FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPC (Lipoyl synthase OS=Legionella pneumophila (strain Corby) GN=lipA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.352e-46 Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 297 YVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 Y Q+K+++++ +L TVCEEAKCPN+ ECWS G TATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G+ V + SG++VFA N+ETVE L VRD+RA ++Q+L+VL AK Y P LT TS+ Sbjct: 56 YSQVKEQVQKHRLATVCEEAKCPNISECWSHG-----TATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQGSERDVAVLLDSGVDVFAQNVETVERLTHPVRDNRAGYQQTLNVLAFAKKYRP-DVLTKTSL 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_LEGPA (Lipoyl synthase OS=Legionella pneumophila (strain Paris) GN=lipA PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.352e-46 Identity = 94/190 (49.47%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 297 YVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 Y Q+K+++++ +L TVCEEAKCPN+ ECWS G TATIM++G CTR CRFC+V T N AE +A LDYVV+TSV+RDDL D G+ H+A+T+R +K+ P +EAL PDF+G+ V + SG++VFA N+ETVE L VRD+RA ++Q+L+VL AK Y P LT TS+ Sbjct: 56 YSQVKEQVQKHRLATVCEEAKCPNISECWSHG-----TATIMLMGAVCTRACRFCSVDTGNPHGWLDAEEPENTAETVALMNLDYVVLTSVNRDDLPDGGANHYAKTIRAIKKRSPRTKVEALTPDFQGSERDVAVLLDSGVDVFAQNVETVERLTHPVRDNRAGYQQTLNVLAFAKKYRP-DVLTKTSL 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PSEMY (Lipoyl synthase OS=Pseudomonas mendocina (strain ymp) GN=lipA PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 3.012e-46 Identity = 91/201 (45.27%), Postives = 126/201 (62.69%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W++ PGG ++ +K+ + E +L TVC+E+ CPN+GECWS G TATIM++G CTR CRFC V T N A+++ L Y+V+TSVDRDDL D G+ H+A VR +KE P +++EAL PDF G++ + V SGL VFA N+ETV+ L VRD RA ++++L VL AK + P LT TS+ Sbjct: 46 WLRVKAPGGSRFEAVKRNVGEHRLSTVCQESHCPNMGECWSNG-----TATIMLMGSVCTRACRFCAVDTGNPNGWLDLEEPQNTAKSVELMALRYIVLTSVDRDDLEDGGASHYAACVRAIKENTPQVVVEALTPDFDGDHQAIERVVDSGLEVFAQNVETVKRLTHVVRDPRAGYEKTLKVLEHAKKHRPQ-VLTKTSL 240
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_SULAC (Probable lipoyl synthase OS=Sulfolobus acidocaldarius GN=lipA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 5.138e-46 Identity = 93/187 (49.73%), Postives = 124/187 (66.31%), Query Frame = 3 Query: 291 DKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL 851 + + ++ + + E + TVCEEA CPN+ ECW G+ TAT MI+GD CTRGCRFC VK + VAEA+ GLDYVVITSVDRDDLAD G+ HF+Q V+ +KE+ P++++E L PDF GN V +V SG++VFAHN+ETV L VRD RA+++QSL VL AK+ V ++ Sbjct: 11 ENFKKLSRIVSEKGISTVCEEALCPNIMECW-----GSGTATFMIMGDICTRGCRFCYVKKGKPVLLDHEEPI-KVAEAVREMGLDYVVITSVDRDDLADGGASHFSQVVKAVKEMNPDVIVEVLTPDFMGNKELVEKVIGSGVDVFAHNVETVRSLTPLVRDARASYEQSLRVLSYAKNVVKKSSI 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_AERPE (Probable lipoyl synthase OS=Aeropyrum pernix GN=lipA PE=3 SV=2) HSP 1 Score: 182.956 bits (463), Expect = 1.952e-45 Identity = 100/192 (52.08%), Postives = 124/192 (64.58%), Query Frame = 3 Query: 291 DKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 D YV++ + + L + TVCE A CPN+ CW G TAT MI+GDTCTRGCRFC VK VA A+ + GLDYV +TSVDRDDL D G+ HFA TVR +K L+P+ ++EAL+PDF+G VR VA SGL V AHNIETVE L VRD RA ++QSL VL +AK+ G +T +SI Sbjct: 14 DSYVKVARLVAGLGVATVCEGALCPNIFTCW-----GEGTATFMIMGDTCTRGCRFCYVKKG-VPEPLDPLEPYKVALAVDALGLDYVTLTSVDRDDLPDGGASHFAATVRAIKRLRPDTIVEALIPDFQGVEEHVRLVAASGLEVLAHNIETVERLTPLVRDRRAGYRQSLRVLEIAKE---EGVVTKSSI 196
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_MARAV (Lipoyl synthase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=lipA PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 3.330e-45 Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W++ +PGG++Y +++ + E +L TVC+E+ CPN+GECW+ G TATIM++G CTR C+FC V T N A+++ GL Y+V+TSVDRDDL D G+ H+A V +K+ P + +EAL PDF V +V SGL+VFA N+ETV+ L S VRD RA ++++L VL AK + P LT TS+ Sbjct: 46 WLRARMPGGERYDAVRRNVTEHRLSTVCQESHCPNIGECWTNG-----TATIMVMGSVCTRACKFCAVDTGNPKGWLDPEEPENTAKSVELMGLRYIVLTSVDRDDLPDGGAAHYAACVSAIKQRTPEVAVEALTPDFDAVMSDVEKVVDSGLDVFAQNVETVKRLTSRVRDPRAGYEKTLSVLAHAKKHRP-DVLTKTSL 240
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_MYXXD (Lipoyl synthase OS=Myxococcus xanthus (strain DK 1622) GN=lipA PE=3 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.653e-44 Identity = 89/201 (44.28%), Postives = 127/201 (63.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +P G+ Y ++K ++ KL TVCEEA+CPN+ ECW GG TAT+M++G+ CTR CRFC+VK A ++A+A+ L+Y+V+TSV+RDD D G+ HFA +R+L+ P ++E L+PDF+G + VA++ +V AHN+ETVE L VRD RA + QSL VL K+ P G T TS+ Sbjct: 10 WLKVRLPHGEGYERVKAIVKRTKLATVCEEARCPNIAECWGGG-----TATVMLMGEVCTRACRFCHVKVG-APPPLDPMEPIHLAQAVKEMDLEYIVVTSVNRDDRPDGGASHFASAIRELRRESPRTIVEVLIPDFKGVEKDLTTVAEAKPHVVAHNVETVERLTPTVRDRRAKYHQSLRVLEYLKNR-PEGLYTKTSV 203
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATW (Lipoyl synthase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATT (Lipoyl synthase OS=Francisella tularensis subsp. tularensis GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATO (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |