FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_GEOUR (Lipoyl synthase OS=Geobacter uraniireducens (strain Rf4) GN=lipA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.774e-30 Identity = 75/192 (39.06%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+++ I + ++++ L +L+LHTVC+EA CPN+ EC+ + AT +ILG+ CTR C FCNV T ++ VA A+ L +VVITS RDDL D G+G +AQTV +++ P IE L+PDF G++G + V + ++ HN+ETV L +R A++++SLDVL + D P Sbjct: 9 WLQKKI-SPSAHAEMERLLGDLQLHTVCQEAHCPNISECFRSRQ-----ATFLILGNICTRLCSFCNV-TKQSPHHFDPDEPARVAAAVQKLQLSHVVITSPTRDDLPDGGAGLYAQTVTAIRKAAPQTAIELLIPDFMGDHGSIAAVVAACPDISGHNLETVPRLYH-IRS-GADYRRSLDVLKIIHDLDP 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RALSO (Lipoyl synthase OS=Ralstonia solanacearum GN=lipA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 79/186 (42.47%), Postives = 107/186 (57.53%), Query Frame = 3 Query: 264 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-GLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W++ ++ G ++ +IK LR L TVCEEA CPN+GEC+ G TAT MI+GD CTR C FC+V R N+A+ IA L+YVVITSVDRDDL D G+ H+ + + +EL P IE LVPDFRG ++ ++ +V HN+ETV L R A++ SL +L Sbjct: 52 WIRVKAATGNSRFYEIKDILRANNLVTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDANEPE-NLAKTIAQLRLNYVVITSVDRDDLRDGGAQHYVDCISRTRELSPATRIEVLVPDFRGRLEKALDILQACPPDVMNHNMETVPRLYKQARP-GADYAHSLKLL 230
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RALEJ (Lipoyl synthase OS=Ralstonia eutropha (strain JMP134) GN=lipA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 80/190 (42.11%), Postives = 107/190 (56.32%), Query Frame = 3 Query: 264 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 W++ ++ G ++ +IK LR L TVCEEA CPN+GEC+ G TAT MI+GD CTR C FC+V R N+A IA L+YVVITSVDRDDL D G+ H+ + + +EL P IE LVPDFRG ++ ++ +V HN+ETV L R A++ SL +L K Sbjct: 50 WIRVKAATGNSRFYEIKDILRANNLVTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPG-NLARTIAQLKLNYVVITSVDRDDLRDGGAQHYVDCISQTRELSPATRIEVLVPDFRGRLDKALDILQACPPDVMNHNMETVPRLYKQARP-GADYAHSLKLLQEFK 232
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_GEOBB (Lipoyl synthase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=lipA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 75/193 (38.86%), Postives = 117/193 (60.62%), Query Frame = 3 Query: 264 WM-KESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+ K+ IP + +++ L+EL+L+TVC++A+CPN+ EC+ G AT +ILG CTR C FC+V + +VAEA+ GL +VVITS RDDL D G+ +A+TV +++ + P +E L+PDFRG+ + V +S ++ HN+ETV L S +R A++++SLD+L A+ P Sbjct: 9 WLQKKIIPAA--HAEMEGLLKELRLNTVCQQARCPNITECF-----GKRQATFLILGRICTRLCSFCSV-SKETPLPLEPGEAASVAEAVKRLGLSHVVITSPTRDDLPDGGASVYAETVARIRSVSPATKVELLIPDFRGDWAALAAVVESAPDILGHNLETVPRLYS-IRS-GADYRRSLDLLAQARRMAP 191
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_CUPTR (Lipoyl synthase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=lipA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 80/190 (42.11%), Postives = 107/190 (56.32%), Query Frame = 3 Query: 264 WMK-ESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKS-GLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 W++ ++ G ++ +IK LR L TVCEEA CPN+GEC+ G TAT MI+GD CTR C FC+V R N+A IA L+YVVITSVDRDDL D G+ H+ + + +EL P IE LVPDFRG ++ ++ +V HN+ETV L R A++ SL +L K Sbjct: 53 WIRVKAATGNSRFYEIKDILRANNLVTVCEEASCPNIGECF-----GKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPG-NLARTIAQLKLNYVVITSVDRDDLRDGGAQHYVDCISQTRELSPATRIEVLVPDFRGRLDKALDILQACPPDVMNHNMETVPRLYKQARP-GADYAHSLKLLQEFK 235
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA2_PROMA (Lipoyl synthase 2 OS=Prochlorococcus marinus GN=lipA2 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLN-------------VFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKD 830 W+K S+ + +++ ++E +L+T+CEE +CPN GEC++ G TAT ++ G CTR C FC V+ VA+A+ L YVV+TSV RDDL D G+ HF++T+ +++ P IE L PDF G GC+ ++ + + F HN+ETVE LQ VR A + +SL++L +++ Sbjct: 22 WIKPSLGTASQLEKVQNLVKEYRLNTICEEGRCPNRGECYASG-----TATFLLGGSICTRSCAFCQVEKGMPPQNIDPNESIRVAKAVLKLQLKYVVLTSVARDDLDDHGAIHFSRTIHAIRKTSPTTSIEVLTPDFWG--GCIDKIKATKIQRERLKIVLKAKPVCFNHNLETVERLQKEVR-RGATYHRSLELLKASRE 215
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA1_PROMA (Lipoyl synthase 1 OS=Prochlorococcus marinus GN=lipA1 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 3.026e-30 Identity = 69/192 (35.94%), Postives = 105/192 (54.69%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ P ++ + L +L L+TVC+EA CPN+GEC++GG TAT +I+G CTR C +C++ ++ + EA+ GL +VVITSV+RDDL D G+ F + ++ IE L+PDF GN ++V + NV HNIETV L R + +K+SL++L + P Sbjct: 11 WLRVKAPQHERIGYVADLLSDLNLNTVCQEASCPNIGECFAGG-----TATFLIMGPGCTRACPYCDIDFDKSVRSLDPSEPERLGEAVKRLGLKHVVITSVNRDDLEDGGASQFVSCIDAVRASSVETTIELLIPDFCGNWDAFKKVMNASPNVLNHNIETVPRLYKRARP-QGLYKRSLELLRRVRQESP 196
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA1_GLOVI (Lipoyl synthase 1 OS=Gloeobacter violaceus GN=lipA1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.952e-30 Identity = 69/184 (37.50%), Postives = 105/184 (57.07%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVL 815 W++ P ++ +K LR+L L+TVCEEA CPN+GEC+ G TAT +I+G CTR C +C++ + +A+A+ GL +VVITSV+RDDLAD G+ FA+ + ++ + P IE L+PDF G+ + V + V HN ETV L VR + ++ ++L +L Sbjct: 7 WLRVKAPQRERVGAVKDILRDLALNTVCEEASCPNIGECFKAG-----TATFLIMGPACTRACPYCDIDFEKYPKALDPTEPERLAQAVRRMGLRHVVITSVNRDDLADGGALQFARCIEAVRRVMPQTTIEVLIPDFCGSEAALDIVIAAHPQVINHNTETVPRLYRRVRP-QGDYGRTLQLL 184
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_LEIXX (Lipoyl synthase OS=Leifsonia xyli subsp. xyli GN=lipA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.161e-30 Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K G +Y Q+ ++ LHTVC+EA CPN+ ECW E AT +I G CTR C FC + T + VAE++A GL Y +T V RDDL D+G+ +A+T+R++ P +E LVPDF G+ + EV + VFAHN+ETV + +R +++SLDV+ + AG +T +++ Sbjct: 28 WIKTRATMGPEYRQLHSLVKSEGLHTVCQEAGCPNIYECWEDRE-----ATFLIGGSQCTRRCDFCQIDTGKPAEFDRDEPR-RVAESVARMGLRYSTVTGVARDDLEDEGAWLYAETIREIHRQSPGTGVEILVPDFSGDPELLGEVFGARPEVFAHNVETVPRIFKRIRP-AFRYERSLDVIAQGR---AAGLITKSNL 218
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_CLAM3 (Lipoyl synthase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=lipA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 5.161e-30 Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVPAGTLTXTSI 866 W+K + G +Y +++ ++ LHTVC+EA CPN+ ECW E AT +I G CTR C FC + T + VA+++ GL Y +T V RDDL D+G+ A+TVR++ P +E L DF GN + EV S VFAHN+ETV + +R +++SLDV+ A+D AG +T +++ Sbjct: 30 WIKTTARMGPEYQALQQLVKTEDLHTVCQEAACPNIYECWEDRE-----ATFLIGGSQCTRRCDFCQIDTGKPADYDTDEPR-RVADSVRRMGLRYATVTGVARDDLPDEGAWLHAETVRRIHADNPGTGVEILATDFSGNPDLLAEVFSSRPEVFAHNVETVPRIFKRIRP-AFRYERSLDVITQARD---AGLITKSNL 220 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |