVLE-YLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEQRATAFGLMKI 255
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGS_WHEAT (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic OS=Triticum aestivum GN=AGP-S PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 2.064e-57 Identity = 114/186 (61.29%), Postives = 140/186 (75.27%), Query Frame = 3 Query: 267 SKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 SK DL D+ V +ILGGGAGTRLYPLTK+RAKPAVP+G YRLID+P+SNC+NS I+K+Y+ TQ+NSASLNRHL+RAY G +G VEVLAA Q+P WFQGTADAVRQ+ WLFE+ + + LIL+GDHLYRMDY F+Q HR++ ADIT++ LPMD+ RA+ FGLMKI Sbjct: 30 SKHADLNPHVDDS--VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVRTQFNSASLNRHLSRAYGSNIGGYKNEGFVEVLAAQQSPDNPD--WFQGTADAVRQYLWLFEEHN---VMEYLILAGDHLYRMDYEKFIQAHRETDADITVAALPMDEERATAFGLMKI 208
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2) HSP 1 Score: 222.631 bits (566), Expect = 2.064e-57 Identity = 112/173 (64.74%), Postives = 137/173 (79.19%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + V A+ILGGGAGTRLYPLTK RAKPAVP+ G YRLID+P+SNCINS I K+Y+LTQ+NSASLNRH++RAYN+ F +G VEVLAA QT + WFQGTADAVRQ+ WLF R +++ LILSGDHLYRMDY FV+ HR++ ADIT+S +P+DDR+A + GLMKI Sbjct: 12 KRVLAIILGGGAGTRLYPLTKLRAKPAVPLAGKYRLIDIPVSNCINSEIVKIYVLTQFNSASLNRHISRAYNFSG---FQEGFVEVLAAQQT--KDNPDWFQGTADAVRQYLWLF---REWDVDEYLILSGDHLYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKI 176 The following BLAST results are available for this feature:
BLAST of FC878086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878086 ID=FC878086; Name=FC878086; organism=Citrus clementina; type=EST; length=826bpback to top |