FC878090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: PDF2_ARATH (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana GN=PDF2 PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 2.177e-95 Identity = 180/297 (60.61%), Postives = 223/297 (75.08%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLI 893 VTW+EH E D+ VH +YKPL+ SG+ FGA+RWVATL+RQCE LA M++++ + GR+SMLKLA+RM +FC+GV AST H W ++ D DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE R EWDILSNGG +QEMAHIA G + GNCVSLLR ++ N++QS+MLILQE+CTDA+GS V+YAPVDI AM+VV++GGD YVALLPSGFAI+PDG S G LLTVAFQILV+S+PTAKL++ SV TVN+LI Sbjct: 431 VTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMASNIPGDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLILQESCTDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDG--SVGGGDGNQHQEMVSTTSSGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLI 724
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: ATML1_ARATH (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 1.080e-94 Identity = 185/309 (59.87%), Postives = 225/309 (72.82%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG-GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG-----------PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLI 893 VTWVEH E D+ VH +YKPL+ +G+ FGA+RWVATL RQCE LA M++++ A D + IT+ GR+SMLKLA+RM +FC GV AST H W L+ D DVRVMTRKS+DDPG PPGIVLSAATS W+PV+P+R+F+FLRDE RSEWDILSNGG +QEMAHIA G+D GN VSLLR ++ N+ QS+MLILQE+CTDA+GS V+YAPVDI AM+VV++GGD YVALLPSGFAI+PDG G LLTVAFQILV+S+PTAKL++ SV TVN+LI Sbjct: 439 VTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVATLDRQCERLASSMASNIPACDLSVITSPEGRKSMLKLAERMVMSFCTGVGASTAHAWTTLSTTGSD-DVRVMTRKSMDDPGRPPGIVLSAATSFWIPVAPKRVFDFLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNSVSLLRVNSGNSGQSNMLILQESCTDASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEGGGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLI 746
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HDG7_ARATH (Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 5.548e-91 Identity = 174/298 (58.39%), Postives = 215/298 (72.15%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLIS 896 VTW+EH+EY+ES H LY+PL+ S +G GA +W+ATLQRQCE +L+S+ DHT ++ G +S+LKLAQRM NF +G+ AS +HKW KL A NV +D R++TRKS+ EP GIVLSAATS+WLPV+ QRLF FL D + R++WDILSNG M+ + KGQ G+CVSLLRA+ + N+SSMLILQET D +G+LVVYAPVDIP+M+ VM+GGDSAYVALLPSGF+I+PDG S LLTV FQILVNSLPTAKL VESVETVNNLI+ Sbjct: 384 VTWIEHSEYEESHTHSLYQPLLSSSVGLGATKWLATLQRQCESFTMLLSSE----DHTGLSHAGTKSILKLAQRMKLNFYSGITASCIHKWEKLLAENVGQDTRILTRKSL----EPSGIVLSAATSLWLPVTQQRLFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLRAAGNDQNESSMLILQETWNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSS-----DQFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIA 668
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: ROC8_ORYSJ (Homeobox-leucine zipper protein ROC8 OS=Oryza sativa subsp. japonica GN=ROC8 PE=2 SV=2) HSP 1 Score: 284.263 bits (726), Expect = 6.584e-76 Identity = 157/309 (50.81%), Postives = 210/309 (67.96%), Query Frame = 3 Query: 3 VTWVEHAEYDE-SQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTA-ITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDG---------PDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLIS 896 VTWVEH E +E S ++ LY+ L++SG FGA RW+A LQR CE A L++ V H A +T G+RSM+KL+QRM ++FC+ + AS +H+W L+ N + VRV +S D PG+P G+VLSAATS+WLPV +F F+RDE RS+WD+LS+G +QE++ I G + GNC+SLLR +NA+Q+SMLILQE+CTDA+GSLVVY+P+DIPA +VVM+G D + + LLPSGF I+PDG S GPLA ++TVAFQILV+SLP++KL ESV TVN LI+ Sbjct: 394 VTWVEHMEVEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVP--HHIAGVTPEGKRSMMKLSQRMVNSFCSSLGASQMHQWTTLSGSN-EVSVRVTMHRSTD-PGQPNGVVLSAATSIWLPVPCDHVFAFVRDENTRSQWDVLSHGNQVQEVSRIPNGSNPGNCISLLR--GLNASQNSMLILQESCTDASGSLVVYSPIDIPAANVVMSGEDPSSIPLLPSGFTILPDGRPGSAAGASTSSAGPLA-----AARGGGGGGAGGGSVVTVAFQILVSSLPSSKLNAESVATVNGLIT 691
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HDG12_ARATH (Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 2.679e-69 Identity = 137/303 (45.21%), Postives = 197/303 (65.02%), Query Frame = 3 Query: 3 VTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAG--GRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDE-DVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTD-AAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLIS 896 VTWVEH E++E + +H+++K ++ G+ FGA+RW+ATLQR CE L+ + S+ D + G+RS+++LA RM NFC V T + +DE +RV + KS EP G+VL AATS WLP+SPQ +FNFL+DER R +WD+LSNG +QE+AHI G + GNC+S+LR +++Q++MLILQE+C D ++ +LV+Y PVD+PA+++ M+G D++Y+ +LPSGFAI PDG G L+TV FQI+V+ L AKL +ES+ETVNNLI+ Sbjct: 394 VTWVEHGEFEEQEPIHEMFKDIVHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVSNFCLSV--GTSNNTRSTVVSGLDEFGIRVTSHKSRH---EPNGMVLCAATSFWLPISPQNVFNFLKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQESCIDSSSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAISPDGSSKGG--------------------GSLITVGFQIMVSGLQPAKLNMESMETVNNLIN 671
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HGL2_ARATH (Homeobox-leucine zipper protein GLABRA 2 OS=Arabidopsis thaliana GN=GL2 PE=2 SV=3) HSP 1 Score: 260.766 bits (665), Expect = 7.796e-69 Identity = 134/299 (44.82%), Postives = 195/299 (65.22%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITA-GGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLIS 896 VTWVEH + S V L++ L+ +G+ FGA+ WVATLQ CE L M+T+V +D +T GR+S+LK+AQRMT +F + AS+ H+W K+ +D+RV +RK++ DPGEP G+++ A++S+WLPVSP LF+F RDE R EWD LSNG +Q +A+++KGQD GN V++ + + + S+ +LQ++ T++ S+VVYAPVDI +V+ G D + + +LPSGF+I+PDG +SR PL LLT+A Q L+N P AKL +ESVE+V NL+S Sbjct: 444 VTWVEHLDVSASTVQPLFRSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVTTLAGRKSVLKMAQRMTQSFYRAIAASSYHQWTKITT-KTGQDMRVSSRKNLHDPGEPTGVIVCASSSLWLPVSPALLFDFFRDEARRHEWDALSNGAHVQSIANLSKGQDRGNSVAI---QTVKSREKSIWVLQDSSTNSYESVVVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESR-PLV-----ITSTQDDRNSQGGSLLTLALQTLINPSPAAKLNMESVESVTNLVS 732
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HDG11_ARATH (Homeobox-leucine zipper protein HDG11 OS=Arabidopsis thaliana GN=HDG11 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 6.599e-68 Identity = 146/301 (48.50%), Postives = 190/301 (63.12%), Query Frame = 3 Query: 3 VTWVEHAEYDESQ-VHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARD--HTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQS-SMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLI 893 VTWVEH E +E + VH+LY+ +I G+ FGA RWV TLQR CE A L + S+RD ++ G+RSM++LAQRM N+C V S N + V E V R + EP G VL AAT+ WLP SPQ +FNFL+DER R +WD+LSNG +QE+AHI+ G GNC+S+LR S NA S +MLILQE+ TD++G+ VVY+PVD+ A+++ M+G D +Y+ LL SGF I PDG S L+TV FQI+V++LPTAKL +ESVETVNNLI Sbjct: 414 VTWVEHIETEEKELVHELYREIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMISNYCLSVSRS-----NNTRSTVVSELNEVGIRVTAHKSPEPNGTVLCAATTFWLPNSPQNVFNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGS--NATHSNNMLILQESSTDSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNS-----EQGGASTSSGRASASGSLITVGFQIMVSNLPTAKLNMESVETVNNLI 702
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HDG3_ARATH (Homeobox-leucine zipper protein HDG3 OS=Arabidopsis thaliana GN=HDG3 PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 3.389e-64 Identity = 134/301 (44.52%), Postives = 186/301 (61.79%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMST---SVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMN-GGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNNLI 893 VTWVEH E D++ + +++ LI +G F A RWV TL RQCE ++ ++ST SV + DH +T G+ SMLK+A+R+ F AG+ +T + + +G ED+RVMT KSV+DPG+PPG+++ AATS WLP P +F+FLR+ R WD+L NG M ++A I G D NC SLLR + ++S M+I+QET TD S V+YAPVD+ +M + ++ GGD +V +LPSGFAI PDG G LLT++FQ+LV S P A+L+V SV T NLI Sbjct: 430 VTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNAT---GSTIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLRHG--HTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPG----------------GKEGGSLLTISFQMLVESGPEARLSVSSVATTENLI 709
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: FWA_ARATH (Homeobox-leucine zipper protein HDG6 OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 7.067e-62 Identity = 135/296 (45.61%), Postives = 183/296 (61.82%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKL---TVESVETV 881 VTW+E AEY+ES +HQLY+PLI G+G GA+RW+ATLQR CE L+ L ST+++ ++A G ++KLAQRMT N+ G+ + +V KW K+ NV +++ M RK+V++PGE GIVLSA+TSVWLPV+ LF F+ R EWDIL+N M+E I K + HGN +SLL+ + ML+LQE DA+G++VVYAPV+ ++ +V G +S V LPSGF+IVPDG + LLT QILV PTA L TV+SVET+ Sbjct: 394 VTWIEQAEYNESHIHQLYQPLIGYGIGLGAKRWLATLQRHCESLSTLSSTNLTEIS-PGLSAKGATEIVKLAQRMTLNYYRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFAFISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKIV-----NNGMLVLQEIWNDASGAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSIVPDGVNG-------------SYHRGNTGGGCLLTFGLQILVGINPTAALIQGTVKSVETL 670
BLAST of FC878090 vs. ExPASy Swiss-Prot
Match: HDG5_ARATH (Homeobox-leucine zipper protein HDG5 OS=Arabidopsis thaliana GN=HDG5 PE=2 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 1.427e-54 Identity = 116/296 (39.19%), Postives = 174/296 (58.78%), Query Frame = 3 Query: 3 VTWVEHAEYDESQVHQLYKPLIISGMGFGAQRWVATLQRQCECLAILMSTSVSARDHTAITAGGRRSMLKLAQRMTDNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQRLFNFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRAS-AINANQSSMLILQETCTDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXXLLTVAFQILVNSLPTAKLTVESVETVNN 887 V WVEH E DE VH+ + + SGM FGA RW+ LQRQCE +A LM+ +++ + +A RR++++L+QR+ FC + + W L+ D VR+ TRK + PG+P G+VL A ++ WLP S ++F+ +RD+ +S ++L NG E+AHIA G GNC+SLLR + A N+ + L+LQE+C D +GSL+VY+ VD+ ++ MNG DS+ + +LP GF+IVP P LLTV Q+L +++PTAK + +V T+NN Sbjct: 507 VKWVEHVEVDEKHVHETFAEYVKSGMAFGANRWLDVLQRQCERIASLMARNITDLGVIS-SAEARRNIMRLSQRLVKTFCVNISTAYGQSWTALSETTKDT-VRITTRKMCE-PGQPTGVVLCAVSTTWLPFSHHQVFDLIRDQHHQSLLEVLFNGNSPHEVAHIANGSHPGNCISLLRINVASNSWHNVELMLQESCIDNSGSLIVYSTVDVDSIQQAMNGEDSSNIPILPLGFSIVPVNPPE------------GISVNSHSPPSCLLTVGIQVLASNVPTAKPNLSTVTTINN 787 The following BLAST results are available for this feature:
BLAST of FC878090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878090 ID=FC878090; Name=FC878090; organism=Citrus clementina; type=EST; length=898bpback to top |