FC878086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVY (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus (strain YJ016) GN=glgC2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.219e-33 Identity = 71/171 (41.52%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 312 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + VIL GG G+RL PLT RAKPAVP GG YR+ID ++NC++SG+ K+ +LTQY S SL +HL ++ F E + + G +W++GTADA+ WL E K V++LSGDH+YRMDY ++ H + A +T++C+ ++ + A FG+M I Sbjct: 4 ILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWS-----IFNPELGEYITSVPPQMRKGGKWYEGTADAIYHNLWLLERSEAKY---VMVLSGDHIYRMDYAPMLEEHIANNAALTVACMDVNCKEAKAFGVMGI 166
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBVU (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio vulnificus GN=glgC2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.219e-33 Identity = 71/171 (41.52%), Postives = 104/171 (60.82%), Query Frame = 3 Query: 312 VAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 + VIL GG G+RL PLT RAKPAVP GG YR+ID ++NC++SG+ K+ +LTQY S SL +HL ++ F E + + G +W++GTADA+ WL E K V++LSGDH+YRMDY ++ H + A +T++C+ ++ + A FG+M I Sbjct: 4 ILTVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRKILVLTQYKSHSLQKHLRDGWS-----IFNPELGEYITSVPPQMRKGGKWYEGTADAIYHNLWLLERSEAKY---VMVLSGDHIYRMDYAPMLEEHIANNAALTVACMDVNCKEAKAFGVMGI 166
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_ROSDO (Glucose-1-phosphate adenylyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgC PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.591e-33 Identity = 74/178 (41.57%), Postives = 115/178 (64.61%), Query Frame = 3 Query: 291 EKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 E+R A+ A +L GG G+RLY LT +RAKPA+ GG R+ID P+SN +NSGI ++ + TQY + SL RHL R +++ + +++L A+Q + + W++GTADAV Q + E K I +IL+GDH+Y+ DY + +++H +SGAD+T+ C+ + AS FG+MK+ Sbjct: 5 EQRLAQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRRIGVATQYKAHSLIRHLQRGWSFFRAER--NESLDILPASQQMND--ENWYKGTADAVAQNKDIIEGYGPKYI---IILAGDHIYKQDYAEMIRHHVESGADVTVGCIEVPRMEASGFGVMKV 175
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_ALTMD (Glucose-1-phosphate adenylyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=glgC PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.078e-33 Identity = 79/174 (45.40%), Postives = 113/174 (64.94%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNC+NSGI ++ ++TQY S SL RHL R + + G+ VE+L A+Q ++ W++GTADAV Q + D K V+ILSGDH+YRMDY D + H++SGA +T+SC+ + + A FG+M + Sbjct: 14 RDTYALILAGGKGSRLHELTTWRAKPALYFGGKFRIIDFPLSNCVNSGIRRIGVVTQYKSHSLIRHLVRGWGHFK-KELGES-VEILPASQRFSDS---WYEGTADAVFQNIDIIRDELPKY---VMILSGDHIYRMDYGDMLAKHKESGAKMTVSCMSVPLEEAAGAFGVMSV 179
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB9 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS195) GN=glgC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB8 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS185) GN=glgC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB5 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=glgC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEB2 (Glucose-1-phosphate adenylyltransferase OS=Shewanella baltica (strain OS223) GN=glgC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_BURPP (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=glgC PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.715e-33 Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = 3 Query: 267 SKLRDLEMEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 ++L DL+ RT A++L GG GTRL PLT +R KPAV GG YR+ID +SNC+NSGI ++ ++TQY + SL RHL R +++ G G+ +++ A Q G W++GTADAV Q + R K V++L+GDH+Y+MDY + +H +SGAD T+ C+ + A FG+M + Sbjct: 5 ARLNDLQ------RTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGWSFLRG-EMGE-FIDLWPAQQR--VEGAHWYRGTADAVFQNLDIIRSIRPKY---VVVLAGDHIYKMDYTRMIADHAESGADCTVGCIEVPRMEAVAFGVMHV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_THIDA (Glucose-1-phosphate adenylyltransferase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 81/173 (46.82%), Postives = 108/173 (62.43%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 R A++L GG G+RL LT RAKPAVPIGG YR+ID P+SNC+NSGI ++ +LTQY S SL RHL RA +G T VE+L A Q + K W+QGTADA+ Q + + E VL+L GDH+Y MDY + H Q+GAD+T+ + + A+ FG+M + Sbjct: 26 RKTLALVLAGGEGSRLKDLTAWRAKPAVPIGGKYRIIDFPLSNCVNSGIRRIGVLTQYKSHSLIRHLQRA--WGLMRTEVGEFVEILPAQQRTHK--KEWYQGTADALFQ---NLDIMQRHHPEYVLVLGGDHVYTMDYTQMLLYHVQTGADVTVGSVEVPVAEAAAFGVMSV 191 The following BLAST results are available for this feature:
BLAST of FC878086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878086 ID=FC878086; Name=FC878086; organism=Citrus clementina; type=EST; length=826bpback to top |