FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATN (Lipoyl synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATM (Lipoyl synthase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATH (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRATF (Lipoyl synthase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRAT1 (Lipoyl synthase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=lipA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.202e-44 Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ KL TVCEEA+CPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ GL+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G N + ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVQKQDSKEYLKVKSITKKHKLSTVCEEARCPNINECWSHG-----TATIMLMGSVCTRACKFCSVDTGNPKGWLDKDEPMNAAESVKLMGLEYVVLTSVDRDDLEDGGAGHYAATITAIKNLDENIKVEALTPDFAGINENIDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLNFLKYVKQKSP-NVLTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_SULSO (Probable lipoyl synthase OS=Sulfolobus solfataricus GN=lipA PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.071e-43 Identity = 87/187 (46.52%), Postives = 123/187 (65.78%), Query Frame = 3 Query: 291 DKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTL 851 + + ++ + +++ + TVCEEA CPN+ ECW G+ TAT MI+G CTRGCRFC V + VAEA+ LDYVVITSVDRDDL+D G+ HFA V+ +KEL P +++E L PDFRGN V++V +G++VFAHN+ETV L VRD RA+++QSL+VL A++ + ++ Sbjct: 13 ENFKRVAEIVKKKSIATVCEEALCPNIMECW-----GSGTATFMIMGSICTRGCRFCYVLKGKPSPLDDEEPK-RVAEAVKEMELDYVVITSVDRDDLSDGGAQHFANVVKTVKELNPGIIVEVLTPDFRGNIDAVKKVIDAGVDVFAHNVETVRRLTPIVRDPRASYEQSLNVLKYAENVIKKSSI 193
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_ALHEH (Lipoyl synthase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=lipA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.069e-43 Identity = 88/201 (43.78%), Postives = 120/201 (59.70%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W++ +P G+ Y ++ +R +L TVCEE+ CPN+GECW+ G TATIM++G CTR CRFC V T + A+++ GL YVV+TSVDRDDL D G+GH+A V ++E+ P +E L PDF G V V + VFA N+ETV L VRD RA ++Q+L+VL +AK P LT TS+ Sbjct: 45 WLRARVPSGEGYQAVRDIVRTHRLSTVCEESHCPNIGECWNAG-----TATIMLMGAVCTRACRFCAVDTGNPKGRLDHDEPAHAADSVRLMGLSYVVLTSVDRDDLEDGGAGHYAACVNAIREVNPETAVEVLTPDFNGVPEHVHRVVDARPEVFAQNVETVRRLTHPVRDPRAGYEQTLEVLRLAKARRP-DMLTKTSL 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_FRAP2 (Lipoyl synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=lipA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.020e-42 Identity = 90/201 (44.78%), Postives = 121/201 (60.20%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K +Y+++K ++ +L TVCEEAKCPN+ ECWS G TATIM++G CTR C+FC+V T N AE++ L+YVV+TSVDRDDL D G+GH+A T+ +K L N+ +EAL PDF G V ++ + ++V A NIETVE L VRD RA + Q+L+ L K P LT TSI Sbjct: 45 WLKVKKQDSKEYLKVKSITKKHRLSTVCEEAKCPNINECWSHG-----TATIMLMGAVCTRACKFCSVDTGNPKGWLDKEEPQNTAESVKLMNLEYVVLTSVDRDDLVDGGAGHYAATITAIKNLDENIKVEALTPDFAGVKENVDKIINTKVDVIAQNIETVERLTHPVRDPRAGYWQTLEFLRYVKQKSP-NILTKTSI 239
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PYRAR (Probable lipoyl synthase OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=lipA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.639e-42 Identity = 85/189 (44.97%), Postives = 116/189 (61.38%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 830 W++ + +++ L L ++TVCE A+CPN+ CW G TAT MILG+ CTR CRFC+V+T VAEA+ GL YVV+TSVDRDDL D G+ +A +R+++ L P L+E L PDFRG+ V VA++G +VFAHN+ETV L VRD RA+++ SL VL AK+ Sbjct: 7 WLRVEARSYSEMAKVRSVLSRLGVYTVCEGARCPNVFRCW-----GEGTATFMILGEVCTRACRFCSVRTGNPRGYVDLDEPRRVAEAVRRLGLRYVVVTSVDRDDLPDGGAFQYASAIREIRRLAPGALVEVLTPDFRGSREAVETVAEAGPDVFAHNVETVRRLTPLVRDRRASYETSLRVLKTAKE 190
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_ANAPZ (Lipoyl synthase OS=Anaplasma phagocytophilum (strain HZ) GN=lipA PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.003e-41 Identity = 85/189 (44.97%), Postives = 120/189 (63.49%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 830 W++ +PGG+ + +++ ++ +L+TVCEEA CPN+GECW+ ATIM++GD CTR C FCNVKT V EAI+ GL +VVITSVDRDDL D G+ HFA+ +R++++ PN+ IE L PDF+G G V +A + +V+ HN+ETV L + VR RA + SL +L KD Sbjct: 7 WLRVKMPGGEVFEEVRDLVKRQRLNTVCEEAACPNIGECWNKRH-----ATIMVMGDVCTRACAFCNVKTG-VPRALDLGEPERVGEAISKLGLKHVVITSVDRDDLPDGGASHFAKCIREIRKRDPNVTIEILTPDFQGKPGAVDVIASARPDVYNHNLETVPRLYARVRP-RAKYFNSLQLLQQVKD 188 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |