FC878086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHESR (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-7) GN=glgC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPVAEAAGAFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHESM (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-4) GN=glgC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPVAEAAGAFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHESA (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain ANA-3) GN=glgC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPVAEAAGAFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEON (Glucose-1-phosphate adenylyltransferase OS=Shewanella oneidensis GN=glgC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.545e-33 Identity = 81/174 (46.55%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG+M++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRYSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPVAEAAGAFGVMEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC2_PSEA6 (Glucose-1-phosphate adenylyltransferase 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=glgC2 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.630e-33 Identity = 78/174 (44.83%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMD-DRRASDFGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSGI ++ ++TQY S SL RHL R + + G+ VE+L A+Q + W++GTADAV Q + R+++ + V+ILSGDH+Y MDY + + +H +SGA +T+SC+P+ + A FG+M + Sbjct: 14 RDTYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIKRIGVVTQYKSHSLIRHLVRGWGH-FRKELGES-VEILPASQ---RSSGNWYEGTADAVFQ---NIDIIRDEIPKYVMILSGDHIYSMDYANILAHHVESGAKMTVSCMPVPIEEAAGAFGVMSV 179
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC2_VIBCH (Glucose-1-phosphate adenylyltransferase 2 OS=Vibrio cholerae GN=glgC2 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.898e-33 Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 318 AVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 AVIL GG G+RL PLT RAKPAVP GG YR+ID ++NC++SG+ ++ +LTQY S SL++HL ++ F E + G +W++GTADA+ WL K V++LSGDH+YRMDY ++ H A +TI+C+ + AS FG+M I Sbjct: 6 AVILAGGMGSRLSPLTDDRAKPAVPFGGKYRIIDFTLTNCLHSGLRRILVLTQYKSHSLHKHLRNGWS-----IFNPELGEFITVVPPQMRKGGKWYEGTADALFHNMWLLARSDAKY---VVVLSGDHIYRMDYAAMLEEHISKNATLTIACMQVPRHEASAFGVMAI 166
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.032e-32 Identity = 77/174 (44.25%), Postives = 105/174 (60.34%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAY-NYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 R VIL GG G+RL PLT+ RAKPAVPIGGAYR+ID +SNC+NS + ++ +LTQY + SL+RH+ A+ NY F E + W+QGTADAV Q + E + E V+IL+GDHLY+M+Y V H + GAD+T+ L + A FG+M++ Sbjct: 23 RQTVTVILAGGRGSRLEPLTRDRAKPAVPIGGAYRIIDFVLSNCLNSDMRRLLLLTQYKAQSLDRHINVAWRNY-----FCRELGEFIDVVPPQQRIDDNWYQGTADAVYQNIYAIE---REAPEYVVILAGDHLYKMNYESMVNFHHRKGADVTVGALRVSREEARQFGVMQV 188
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_BIFA0 (Glucose-1-phosphate adenylyltransferase OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=glgC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.032e-32 Identity = 74/179 (41.34%), Postives = 114/179 (63.69%), Query Frame = 3 Query: 288 MEKRDARTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASDFGLMKI 824 M K++ + + +++L GG GTRL PLT+ RAKPAVP GG YRLID P+SN +NSG ++V +LTQY S SL+RH+++ + + T V + A Q GK W+ G+ADAV Q + ED + + V+I+ DH+YRMD+ V H +SGA+ T++ + ++S FG++++ Sbjct: 1 MAKKNPK-ILSIVLAGGEGTRLMPLTRDRAKPAVPFGGVYRLIDFPLSNLVNSGYSQVIVLTQYKSHSLDRHISQLWRFS---TLLGNYVSPVPAQQ---RLGKHWYLGSADAVYQTINIIEDVQPDI---VVIVGADHVYRMDFEQMVNQHIESGAEFTVAGIRQPIEQSSQFGVIEV 169
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHESW (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain W3-18-1) GN=glgC PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.760e-32 Identity = 79/174 (45.40%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSG+ +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG++++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGVRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRFSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGILAAHAESGADMTVSCLEVPIAEAAGAFGVIEV 177
BLAST of FC878086 vs. ExPASy Swiss-Prot
Match: GLGC_SHEPC (Glucose-1-phosphate adenylyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glgC PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.760e-32 Identity = 79/174 (45.40%), Postives = 115/174 (66.09%), Query Frame = 3 Query: 306 RTVAAVILGGGAGTRLYPLTKQRAKPAVPIGGAYRLIDVPMSNCINSGINKVYILTQYNSASLNRHLARAYNYGSGVTFGDGCVEVLAATQTPGEAGKRWFQGTADAVRQFHWLFEDPRNKVIEDVLILSGDHLYRMDYMDFVQNHRQSGADITISCLPMDDRRASD-FGLMKI 824 R A+IL GG G+RL+ LT RAKPA+ GG +R+ID P+SNCINSG+ +V ++TQY S SL RH+ R + + G+ VE+L A+Q E W+QGTADAV Q + R+++ + V++LSGDH+YRMDY + H +SGAD+T+SCL + A+ FG++++ Sbjct: 12 RETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGVRRVGVVTQYKSHSLIRHVMRGWGHFK-KELGES-VEILPASQRFSE---NWYQGTADAVFQ---NIDIIRHELPKYVMVLSGDHVYRMDYAGILAAHAESGADMTVSCLEVPIAEAAGAFGVIEV 177 The following BLAST results are available for this feature:
BLAST of FC878086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 308
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878086 ID=FC878086; Name=FC878086; organism=Citrus clementina; type=EST; length=826bpback to top |