FC878092

Overview
NameFC878092
Unique NameFC878092
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length940
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.101e-20
Identity = 57/121 (47.11%), Postives = 74/121 (61.16%), Query Frame = 3
Query:   69 ASVAMRSWMMIIGIAFALGSIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTG 431
            +S+  R  ++ + + F  G  +   +  A FVFGDSLV+ GNNNYLAT A+A+  P GIDF +  PTGRF+NG  I DII Q +G  E   PYL+P   G  +L GAN+A  G G LN  G
Sbjct:    2 SSLVSRCQVIALLVLFFFGVCLAGKDIPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDFGS--PTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSGPLNSPG 120          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL71_ARATH (GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana GN=At5g03610 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.894e-19
Identity = 70/242 (28.93%), Postives = 119/242 (49.17%), Query Frame = 3
Query:  159 FVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQ-RLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPALEQMLQEINRKIGQTVFI 881
            FVFGDS  D+GN     +++     PYGI FP  +P GRFS+G    D +++ +G  ++P+PY   +  G+ RL  G NFA  G G+ N        +  M  Q+D F           G       +  ++ L++V GND+ N    +  +  + +F  P ++K ++ +    L R++ LG +++ V    PLGC+P       S   C+       +L+N  L+Q++ ++N +  Q+ FI
Sbjct:   45 FVFGDSYADTGNIKKAFSSSWKF--PYGITFPG-KPAGRFSDGRVATDFLAKFVG-IKSPIPYFWKDYAGKKRLQYGMNFAYGGTGVFNTQ----TPLPNMTTQIDIFQNI-----LTTGDIYYPPELTSSVALVSVAGNDYSN---FIALNRPASEF--PAFIKQVVDQTEVNLRRIHALGVKKIAVPSLQPLGCLP-PFTFVTSFQRCNETQNALVNLHNNLLQQVVAKLNNETKQSTFI 267          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.260e-16
Identity = 87/324 (26.85%), Postives = 137/324 (42.28%), Query Frame = 3
Query:   33 RNNMSMAIATSSASVAMRSWMMIIGIAFALG-SIVRLAEARAFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELN--GQRLLIGANFASAGIGIL--NDT----GIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNR------ALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGS-------NGGCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            ++N+  A    S++V   SW+++   A     S+       A + FGDS  D+G    ++        PYG  F  HRPTGR S+G    D I++R+G     LPYLS  LN  G     GANFA+ G  I   N+T    GI   ++     Q D F      +   I ++  R+ + R      AL    +G ND    +  +  S    + T+P+ V ++ S  R +    Y+ G R   V  TGP GC+P  +   G+         GC          +N  L++ +  + +++ Q      +      + +SNP   G
Sbjct:    2 KDNLERAKLMVSSTVF--SWLLLCLFAVTTSVSVQPTCTFPAIYNFGDSNSDTGG---ISAAFEPIRDPYGQGF-FHRPTGRDSDGRLTIDFIAERLG-----LPYLSAYLNSLGSNFRHGANFATGGSTIRRQNETIFQYGISPFSLDMQIAQFDQFKARSALLFTQIKSRYDREKLPRQEEFAKALYTFDIGQNDLSVGFRTM--SVDQLKATIPDIVNHLASAVRNI----YQQGGRTFWVHNTGPFGCLPVNMFYMGTPAPGYLDKSGCVKAQNEMAMEFNRKLKETVINLRKELTQAAITYVDVYTAKYEMMSNPKKLG 308          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL83_ARATH (GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana GN=At5g45910 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.254e-16
Identity = 89/314 (28.34%), Postives = 136/314 (43.31%), Query Frame = 3
Query:   96 MIIGIAFALGSIVRLAEAR------AFFVFGDSLVDSGNNNYLATTARADAP-----PYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQR------LLIGANFASAG-----IGILNDTGIQFVNIIR--MFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLI-TVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGG--------CSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            M+  +AF+    VR    R      + F FGDSL D+GN      +   D+P     PYG  F  +R TGR S+G  I D I++  G     LPY+ P L   R         GANFA AG          + G+    +    +  QLD+F + +  +       +  Q   ++L L+  +GGND+  NY L+ + +      L   V ++I++   +   L E GA  ++V G  P+GC  A L     N G        C   L     L+N  L++ L  + +K      I A+   + M F ++P+ YG
Sbjct:    5 MLFIVAFSFLVSVRSLPMRPTLKYESIFNFGDSLSDTGN---FLLSGDVDSPNIGRLPYGQTF-FNRSTGRCSDGRLIIDFIAEASG-----LPYIPPYLQSLRTNDSVDFKRGANFAVAGATANEFSFFKNRGLSVTLLTNKTLDIQLDWFKKLKPSLCKT--KPECEQYFRKSLFLVGEIGGNDY--NYPLLAFRSFKHAMDL---VPFVINKIMDVTSALIEEGAMTLIVPGNLPIGCSAALLERFNDNSGWLYDSRNQCYMPLNNLAKLHNDKLKKGLAALRKKYPYAKIIYADYYSSAMQFFNSPSKYG 302          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 8.169e-16
Identity = 77/274 (28.10%), Postives = 116/274 (42.34%), Query Frame = 3
Query:  159 FVFGDSLVDSGNNNYLATTARADAPPYGIDFPT-----HRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNR----ALVLITVGGNDFVNNYYLVPYSARSRQFTLP-NYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG----GCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            F FGDS  D+G               Y I FP       R TGR S+G  + D + Q +  S    PYL   L   R   GANFA AG   L       +NI    +Q  +F      +++   + +   + N     AL +I +G ND   ++      AR   ++     +  II+E +  + RLY+ G RR  +  TGPLGC+P +L++  S      GC      A +L+N  L+ M +E+  ++     I  +        I+N   YG
Sbjct:   42 FNFGDSNSDTGG--------LVAGLGYPIGFPNGRLFFRRSTGRLSDGRLLIDFLCQSLNTSLLR-PYLD-SLGRTRFQNGANFAIAGSPTLPKNVPFSLNI--QVKQFSHFKSRSLELASSSNSLKGMFISNNGFKNALYMIDIGQNDIARSF------ARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDLDQHGCLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSNQYG 297          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL2_ARATH (GDSL esterase/lipase At1g09390 OS=Arabidopsis thaliana GN=At1g09390 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.820e-15
Identity = 79/274 (28.83%), Postives = 119/274 (43.43%), Query Frame = 3
Query:  159 FVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLV-------NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYI---ISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG----GCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            F FGDS  D+G    +A    +   P G  F   R TGR S+G  + D + Q +  S    PYL   L G +   GANFA  G   L       +NI     QL  F  ++ R   +       + +         AL +I +G ND  +++        S+  +    VK I   ISE +  +  LY+ G R+  V  TGPLGC+P +L++  S G    GC A    A  L+N  L+ M +++  ++ +   +  +      D I+N   YG
Sbjct:   39 FNFGDSNSDTGG--LVAGLGYSIGLPNGRSF-FQRSTGRLSDGRLVIDFLCQSLNTSLLN-PYLD-SLVGSKFQNGANFAIVGSSTLPRYVPFALNI-----QLMQFLHFKSRALELASISDPLKEMMIGESGFRNALYMIDIGQNDIADSF--------SKGLSYSRVVKLIPNVISEIKSAIKILYDEGGRKFWVHNTGPLGCLPQKLSMVHSKGFDKHGCLATYNAAAKLFNEGLDHMCRDLRTELKEANIVYVDIYAIKYDLIANSNNYG 294          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL21_ARATH (GDSL esterase/lipase At1g54030 OS=Arabidopsis thaliana GN=At1g54030 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 67/242 (27.69%), Postives = 118/242 (48.76%), Query Frame = 3
Query:  147 ARAFFVFGDSLVDSGNNNYLATTARADA--PPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPEL-NGQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPALEQMLQEINRKI 863
            A+  FVFGD L D+GN  +L+   R DA  PPYG+     + TGR+S+G  +PD +++ +G     +P +SP L        GANFA A   +L          + + +Q+  F+E + + +         Q  + A+ LI +G +D+++     P  + +++     +V  +I+  +  +  +Y  G R+       PLGC+PA     G+   C        +L+N  L Q+L E++R++
Sbjct:   50 AQTLFVFGDGLYDAGNKQFLSQN-RVDASFPPYGVT--VGQATGRWSDGSIVPDYLAKFMG-----IPKISPILLTTADFSHGANFAIADATVLGSPP----ETMTLSQQVKKFSENKNKWT--------NQTRSEAIYLIYIGSDDYLSYAKSNPSPSDTQKQA---FVDQVITTIKAEIKVVYGSGGRKFAFQNLAPLGCLPAVKQASGNVQECVKLPSEMAALHNKKLLQLLVELSREL 268          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL1_CARPA (GDSL esterase/lipase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.295e-15
Identity = 70/267 (26.22%), Postives = 123/267 (46.07%), Query Frame = 3
Query:  147 ARAFFVFGDSLVDSGNNNYLATTARADAPPYG--IDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELN-GQRLLIGANFASAGIGILNDTGIQFVNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            A+  F+FGDSL D+GN  +LAT   +   PYG  IDF    P GR+S+G  +PD I++ +G     +P+  P L+       G  FA+A   IL          + +  Q+  FA+ +   S    AQ+      + + +  +G ND++ NY     +A ++Q     +V  +I++ +  L+ +Y LG R+       PLGC+P       +   C        + +N  L + L+ ++  +    +I  +   + +  ++ P  YG
Sbjct:   26 AQQLFIFGDSLYDNGNKPFLATDVPSTFWPYGLSIDF----PNGRWSDGRIVPDFIAEFLG-----IPFPPPVLDRSANFSSGVTFATADATILGTP----PQTLTLGDQVKAFAQIK---STWTDAQR-----QKGIYMFYIGANDYL-NYTNANLNATAQQ--QEAFVSQVIAKLKDQLLAIYGLGGRKFAFQNLAPLGCLPIVKQDFKTGNFCLPLASNLAAQHNQLLSETLENLSETLDGFNYIIYDYFNSSLRRMARPNNYG 268          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.541e-14
Identity = 73/279 (26.16%), Postives = 118/279 (42.29%), Query Frame = 3
Query:  153 AFFVFGDSLVDSGNNNYLATTARADAPPYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELN--GQRLLIGANFASAGIGILNDTGIQ---------FVNI-IRMFRQLDYFAEYQRRVSAVIGAQQARQLV-NRALVLITVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELA----LRGSNGGCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            A F FGDS  D+G     A       PPYG  F  HR TGR+S+G  I D I++        LPYLSP L+  G     GA+FA+AG  I   T I          ++++    FRQ    +++ R    +       +    +AL    +G ND    +  +  +      T+P+ V    +  +K+    Y+LGAR   +  TGP+GC+   L         + GC+         +N  L++++ ++ + +    F+  +         S P  +G
Sbjct:   34 AIFNFGDSNSDTGGK---AAAFYPLNPPYGETF-FHRSTGRYSDGRLIIDFIAESFN-----LPYLSPYLSSLGSNFKHGADFATAGSTIKLPTTIIPAHGGFSPFYLDVQYSQFRQFIPRSQFIRETGGIFAELVPEEYYFEKALYTFDIGQNDLTEGF--LNLTVEEVNATVPDLVNSFSANVKKI----YDLGARTFWIHNTGPIGCLSFILTYFPWAEKDSAGCAKAYNEVAQHFNHKLKEIVAQLRKDLPLATFVHVDIYSVKYSLFSEPEKHG 297          
BLAST of FC878092 vs. ExPASy Swiss-Prot
Match: GDL6_ARATH (GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.482e-14
Identity = 78/283 (27.56%), Postives = 124/283 (43.82%), Query Frame = 3
Query:  150 RAFFVFGDSLVDSGNNNYLATTARADAP-----PYGIDFPTHRPTGRFSNGFNIPDIISQRIGQSEAPLPYLSPELNGQRLLIGANFASAGI-----GILNDTGIQF-VNIIRMFRQLDYFAEYQRRVSAVIGAQQARQLVNRALVLI-TVGGNDFVNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG--------GCSAELQRATSLYNPALEQMLQEINRKIGQTVFIAANTPQTHMDFISNPTAYG 938
            ++   FGDS+ D+GN   LA +   + P     PYG  F  H PTGRFSNG  I D I++ +G    P  Y S   N ++   G NFA  G        L + GI F    + +  QL  F E     +  +     R ++  +L+L+  +GGND+ N  + V  +    +  +P  ++ I S   +L+     +G +  LV G  PLGC  A L+L  ++         GC   L + +  ++  L+  L  + +       I A+   T +     P  +G
Sbjct:   33 KSIISFGDSIADTGN--LLALSDPTNLPKVAFLPYGETF-FHHPTGRFSNGRLIIDFIAEFLGFPLVPPFYGSQNANFEK---GVNFAVGGATALERSFLEERGIHFPYTNVSLAVQLSSFKE--SLPNLCVSPSDCRDMIENSLILMGEIGGNDY-NYAFFVGKNIEEIKELVPLVIETISSAITELI----GMGGKTFLVPGEFPLGCSVAYLSLYQTSNIEEYDPLTGCLKWLNKFSEYHDEQLQAELNRLQKLYPHVNIIYADYYNTLLRLAQEPAKFG 302          
The following BLAST results are available for this feature:
BLAST of FC878092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
GDL63_ARATH1.101e-2047.11GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GDL71_ARATH7.894e-1928.93GDSL esterase/lipase At5g03610 OS=Arabidopsis thal... [more]
GDL76_ARATH1.260e-1626.85GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL83_ARATH6.254e-1628.34GDSL esterase/lipase At5g45910 OS=Arabidopsis thal... [more]
LIP4_ARATH8.169e-1628.10GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GDL2_ARATH1.820e-1528.83GDSL esterase/lipase At1g09390 OS=Arabidopsis thal... [more]
GDL21_ARATH5.295e-1527.69GDSL esterase/lipase At1g54030 OS=Arabidopsis thal... [more]
GDL1_CARPA5.295e-1526.22GDSL esterase/lipase OS=Carica papaya PE=1 SV=1[more]
EST_HEVBR1.541e-1426.16Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL6_ARATH4.482e-1427.56GDSL esterase/lipase At1g28570 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA42CH04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42CH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878092 ID=FC878092; Name=FC878092; organism=Citrus clementina; type=EST; length=940bp
AGAGTATATATCCATATATCTAATTAGAGTTTCGAAACAATATGTCAATG
GCTATTGCGACTTCATCGGCATCAGTAGCAATGCGTTCTTGGATGATGAT
TATTGGCATTGCATTTGCTTTAGGATCAATTGTTCGTCTTGCTGAGGCTC
GAGCTTTCTTCGTGTTTGGCGATTCACTCGTCGACAGCGGCAACAACAAC
TACCTCGCCACGACTGCCCGTGCAGACGCGCCGCCTTATGGGATTGATTT
TCCTACTCACCGTCCCACAGGCCGTTTCTCCAATGGCTTCAACATCCCTG
ACATTATCAGTCAGAGAATTGGCCAATCGGAAGCCCCATTGCCATACTTG
AGTCCAGAACTCAATGGACAGAGACTGCTCATTGGTGCCAACTTCGCTTC
AGCGGGAATTGGAATTCTCAATGACACCGGCATCCAATTTGTAAACATAA
TTAGAATGTTCAGACAATTGGATTACTTCGCGGAGTACCAGCGTCGAGTG
AGTGCTGTCATTGGAGCCCAGCAAGCTCGCCAACTTGTAAACCGAGCACT
AGTACTCATCACTGTCGGTGGCAATGATTTTGTGAATAACTATTACTTGG
TTCCGTACTCTGCAAGATCTCGCCAATTCACTTTGCCCAATTATGTCAAG
TATATCATCTCTGAGTACCGAAAATTATTAATGAGGTTATACGAATTGGG
AGCACGTAGGGTTCTTGTGACGGGTACCGGACCACTGGGTTGTGTTCCAG
CAGAGCTGGCCCTGAGGGGTTCCAACGGTGGATGCTCAGCTGAACTGCAA
AGAGCCACATCCTTGTACAACCCCGCACTCGAACAAATGCTACAAGAAAT
AAACAGAAAAATTGGTCAAACCGTCTTCATTGCCGCAAATACTCCACAGA
CGCACATGGATTTCATAAGCAACCCCACAGCATACGGATT
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