FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_UNCMA (Probable lipoyl synthase OS=Uncultured methanogenic archaeon RC-I GN=lipA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.976e-41 Identity = 86/192 (44.79%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+K +P DKY +K +++ L+TVC A CPN ECW GG T M+LG+TCTR CRFC V A +A A L YVVITSVDRDDL D G+GH+A +R +KE P +EA++PDF G + +V + +V +HNIETVE L +VRD RA + +SLDVL K P Sbjct: 11 WLKVRLPRTDKYGAVKDVIKKYNLNTVCSSAMCPNAFECWDGG-----CLTFMVLGNTCTRACRFCTVTHGPAGEPLDSNEPQRLAAAAKELDLSYVVITSVDRDDLPDYGAGHYAACIRAVKEQLPGARVEAIIPDFTGRLDLLEQVVDARPDVISHNIETVERLSPSVRDRRAGYYRSLDVLRDVKRVNP 197
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PICTO (Probable lipoyl synthase OS=Picrophilus torridus GN=lipA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.499e-41 Identity = 90/186 (48.39%), Postives = 112/186 (60.22%), Query Frame = 3 Query: 270 KESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 K +P G++Y IK L L+TVCEEA CPN+ ECW G TAT MI+G C+RGCRFC V R V E++ LDYVVITSVDRDDL D+GS HFA +R+LK+LK + IE L+PDF G + + ++ +V AHNIETV L VRD RA + QSL+VL K Sbjct: 9 KVKLPSGERYTFIKSTLSARNLYTVCEEAHCPNIAECWESG-----TATFMIMGSNCSRGCRFCAVTHGRMLPLDPMEPE-KVYESVKMMNLDYVVITSVDRDDLPDKGSSHFAAVIRRLKDLK--IKIEVLIPDFSGVHKFIDKIIDERPDVIAHNIETVRRLTKTVRDPRAGYDQSLNVLRYVK 186
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RUBXD (Lipoyl synthase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=lipA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.186e-40 Identity = 89/197 (45.18%), Postives = 119/197 (60.41%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLT 854 W+K +P G Y +IK+ +R L LHTVCEEA+CPN+GECW+ TAT MILG+ CTR C FC V T R VA+A+ GL + VITSV+RD+L D G+ FA T+R ++ P +E L PDF+G+ ++ V + + F HNIETV L AVR +A + +SL+VL AK+ P G LT Sbjct: 36 WLKARVPDGPGYREIKETMRGLSLHTVCEEARCPNIGECWNN-----RTATFMILGNVCTRSCGFCAVLTGRPQELDLEEPY-RVADAVKKMGLRHAVITSVNRDELPDGGASVFAATIRAIRREVPGCAVEVLTPDFKGDRDAIKTVIDARPDTFNHNIETVPRLYPAVRP-QAKYGRSLEVLRYAKELDP-GVLT 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PYRCJ (Probable lipoyl synthase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=lipA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.385e-40 Identity = 85/189 (44.97%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 830 W++ + V +++ + +HT+CEEA CPN+ CW G TAT +ILGD CTR C+FC VKT VAEA+A GL YVVITSVDRDDL D G+ FA V+ +K P +E L PDF G+ V V ++G +V+AHN+ETV L VRD RA++ SL VL MAK+ Sbjct: 6 WIRVKAGDYGRIVAVREAVFAAGVHTICEEAHCPNIFSCW-----GEGTATFLILGDVCTRACKFCAVKTGDPRGFVDPTEPARVAEAVAKLGLRYVVITSVDRDDLPDGGASQFASVVKAVKARAPWAKVEVLTPDFGGSAEAVASVVEAGPDVYAHNLETVRRLTPLVRDRRASYDVSLRVLKMAKE 189
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_BACFN (Lipoyl synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=lipA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 9.385e-40 Identity = 82/184 (44.57%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W+K SI ++Y + K+ + LHT+C +CPN+GECW G TAT MI GD CTR C+FCN +T R T+VAE+IA L + VITSVDRDDL D G+ H+AQT+R++K L P E L+PDF+G V +V K+ + +HN+ETV+ + VR AN+ SL+V+ Sbjct: 12 WLKISIGANERYTETKRIVESHCLHTICSSGRCPNMGECW-----GKGTATFMIAGDICTRSCKFCNTQTGRPLPLDPDEP-THVAESIALMKLSHAVITSVDRDDLPDLGAAHWAQTIREIKRLNPETTTEVLIPDFQGRKELVDQVIKACPEIISHNMETVKRISPQVRS-AANYHTSLEVI 188
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RICBR (Lipoyl synthase OS=Rickettsia bellii (strain RML369-C) GN=lipA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.091e-39 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+K P +Y K ++ LKL+TVCEEA CPN+GECWS AT+MILG CTR CRFCNVKT R +AEA+ GL +VVITSVDRDDL D G+ HFA+ + ++++ PN IE L PDF +G +A + +VF HN+ETV L + +R A + SL +L K P Sbjct: 59 WIKVKAPNSSEYYNTKDLIKNLKLNTVCEEAACPNIGECWSKKH-----ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDFLRKDGAAEIIANAKPDVFNHNVETVPSLYNTIRP-GARYYNSLSLLHNIKKLSP 243
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RICB8 (Lipoyl synthase OS=Rickettsia bellii (strain OSU 85-389) GN=lipA PE=3 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 2.091e-39 Identity = 86/192 (44.79%), Postives = 112/192 (58.33%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+K P +Y K ++ LKL+TVCEEA CPN+GECWS AT+MILG CTR CRFCNVKT R +AEA+ GL +VVITSVDRDDL D G+ HFA+ + ++++ PN IE L PDF +G +A + +VF HN+ETV L + +R A + SL +L K P Sbjct: 7 WIKVKAPNSSEYYNTKDLIKNLKLNTVCEEAACPNIGECWSKKH-----ATVMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLGLKHVVITSVDRDDLEDGGATHFAECISEIRKSSPNTTIEILTPDFLRKDGAAEIIANAKPDVFNHNVETVPSLYNTIRP-GARYYNSLSLLHNIKKLSP 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PYRAE (Probable lipoyl synthase OS=Pyrobaculum aerophilum GN=lipA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.091e-39 Identity = 86/188 (45.74%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 276 SIPGGD--KYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDY 833 S+ GD K + +++ L ++TVCE AKCPN+ CW G TAT MILG+ CTR CRFC V+T + EA+ GL YVV+TSV RDDL D G+ FA V+KL+E+ ++E LVPDF G+ V+ V SG +VFAHN+ETV L VRD RA +++SL VL AK++ Sbjct: 7 SLRAGDYEKIINVRRALSRHGIYTVCEGAKCPNIFHCW-----GEGTATFMILGEVCTRACRFCAVRTGNPRGYVDWGEVDRLVEAVRELGLKYVVVTSVARDDLPDGGASVFAAVVKKLREV--GCVVEVLVPDFGGSPASVKTVVSSGPDVFAHNVETVRRLTPLVRDRRAGYERSLSVLKYAKEF 187
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PSEAE (Lipoyl synthase OS=Pseudomonas aeruginosa GN=lipA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.091e-39 Identity = 93/193 (48.19%), Postives = 121/193 (62.69%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ IP + +IK+ LR+ KLH+VCEEA CPNLGEC+SGG TAT MI+GD CTR C FC+V R TN+A AIA L YVVITSVDRDDL D G+ HFA +R++++L P + +E LVPD+RG E+ A +VF HN+ETV L + R ++F+ SLD+L K VP Sbjct: 47 WIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGG-----TATFMIMGDICTRRCPFCDVGHGRPKPLDVDEP-TNLAIAIADLRLKYVVITSVDRDDLRDGGAQHFADCLREIRKLSPGIQLETLVPDYRGRMDIALEITANEPPDVFNHNLETVPRLYRSSRP-GSDFEWSLDLLQKFKQMVP 232
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PSEAB (Lipoyl synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=lipA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.091e-39 Identity = 93/193 (48.19%), Postives = 121/193 (62.69%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ IP + +IK+ LR+ KLH+VCEEA CPNLGEC+SGG TAT MI+GD CTR C FC+V R TN+A AIA L YVVITSVDRDDL D G+ HFA +R++++L P + +E LVPD+RG E+ A +VF HN+ETV L + R ++F+ SLD+L K VP Sbjct: 47 WIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGG-----TATFMIMGDICTRRCPFCDVGHGRPKPLDVDEP-TNLAIAIADLRLKYVVITSVDRDDLRDGGAQHFADCLREIRKLSPGIQLETLVPDYRGRMDIALEITANEPPDVFNHNLETVPRLYRSSRP-GSDFEWSLDLLQKFKQMVP 232 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |