FC878113

Overview
NameFC878113
Unique NameFC878113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length829
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12189 contig Ccv1_Contig12189:10..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.418e-13
Identity = 61/209 (29.19%), Postives = 100/209 (47.85%), Query Frame = 2
Query:  215 KKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCS--VFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            K+G K+ + P   PR LP IG++  + + PH +L           +M   LG   V++  S +VA++IL +   VFA RP  +    L ++ R + FAPYG YWR ++ +    L   K + S    R +  S M+  I         + ++L   SL N + S    GRK     YS  T+++ L + +     L+G+ +   ++PWL
Sbjct:   25 KRGKKS-NTPRSPPR-LPLIGNLHQLGHHPHRSLCSLSHRYGP--LMLLHLGRVPVLVVSSADVARDILKTHDRVFASRPRSKLFEKLFYDGRDVAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSLQVNVSELL--GSLTNDVISRIALGRK-----YSGETDSKELMKRL---MMLMGEFSVGTYVPWL 219          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.852e-13
Identity = 58/199 (29.15%), Postives = 96/199 (48.24%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANL-PHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSV--FADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI--ASYGGSAFRLRDILKPASLNNMMC-SVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPW 823
            PGP+GLP IG++  M    P H L           +    +G  R+ +  S  +AKE+L +    F  RP+ +   ++ +  R +GF  Y  Y+R +R++   +LF P ++ S  P R +   +M+  I  A+       L ++L  +  N ++C   FG++Y   G    TE +R   ++ E   LLG L FSD  P+
Sbjct:   31 PGPKGLPIIGNLHQMEKFNPQHFLFRLSKLYGP--IFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLL-SFTNCVVCRQAFGKRYNEYG----TEMKRFIDILYETQALLGTLFFSDLFPY 222          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.419e-13
Identity = 52/199 (26.13%), Postives = 92/199 (46.23%), Query Frame = 2
Query:  245 IPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMF-NRAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGR--KYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            +P PR LP IG++  + +LPH +L           VM    G   VI+  S + A++I+ +   V+A RP       L + ++ +GF+P+G YWR  + I   HL    ++ S    R++  + M+  I     S+          +L   +CS+         LG + + +   +  ++E+  +LLG  N  D++P L
Sbjct:   38 LPSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGP--VMLLHFGSKPVIVASSVDAARDIMKTHDVVWASRPKSSIVDRLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDSSV--------INLGEHLCSLTNNIISRVALGRTYDEKESGIEHIIEQFVELLGIFNVGDYIPRL 226          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 60/220 (27.27%), Postives = 106/220 (48.18%), Query Frame = 2
Query:  203 KHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEIL---NSSVFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSA--------FRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            K LY K ++  + P PGP   PF+G + LM   P H L           + +   G  RV++  SP++A+E     N  V + RP++ +A  + +N   +G APYG +WR LRRI +  +    ++ + +  R D   +M++ ++ Y  ++          L  +L   + NN++  V G++Y     ++  EA    +LV +     G  + +D+LP L
Sbjct:   17 KFLYSK-TQRFNLP-PGPPSRPFVGHLHLMKP-PIHRLLQRYSNQYGP-IFSLRFGSRRVVVITSPSLAQESFTGQNDIVLSSRPLQLTAKYVAYNHTTVGTAPYGDHWRNLRRICSQEILSSHRLINFQHIRKDEILRMLTRLSRYTQTSNESNDFTHIELEPLLSDLTFNNIVRMVTGKRYYGDDVNNKEEAELFKKLVYDIAMYSGANHSADYLPIL 232          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 52/197 (26.40%), Postives = 88/197 (44.67%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNS--SVFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSS-NTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            PGP+  P IG++  +   PH +            +M   +G   V++  S +VA + L +  + F+ RP    A  + +N + + FAPYG  WR LR+I + HLF  K ++     R D    +   +AS G    +L  +L   + N +   + G++    G    + +A     +V E   + G  N  D +P L
Sbjct:   35 PGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGP--LMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQDLVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTLTRALASAGQKPVKLGQLLNVCTTNALARVMLGKRVFADGSGDVDPQAAEFKSMVVEMMVVAGVFNIGDFIPQL 229          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71BX_ARATH (Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=CYP71B36 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 61/240 (25.42%), Postives = 101/240 (42.08%), Query Frame = 2
Query:  116 LASILLCMALFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVF--ADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG--GSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP 820
            +A+IL    LF   + L  + H           KK  +   KP P P G P IG++  +  LPH +L           VM    G    ++  S   AK++L         RP      +L +N   I F+P+  YW+ LRRI    LF  K++ S +P + D   +++  ++     G+   L +     ++     + FG  +   G   N++  R  +L+ + Y  LG  + SD+ P
Sbjct:    1 MATILFLSLLFLSCILLAAFTH-----------KKRQQHQRKP-PSPPGFPIIGNLHQLGELPHQSLWRLSKKYG--HVMLLKFGSIPTVVVSSSETAKQVLKIHDLHCCSRPSLAGPRALSYNYLDIAFSPFDDYWKELRRICVQELFSVKRVQSFQPIKEDEVKKLIDSVSESASQGTPVNLSEKFTSLTVRVTCKATFGVNFQ--GTVLNSD--RFEKLIHDTYLFLGSFSASDYFP 222          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.126e-13
Identity = 55/199 (27.64%), Postives = 94/199 (47.24%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI--ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            P P  LP IG++  ++  PH +L           ++ F  G   +++  S   A+E+L +    FA+RP  ++ + LM   R + FAPYG YWR ++ +   +L   K + S E  R D  + M+  +  AS   S+  L ++      +       GRK     +S +  AR L + V +  +LLG+    +++P LA
Sbjct:   35 PSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHF--GRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLSELFITLPSDVTSRVALGRK-----HSEDETARDLKKRVRQIMELLGEFPIGEYVPILA 226          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71D6_SOLCH (Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71D6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.389e-13
Identity = 52/152 (34.21%), Postives = 74/152 (48.68%), Query Frame = 2
Query:  197 WGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMAN-LPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGS 640
            W K  Y K S+    P PGP  LPFIGSM  +A   PH  L           +M   LGE   ++  SP++AKE+L +    FA RP   +   + ++R  I F+PYG YW+ +R+I  T +   K + S    R D   +++  I S   S
Sbjct:   19 WKK--YSKNSQTKKLP-PGPWKLPFIGSMHHLAGGRPHRVLRDLAKKYGP--LMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAMDIICYDRCDIAFSPYGEYWKQMRKICVTEVLSAKSVRSFSSIRCDEVVRLIDSIQSSSSS 165          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.389e-13
Identity = 57/214 (26.64%), Postives = 100/214 (46.73%), Query Frame = 2
Query:  203 KHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI--ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            K   K+ +   + P P P  LP IG++  ++  PH +L           ++ F  G   +++  S   A+E+L +    FA+RP  ++ + LM   R + F PYG YWR ++ +   +L   K + S E  R +  ++M+  +  AS   S+  L ++      +       GRK     +S +  AR L + V +  +LLG+    D++P LA
Sbjct:   21 KQFLKRTANKVNLP-PSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHF--GRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGGRDVVFGPYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLSELFVTLPSDVTSRIALGRK-----HSEDETARDLKKRVRQIMELLGEFPIGDYVPALA 226          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71BB_ARATH (Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=CYP71B11 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 48/198 (24.24%), Postives = 87/198 (43.94%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNS--SVFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEE----GYDLLGKLNFSDHLP 820
            PGP  LP IG++  + + PH ++           +MA   G    ++  +P   KE+L +  +    RP       L +N + IGF PY  YWR +R++    L+  K++ S +  R +  + +V  I        +   + KP +LN  +  + G     + +  N +  +L  L EE      +++G    +D+ P
Sbjct:   31 PGPPRLPIIGNLHQLGSKPHSSMFKLSEKYGP--LMALRFGSVSTVVASTPETVKEVLKTFDAECCSRPYMTYPARLTYNLKDIGFCPYTKYWREVRKMTVVELYTAKRVQSFQHTRKEEVASLVDFIT-------QAASLEKPVNLNTKLMKLSGSVICRVVFGINLKGSKLENLYEEVIQGTMEVVGSFAAADYFP 219          
The following BLAST results are available for this feature:
BLAST of FC878113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
C71AL_ARATH1.418e-1329.19Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C83B1_ARATH1.852e-1329.15Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C71A2_SOLME2.419e-1326.13Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C81F1_ARATH3.160e-1327.27Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
F3PH_PETHY4.126e-1326.40Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BX_ARATH4.126e-1325.42Cytochrome P450 71B36 OS=Arabidopsis thaliana GN=C... [more]
C71AD_ARATH4.126e-1327.64Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71D6_SOLCH5.389e-1334.21Cytochrome P450 71D6 OS=Solanum chacoense GN=CYP71... [more]
C71AC_ARATH5.389e-1326.64Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71BB_ARATH9.193e-1324.24Cytochrome P450 71B11 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA42CH07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42CH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878113 ID=FC878113; Name=FC878113; organism=Citrus clementina; type=EST; length=829bp
AAAAAAAAAAAAAAACGTAATCGCTGCAAATACTTCAATGGAATCTAAGA
TAGACTGTTTCTGGGTTTTGGCTCTTGCTTCCAAATGCAAATCTTTAACA
TTCCAAAACAATATTTTGGCGTCTATTTTACTTTGCATGGCTTTGTTTTG
GCTAGCCATGGCTTTGTGTTTCTGGGCACACCCTGGAGGCCATGCCTGGG
GTAAGCACTTATACAAGAAAGGCAGCAAAGCCTGCAGTAAGCCAATACCT
GGACCCCGAGGGTTACCATTTATTGGAAGCATGAGCCTCATGGCTAACCT
ACCTCACCACAACCTGGCTGCGGCAGCAAAAGCTTATAAAGCTAAACGGG
TCATGGCTTTTAGCCTCGGTGAGACTCGGGTTATTATTACATGCAGTCCA
AATGTGGCTAAAGAGATACTAAACAGCTCGGTATTTGCTGATCGTCCTGT
AAAAGAGTCTGCTTATAGTTTAATGTTCAATAGAGCAATAGGGTTTGCTC
CTTATGGAGTTTACTGGCGAACCCTAAGAAGAATCGCTGCAACTCATCTC
TTTTGTCCCAAGCAAATCAACTCCGCTGAGCCACAAAGGTCCGATATCGC
TTCCCAAATGGTCTCGATGATTGCATCTTACGGCGGATCAGCTTTTCGTC
TTCGTGACATACTAAAGCCAGCTTCGCTTAATAACATGATGTGTTCAGTG
TTTGGTCGCAAGTACGCCCTGCTGGGTTATTCTTCTAATACTGAAGCCCG
TCGACTGAGCCGCCTTGTTGAAGAAGGCTATGACCTGCTAGGAAAGCTCA
ATTTCTCTGATCACCTCCCTTGGCTTGCT
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