FC878087

Overview
NameFC878087
Unique NameFC878087
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length885
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC_BAUPU (Lectin OS=Bauhinia purpurea PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 76/258 (29.46%), Postives = 114/258 (44.19%), Query Frame = 1
Query:   97 MLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTL------ASLKLLGDAHMNNGSVRLTR---DVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKGAG----LGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST 828
            MLL++ K      + +   L  +N    T ST T F F             +  LG+A    G++RLTR   D       AG+A YS+PV F    T   A         + +++   I A G AF + P    V   GG LGL   K A        VAVEFDT  + E+SD+   H+G+++NS VS      D  +  +       + I YD  ++   + ++Y N +     LS  +DL + + + + +GFSG T
Sbjct:    1 MLLYNSKSYVLQLIFITLLLTQLNKVKSTSSTLTGFTFPNFWSNTQENGTEIIFLGNATYTPGALRLTRIGEDGIPLKSNAGQASYSRPV-FLWDSTGHVASFYTSFSFIVRSIDVPHITADGFAFFLAPVDSSVKDYGGCLGLFRYKTATDPSKNQVVAVEFDTWPNTEWSDLRYPHIGINVNSTVSVATTRWDNDDAYVTKS---TAHITYDATSKIITVLLTYDNGRHYQ--LSHVVDLPKILPERVRIGFSGGT 252          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC1_PSOTE (Basic agglutinin OS=Psophocarpus tetragonolobus GN=WBAI PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.420e-14
Identity = 71/219 (32.42%), Postives = 109/219 (49.77%), Query Frame = 1
Query:  232 LKLLGDAHMNNGSV-RLTRDVT-VP-YDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGA-GLAFVITPDGEQVGSAGGSLGLLDEKGAGLGFVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGST-------QGSTEIHSI 855
            LKL  DA +++ SV  LT+ V  VP ++  G+ALY+KPV+     T   A         I    P    A GL F I P   Q G  GG  G+ +       FVAVEFDT  +     I   H+G+D+NS++ST+     T+   L +G + N  I+YD  T+  ++ + + +L   +  ++  +DL Q + + + VGFS +T       + +TE H I
Sbjct:   18 LKLQRDARISSNSVLELTKVVNGVPTWNSTGRALYAKPVQVWDSTTGNVASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQTGEGGGYFGIYNPLSP-YPFVAVEFDTFRNTWDPQIP--HIGIDVNSVISTK-----TVPFTLDNGGIANVVIKYDASTKILHVVLVFPSL-GTIYTIADIVDLKQVLPESVNVGFSAATGDPSGKQRNATETHDI 227          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.132e-14
Identity = 73/246 (29.67%), Postives = 123/246 (50.00%), Query Frame = 1
Query:  154 LFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNG--SVRLTRDVTV--PYDGA-GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQV--GSAGGSLGLLDEKGAGLG----FVAVEFDTLMDVEFSDINGNHVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPI-LSFTLDLDQYVNDFMYVGFSGSTQGSTEIHSI 855
            L ++N    + S +  FD        L L GDA +++G  S++LT+  T   P  G+ G+ALY  P+      T+  A         +++   ++ G G+AF I P    +  GS+GG LGL     A        VAVEFDT ++  + D +  H+G+D+N++ S+      T+    ++G L  + I Y+  T+  ++  SY N +      +S+ +DL   + +++ VGFSGST G  + H+I
Sbjct:   27 LMLLNRVNSSDSLSFTFDNFRPDQRDLILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLASFQTTFTFVLSSPT-NNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNNW-DPSHRHIGIDVNTIKSSA-----TVRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNI 265          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 76/263 (28.90%), Postives = 126/263 (47.91%), Query Frame = 1
Query:  136 LSLVFCLFVINNAVITISTATEFDFGTL--TLASLKLLGDAHM-NNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTH--TPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGS-LGLLDEKGAGLG---FVAVEFDTLMDV-EFSDINGNHVGLDLNSMVSTQVVNLDTIN--------VDLKSGDLVNSWIEYDGLTRAFNISVSYSNL--KPKVPILSFTL-DLDQYVNDFMYVGFSGST--QGSTEIHSI 855
            +SL+  LF++   V T  T TEF F       + + + GD+ + +NG +RLT   +   D  G A Y KPVR     +   T           I + + S+ G G  F ++P   +  +     +GLL+E+  G       AVEFDT+    + ++  GNH+GL+ NS+ S     +   N          L SG+ +  +++Y G T+  N++V  + L  KP++P++S  +  L   V D M+VGF+ +T   G +  H +
Sbjct:    8 VSLLLVLFLVRAHVATTETTTEFIFHGFKGNQSEIHMQGDSTITSNGLLRLTDRNS---DVVGTAFYHKPVRLLDSNSTNTTVRSFSTSFIFIIPSSSTSNGGFGFTFTLSPTPNRTDADPEQYMGLLNERNDGNSSNHVFAVEFDTVQGFKDGTNRIGNHIGLNFNSLSSDVQEPVAYFNNNDSQKEEFQLVSGEPIQVFLDYHGPTKTLNLTVYPTRLGYKPRIPLISREVPKLSDIVVDEMFVGFTAATGRHGQSSAHYV 267          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC2_MEDTR (Truncated lectin 2 OS=Medicago truncatula GN=LEC2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.048e-14
Identity = 75/261 (28.74%), Postives = 117/261 (44.83%), Query Frame = 1
Query:  106 FSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHM-NNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSA--GGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDINGN------HVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTEIHSI 855
            FSC +  SL    +  L  +N+A  T  + T+F        +L   GDA   + G + L++ V    +  G+ALYS P+      T + A         IT  N  ++  GLAF I P   +  S   GG LG+ D K     +  VAVE DT  + ++    GN      H+G+D+NS+ S     + T+   L++    N  I ++G T   ++ V Y  ++     LS  + L   V +++ +GFS ST      H I
Sbjct:    6 FSCILSISLTF-FILLLNKVNSAETTSFSITKF---VPDQKNLIFQGDAKTASTGKLELSKAVK---NSIGRALYSAPIHIWDSKTGSVANFQTTFTFTITAPNTYNVADGLAFFIAPIDTKPKSIHHGGYLGVFDSKTYKKSIQTVAVEIDTFYNAQWDPNPGNISSTGRHIGIDVNSIKS-----ISTVPWSLENNKKANVAIGFNGATNVLSVDVEYPLIRHYT--LSHVVPLKDVVPEWVRIGFSSSTGAEYSAHDI 252          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC_LENCT (Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 9.205e-14
Identity = 67/261 (25.67%), Postives = 120/261 (45.98%), Query Frame = 1
Query:   94 TMLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDINGN-HVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLD----LDQYVNDFMYVGFSGSTQGSTEIHSI 855
            T ++    I  S+ L+ +F  F +N+   T  + T+F   +    +L   GD +   G + LT+ V       G+ALYS P+      T + A         I   +  ++  G  F I P   +  + GG LG+ + K        VAVEFDT  +  +   N   H+G+D+NS+ S     ++T + +L++G+  N  I ++  T    ++++Y N   +  + S+TL+    L   V +++ +GFS +T      H +
Sbjct:    6 TQMISFYLIFLSILLTTIF-FFKVNSTETTSFSITKF---SPDQQNLIFQGDGYTTKGKLTLTKAVK---STVGRALYSTPIHIWDRDTGSVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVNSIKS-----VNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFAAHEV 254          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC_LENCC (Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 67/261 (25.67%), Postives = 119/261 (45.59%), Query Frame = 1
Query:   94 TMLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDINGN-HVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLD----LDQYVNDFMYVGFSGSTQGSTEIHSI 855
            T ++    I  S+ L+ +F  F +N+   T  + T+F   +    +L   GD +   G + LT+ V       G+ALYS P+      T   A         I   +  ++  G  F I P   +  + GG LG+ + K        VAVEFDT  +  +   N   H+G+D+NS+ S     ++T + +L++G+  N  I ++  T    ++++Y N   +  + S+TL+    L   V +++ +GFS +T      H +
Sbjct:    6 TQMISFYLIFLSILLTTIF-FFKVNSTETTSFSITKF---SPDQKNLIFQGDGYTTKGKLTLTKAVK---STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVNSIKS-----VNTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFAAHEV 254          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LECA_SPAPA (Seed lectin alpha chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.202e-13
Identity = 58/186 (31.18%), Postives = 87/186 (46.77%), Query Frame = 1
Query:  313 GKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEKGAGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFS---GSTQGSTEIHSI 855
            G+A YS P+      T   A         I   N ++I  GLAF + P      S GG LGL D   +G  +  VAVEFDT  +  F+D    H+G D+NS+ S     + T+   L +G+     I Y+   +    S+ Y + K    IL+  +DL   + +++ VGFS   G++ G  E H +
Sbjct:   49 GRATYSAPINIWDSATGLVASFATSFRFTIYAPNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVSGSTYQTVAVEFDTYENTVFTDPPYTHIGFDVNSISS-----IKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSF-ILADIVDLSSVLPEWVRVGFSAATGASGGKIETHDV 228          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LEC_LENCO (Lectin OS=Lens culinaris subsp. orientalis PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.570e-13
Identity = 67/261 (25.67%), Postives = 118/261 (45.21%), Query Frame = 1
Query:   94 TMLLFSCKILTSLNLSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNNGSVRLTRDVTVPYDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSLGLLDEK--GAGLGFVAVEFDTLMDVEFSDINGN-HVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLD----LDQYVNDFMYVGFSGSTQGSTEIHSI 855
            T ++    I  S+ L+ +F  F +N+   T  + T+F   +    +L   GD +   G + LT+ V       G+ALYS P+      T   A         I   +  ++  G  F I P   +  + GG LG+ + K        VAVEFDT  +  +   N   H+G+D+NS+ S     + T + +L++G+  N  I ++  T    ++++Y N   +  + S+TL+    L   V +++ +GFS +T      H +
Sbjct:    6 TQMISFYLIFLSILLTTIF-FFKVNSTETTSFSITKF---SPDQQNLIFQGDGYTTKGKLTLTKAVK---STVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDAPSSYNVADGFTFFIAPVDTKPQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNKERHIGIDVNSIKS-----VSTKSWNLQNGERANVVIAFNAATNVLTVTLTYPNSLEEENVTSYTLNEVVPLKDVVPEWVRIGFSATTGAEFAAHEV 254          
BLAST of FC878087 vs. ExPASy Swiss-Prot
Match: LECB_SOPJA (Bark lectin (Fragment) OS=Sophora japonica PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.498e-13
Identity = 69/242 (28.51%), Postives = 114/242 (47.11%), Query Frame = 1
Query:  136 LSLVFCLFVINNAVITISTATEFDFGTLTLASLKLLGDAHMNN-GSVRLTR-DVTVP-YDGAGKALYSKPVRFRLPGTHTPAXXXXXXXXXITNLNPSSIGAGLAFVITPDGEQVGSAGGSL-GLLDEKGAGLGF--VAVEFDTLMDVEFSDINGNHVGLDLNSMVSTQVVNLDTINVDLKSGDLVNSWIEYDGLTRAFNISVSYSNLKPKVPILSFTLDLDQYVNDFMYVGFSGSTQGSTE 843
            +S+ F L ++N        +  F         L L GDA +++ G ++LT  +  VP ++  G+ALY  PV      T   A         +     S    G+AF + P   Q+  AGG L GL +       +  VAVEFDT  +    D N  H+G+D+NS+ ST+     T+    ++G++ N  I Y   T    +S++Y + +    ILS  +DL   + +++ VGF+ +T  +T+
Sbjct:    1 ISITFFLLLLNKVNSAEILSFSFPKFVSNQEDLLLQGDALVSSEGELQLTTVENGVPVWNSTGRALYYAPVHIWDNSTGRVASFATSFSFVVKAPVASKSADGIAFFLAPLNNQIHGAGGGLYGLFNSSSYSSSYQIVAVEFDTHTNAW--DPNTRHIGIDVNSVKSTK-----TVTWGWENGEVANVLITYQAATEMLTVSLTYPSNQTSY-ILSAAVDLKSILPEWVRVGFTATTGLTTQ 234          
The following BLAST results are available for this feature:
BLAST of FC878087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
LEC_BAUPU1.420e-1429.46Lectin OS=Bauhinia purpurea PE=1 SV=2[more]
LEC1_PSOTE1.420e-1432.42Basic agglutinin OS=Psophocarpus tetragonolobus GN... [more]
LEC2_CLALU4.132e-1429.67Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1[more]
LRKA3_ARATH7.048e-1428.90Lectin-domain containing receptor kinase A4.3 OS=A... [more]
LEC2_MEDTR7.048e-1428.74Truncated lectin 2 OS=Medicago truncatula GN=LEC2 ... [more]
LEC_LENCT9.205e-1425.67Lectin OS=Lens culinaris subsp. tomentosus PE=3 SV... [more]
LEC_LENCC1.202e-1325.67Lectin OS=Lens culinaris subsp. culinaris PE=3 SV=... [more]
LECA_SPAPA1.202e-1331.18Seed lectin alpha chain OS=Spatholobus parviflorus... [more]
LEC_LENCO1.570e-1325.67Lectin OS=Lens culinaris subsp. orientalis PE=3 SV... [more]
LECB_SOPJA3.498e-1328.51Bark lectin (Fragment) OS=Sophora japonica PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA76CA01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA76CA01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878087 ID=FC878087; Name=FC878087; organism=Citrus clementina; type=EST; length=885bp
CTCTCTCTCACTCACTCAAAAATCTCGTGAGAATTTAATCTTCTTCTTCA
AAAAACAAATAGTAACCAATGAGCTTCCGCCATTTCTAATTAGACAATGT
TGCTATTTTCTTGCAAAATTTTGACGTCTCTTAACCTATCTCTCGTGTTT
TGTCTCTTCGTCATCAACAATGCTGTAATAACAATCTCCACCGCAACTGA
ATTCGACTTCGGCACTTTAACTTTAGCCAGCTTAAAGCTTCTGGGTGACG
CCCACATGAACAATGGGAGCGTGCGCCTCACTCGTGACGTCACCGTCCCC
TACGACGGCGCCGGCAAGGCCCTCTACTCCAAACCAGTCAGATTCCGGCT
GCCCGGGACTCACACCCCGGCGAGCTTCTCGACCTTCTTCTCCTTCTCAA
TAACCAACCTCAACCCGTCCTCGATAGGCGCCGGGCTTGCATTCGTCATC
ACTCCGGACGGCGAGCAGGTCGGCTCAGCCGGCGGCTCGCTGGGGCTTCT
AGACGAGAAAGGGGCCGGGTTGGGGTTCGTTGCAGTGGAATTTGACACTT
TAATGGACGTTGAGTTCAGTGACATTAATGGAAACCACGTGGGTTTGGAT
CTAAACAGTATGGTTTCTACTCAGGTTGTTAATTTGGATACCATAAATGT
TGATCTTAAGAGCGGCGATCTTGTGAATTCTTGGATTGAATACGACGGAT
TGACTCGGGCTTTTAATATATCCGTTTCGTATTCTAATTTAAAGCCGAAA
GTTCCAATTTTGTCCTTCACTCTTGATCTAGATCAATACGTCAATGATTT
TATGTACGTTGGATTCTCTGGGTCAACTCAAGGAAGTACAGAGATTCACA
GTATAGAATGGTGGAGTTTTTAGTCATCATTTGAG
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