FC878108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NEIMB (Lipoyl synthase OS=Neisseria meningitidis serogroup B GN=lipA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ +P K+ +IK LRE K+HTVCEEA CPN+GEC+S G TAT MI+GD CTR C FC+V R N+AE++ + L YVVITSVDRDDL D G+ HFA ++ ++E PN IE LVPDFRG + ++ +A++ +V HN+ET L R AN++ SLD+L K+ +P Sbjct: 40 WIRAKLPSR-KFFEIKDILREQKMHTVCEEASCPNIGECFSKG-----TATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPR-NLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARP-GANYQHSLDLLKRYKEMMP 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NEIMA (Lipoyl synthase OS=Neisseria meningitidis serogroup A GN=lipA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ +P K+ +IK LRE K+HTVCEEA CPN+GEC+S G TAT MI+GD CTR C FC+V R N+AE++ + L YVVITSVDRDDL D G+ HFA ++ ++E PN IE LVPDFRG + ++ +A++ +V HN+ET L R AN++ SLD+L K+ +P Sbjct: 40 WIRAKLPSR-KFFEIKDILREQKMHTVCEEASCPNIGECFSKG-----TATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPK-NLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARP-GANYQHSLDLLKRYKEMMP 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NEIM0 (Lipoyl synthase OS=Neisseria meningitidis serogroup C (strain 053442) GN=lipA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ +P K+ +IK LRE K+HTVCEEA CPN+GEC+S G TAT MI+GD CTR C FC+V R N+AE++ + L YVVITSVDRDDL D G+ HFA ++ ++E PN IE LVPDFRG + ++ +A++ +V HN+ET L R AN++ SLD+L K+ +P Sbjct: 40 WIRAKLPSR-KFFEIKDILREQKMHTVCEEASCPNIGECFSKG-----TATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPR-NLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARP-GANYQHSLDLLKRYKEMMP 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NEIG2 (Lipoyl synthase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=lipA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ +P K+ +IK LRE K+HTVCEEA CPN+GEC+S G TAT MI+GD CTR C FC+V R N+AE++ + L YVVITSVDRDDL D G+ HFA ++ ++E PN IE LVPDFRG + ++ +A++ +V HN+ET L R AN++ SLD+L K+ +P Sbjct: 40 WIRAKLPSR-KFFEIKDILREQKMHTVCEEASCPNIGECFSKG-----TATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPK-NLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARP-GANYQHSLDLLKRYKEMMP 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_NEIG1 (Lipoyl synthase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=lipA PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.147e-37 Identity = 88/193 (45.60%), Postives = 120/193 (62.18%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGN-NGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ +P K+ +IK LRE K+HTVCEEA CPN+GEC+S G TAT MI+GD CTR C FC+V R N+AE++ + L YVVITSVDRDDL D G+ HFA ++ ++E PN IE LVPDFRG + ++ +A++ +V HN+ET L R AN++ SLD+L K+ +P Sbjct: 40 WIRAKLPSR-KFFEIKDILREQKMHTVCEEASCPNIGECFSKG-----TATFMIMGDICTRRCPFCDVGHGRPNMLDPDEPK-NLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPNTKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARP-GANYQHSLDLLKRYKEMMP 224
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_EHRCJ (Lipoyl synthase OS=Ehrlichia canis (strain Jake) GN=lipA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.498e-37 Identity = 81/188 (43.09%), Postives = 115/188 (61.17%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 W+K +P GD + Q++ ++ KL+TVCEEA CPN+GECW+ AT+MILG TCTR C FCNV T N+A+AI S L +VVITSVDRDDL D G+GHF + + ++++ N+ IE L PDF +G + ++A +V+ HN+ETV L + +R +A + SL +L K Sbjct: 7 WLKVKMPTGDTFYQMRNLMKLYKLNTVCEEAACPNVGECWNKKH-----ATVMILGSTCTRACAFCNVATG-IPDKLDPHEPQNLAKAINSLKLHHVVITSVDRDDLPDGGAGHFVECIEEIRKRDDNITIEILTPDFLNKHGAIDKIAAVAPDVYNHNVETVPRLYARIRP-KARYFHSLYLLKAVK 187
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_CALS8 (Lipoyl synthase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=lipA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.498e-37 Identity = 80/188 (42.55%), Postives = 114/188 (60.64%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 W++ I ++ K L++L LHTVC+EA+CPN+ EC+S TAT +ILGD CTR C FC+VK + +AEA+ L YVV+TSV RDDL D G+ HFA + K+KEL P +E L+PDF G+ + +V + +V +HN+ETV L VR +A++++SL VL +AK Sbjct: 9 WLRIRIKANQSVEEVIKLLKDLSLHTVCQEAQCPNIFECFS-----KKTATFLILGDVCTRNCTFCDVKKGKPQEVDKNEPK-KIAEAVKVLNLSYVVVTSVTRDDLEDGGAEHFANVIEKIKELNPQTKVEVLIPDFNGDEKAIYKVVSARPDVLSHNVETVPRLYPTVRS-KADYERSLSVLKVAK 189
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_BACSK (Lipoyl synthase OS=Bacillus clausii (strain KSM-K16) GN=lipA PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.498e-37 Identity = 86/192 (44.79%), Postives = 114/192 (59.38%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W+K + + Y +KK +RE KLHTVCEEA+CPN+ ECW+ +T AT MILGD CTRGCRFC VKT VAE++ + GL +VVIT+V RDDL D G+ FA+TVR ++ P IE L D GN ++ + + N+ HNIETV L VR RA + ++L+ L AK+ P Sbjct: 16 WLKIKLNTNESYTGLKKMMREKKLHTVCEEARCPNIHECWAVRKT----ATFMILGDICTRGCRFCAVKTG-LPTELDLQEPERVAESVETMGLKHVVITAVARDDLKDGGAAVFAETVRAVRRKNPFCTIEVLPSDMLGNESSLQTLMDARPNIMNHNIETVRRLTPKVR-ARAKYDRTLEFLRRAKEMHP 201
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_RICCK (Lipoyl synthase OS=Rickettsia canadensis (strain McKiel) GN=lipA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 83/188 (44.15%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREVAKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAK 827 W+K P +Y K ++ L+L+TVCEEA CPN+GECWS AT+MILG CTR CRFCNVKT R +AEA+ L +VVITSVDRDDL D G+ HFA+ + ++++ PN +E L PDF G +A S +VF HN+ETV L +R A + SL +L K Sbjct: 10 WIKVKAPNSVEYYNTKDLIKNLRLNTVCEEAACPNIGECWSKKH-----ATMMILGSVCTRACRFCNVKTGRPDLLDPHEPQ-RLAEAVQKLNLKHVVITSVDRDDLEDGGALHFAECINEIRKSSPNTTVEILTPDFLRKEGAAEIIAHSKPDVFNHNVETVPSLYKTIRP-GARYYNSLSLLHSIK 190
BLAST of FC878108 vs. ExPASy Swiss-Prot
Match: LIPA_PSEU2 (Lipoyl synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lipA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.556e-37 Identity = 90/193 (46.63%), Postives = 118/193 (61.14%), Query Frame = 3 Query: 264 WMKESIPGGDKYVQIKKKLRELKLHTVCEEAKCPNLGECWSGGETGTATATIMILGDTCTRGCRFCNVKTSRAXXXXXXXXXTNVAEAIASWGLDYVVITSVDRDDLADQGSGHFAQTVRKLKELKPNMLIEALVPDFRGNNGCVREV-AKSGLNVFAHNIETVEELQSAVRDHRANFKQSLDVLMMAKDYVP 839 W++ IP + +IK+ LR+ KLH+VCEEA CPNLGEC+SGG TAT MI+GD CTR C FC+V R + +A AIA L YVVITSVDRDDL D G+ HFA +R+++ L P + +E LVPD+RG E+ A +VF HN+ETV L A R ++++ SL +L K VP Sbjct: 54 WIRVRIPVSPEVDRIKQLLRKHKLHSVCEEASCPNLGECFSGG-----TATFMIMGDICTRRCPFCDVGHGRPKPLDVNEPKS-LAIAIADLRLKYVVITSVDRDDLRDGGAQHFADCIREIRLLSPGVQLETLVPDYRGRMDVALEITAAEPPDVFNHNLETVPRLYKAARP-GSDYQWSLTLLQRFKQMVP 239 The following BLAST results are available for this feature:
BLAST of FC878108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878108 ID=FC878108; Name=FC878108; organism=Citrus clementina; type=EST; length=866bpback to top |