FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_ANADF (Lipoyl synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=lipA PE=3 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 4.798e-52 Identity = 98/192 (51.04%), Postives = 131/192 (68.23%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ ++PGG +Y Q++ ++ L LHTVCEEA CPN+ ECW GG TAT+M++GD CTRGCRFCNVKT ++AEAIA GLDY+V+TSVDRDDL D G+GHFA +R+LK++ P +L+E L PDFRG+ VR V ++ +VFA+N+ETV L VRD +A + Q+L VL K P Sbjct: 8 WLRVNVPGGARYQQVRDTVKGLALHTVCEEAHCPNVAECWGGG-----TATVMLMGDVCTRGCRFCNVKTDAHPPPLDPDEPRHLAEAIAELGLDYIVVTSVDRDDLPDGGAGHFADAIRRLKDI-PQLLVEVLTPDFRGDAEAVRTVGRARPDVFANNLETVRRLTPVVRDLKAGYDQTLAVLARMKREFP 193
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NATPD (Probable lipoyl synthase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=lipA PE=3 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.823e-51 Identity = 98/184 (53.26%), Postives = 130/184 (70.65%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W++ P G ++ +IK+ LR+ L+TVCEEA CPNLG+CWSG + G TAT M+LGD C+RGC FC+V T NVAEA+A GLDYVV+TSVDRDDL D G+GHFA+T+R++K ++L+EAL+PDF+G+ V + + +V AHN+ETVE LQ VRD RA ++QSLDVL Sbjct: 10 WLRTRPPSGRRFTEIKETLRDRDLNTVCEEANCPNLGDCWSGRD-GPGTATFMLLGDRCSRGCNFCDVATG-GMDPLDPDEPANVAEAVAEIGLDYVVLTSVDRDDLDDGGAGHFAETIREIKRRDTSVLVEALIPDFQGDTDAVDRIIDADPDVVAHNVETVERLQWPVRDRRAGYEQSLDVL 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_HALHL (Lipoyl synthase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=lipA PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.218e-48 Identity = 100/201 (49.75%), Postives = 125/201 (62.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K PGG+ Y ++ + + L TVCEE+ CPNLGECWS G TAT M+LG CTR CRFC+V T + AE++ GL YVV+TSVDRDDL D G+ H+AQ VR +K P+ +EAL PDFRG+ VR V SGL VFAHN+E V L VRD RA ++QSL VL +AK P G LT +S+ Sbjct: 44 WLKARAPGGEGYRSVRGIVHDHHLSTVCEESHCPNLGECWSHG-----TATFMVLGSVCTRTCRFCSVDTGNPKGRLDPQEPEHCAESVRLMGLRYVVLTSVDRDDLPDGGAEHYAQCVRAIKADNPDTAVEALTPDFRGDEEAVRTVVDSGLEVFAHNVEVVRRLSPQVRDPRAGYEQSLAVLQVAKRLRP-GVLTKSSL 238
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_THET8 (Lipoyl synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=lipA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.203e-48 Identity = 99/201 (49.25%), Postives = 127/201 (63.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +P G +Y +K +REL+LHTVC+EA CPN+GECW+ G T T+MILGD CTR C+FC V T VAEAIA G+ YVV+TSVDRDDL D G+ HFA T+R +KE P +L+EAL PDF+G+ V V + V+A N+ETV L VRD RA ++Q+L VL AK P LT +S+ Sbjct: 42 WIKAPLPTGPRYQALKAMVRELRLHTVCQEALCPNIGECWTHG-----TLTVMILGDICTRACKFCAVHTGNPKGLVDPEEPRRVAEAIARMGVRYVVLTSVDRDDLPDGGASHFAATIRAIKERAPGVLVEALTPDFQGDLKAVETVLAANPEVYAQNLETVRRLTPKVRDPRAGYEQTLKVLAHAKKVRP-DILTKSSL 236
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_THET2 (Lipoyl synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=lipA PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 4.203e-48 Identity = 99/201 (49.25%), Postives = 127/201 (63.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +P G +Y +K +REL+LHTVC+EA CPN+GECW+ G T T+MILGD CTR C+FC V T VAEAIA G+ YVV+TSVDRDDL D G+ HFA T+R +KE P +L+EAL PDF+G+ V V + V+A N+ETV L VRD RA ++Q+L VL AK P LT +S+ Sbjct: 42 WIKAPLPTGPRYQALKAMVRELRLHTVCQEALCPNIGECWTHG-----TLTVMILGDICTRACKFCAVHTGNPKGLVDPEEPRRVAEAIARMGVRYVVLTSVDRDDLPDGGASHFAATIRAIKERAPGVLVEALTPDFQGDLKAVETVLAANPEVYAQNLETVRRLTPKVRDPRAGYEQTLKVLAHAKKVRP-DILTKSSL 236
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_DEIGD (Lipoyl synthase OS=Deinococcus geothermalis (strain DSM 11300) GN=lipA PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 7.169e-48 Identity = 99/201 (49.25%), Postives = 129/201 (64.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +IP G Y +++K ++E +LHTVCEEA CPN+GECWS G TAT M++G CTR CRFC V T +VAE++ GL YVV+TSVDRDDL D G+ HFA+TV +K P +EAL PDF GN CV V +SG++V+A N+ETV L VRD RA+++++L VL AK P +T TSI Sbjct: 30 WLKVTIPTGQVYGEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHICTRACRFCAVDTGNPMGKLDLEEPAHVAESVRLMGLKYVVLTSVDRDDLPDGGAYHFAKTVTAIKRENPGTRVEALTPDFGGNPHCVDLVLESGVDVYAQNLETVRRLTHPVRDIRASYERTLGVLKHAKQSRP-DVITKTSI 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_SORC5 (Lipoyl synthase OS=Sorangium cellulosum (strain So ce56) GN=lipA PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.597e-47 Identity = 95/189 (50.26%), Postives = 123/189 (65.08%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 830 W+K PGGD Y +K+ R+L LHTVCEEA+CPN+GECW G TAT+M+LGD CTRGCRFC V T +VA AIA L YVV+T V+RDDL D G+ H A+TV +L L+P++LIE LV DF+G+ V V +G +VFAHN+E V + +RD R+++ QSL VL AK+ Sbjct: 10 WLKVRAPGGDTYHHLKETFRKLDLHTVCEEARCPNVGECWREG-----TATVMLLGDVCTRGCRFCAVTTGDPRGAVDVREPEHVARAIARLSLQYVVMTMVNRDDLLDGGAEHVARTVSRLHALRPDLLIETLVGDFQGHMSAVDMVVDAGPDVFAHNVEVVRRITRVIRDVRSSYDQSLAVLRRAKE 193
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_DEIRA (Lipoyl synthase OS=Deinococcus radiodurans GN=lipA PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.724e-47 Identity = 95/201 (47.26%), Postives = 128/201 (63.68%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +IP G + +++K ++E +LHTVCEEA CPN+GECWS G TAT M++G CTR CRFC V T +VA+++ L YVV+TSVDRDDL D G+ HFA+TV+ +KE+ P +EAL PDF GN CV V SG++ +A N+ETV L VRD RA++ ++L VL AK P +T TS+ Sbjct: 33 WLKVTIPTGQVFTEVRKIVKEHRLHTVCEEAMCPNIGECWSRG-----TATFMLMGHICTRACRFCAVDTGNPMGKLDLDEPRSVADSVRLMDLKYVVLTSVDRDDLPDGGAYHFAKTVKAIKEVNPQTRVEALTPDFGGNTACVDLVLDSGVDTYAQNLETVRRLTHPVRDIRASYDRTLSVLAHAKQARP-DVITKTSL 227
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPL (Lipoyl synthase OS=Legionella pneumophila (strain Lens) GN=lipA PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 6.069e-47 Identity = 95/190 (50.00%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 297 YVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 Y Q+K+++++ +L TVCEEAKCPN+ ECWS G TATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G+ V + SGL+VFA N+ETVE L VRD+RA ++Q+L+VL AK Y P LT TS+ Sbjct: 56 YSQVKEQVQKHRLATVCEEAKCPNISECWSHG-----TATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQGSERDVAVLLDSGLDVFAQNVETVERLTHPVRDNRAGYQQTLNVLAFAKKYRP-DVLTKTSL 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPH (Lipoyl synthase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=lipA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.352e-46 Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 297 YVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 Y Q+K+++++ +L TVCEEAKCPN+ ECWS G TATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G+ V + SG++VFA N+ETVE L VRD+RA ++Q+L+VL AK Y P LT TS+ Sbjct: 56 YSQVKEQVQKHRLATVCEEAKCPNISECWSHG-----TATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQGSERDVAVLLDSGVDVFAQNVETVERLTHPVRDNRAGYQQTLNVLAFAKKYRP-DVLTKTSL 239 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |