FC878113

Overview
NameFC878113
Unique NameFC878113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length829
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71BW_ARATH (Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=CYP71B35 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 51/204 (25.00%), Postives = 89/204 (43.63%), Query Frame = 2
Query:  239 KPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVF--ADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNN----MMCSVFGRKYALLGYSSNT-EARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            +  P P G P IG++  +  LPH  L           VM   LG    ++  S + A+++L         RP       L +N   I F+PY  YW+ +R++    LF  KQ++S +P + +   +M+  IA              P +LNN    +  SV  R    + +      + R +++V E  ++LG  + +D +P++
Sbjct:   29 RQFPCPPGFPIIGNLHQIGELPHQTLWKLSKKYGP--VMHLMLGRVPTVVVSSSDTARQVLRVHDLHCCTRPSLSGPRELSYNYLDIAFSPYDDYWKEVRKLCVQELFSTKQVHSIQPIKDEEVKKMIDSIAESASQK-------NPVNLNNKCLELTVSVVCRTAFGVSFEGTVLNSDRFNKIVREALEMLGSFSAADFIPYV 223          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71AG_ARATH (Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=CYP71A16 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.675e-12
Identity = 51/199 (25.63%), Postives = 93/199 (46.73%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI--ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            P P  LP IG++  ++  PH  L           ++ F  G   V+I  S +VA +++ +    FA+RP+ +SA+ +    R + FAPYG YWR ++ +   HL   K + S+E +R +  + ++  +  AS   S+  L  +     + NM+  + G+      YS       +  + +   D +G     +++P LA
Sbjct:   34 PSPWRLPVIGNLHQLSLHPHRALSSLSARHGPLMLLRF--GRVPVLIVSSADVAHDVMKTHDLKFANRPITKSAHKISNGGRDLVFAPYGEYWRNVKSLCTIHLLSNKMVQSSEKRREEEITLLMETLEEASLSSSSVNLSKL-----ITNMVSDIMGKVVLGKKYSGEEGTIDVKTITKSFLDAVGLSPVGEYIPSLA 225          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.562e-12
Identity = 55/173 (31.79%), Postives = 84/173 (48.55%), Query Frame = 2
Query:  218 KGSKACSKPIPGPRGLPFIGSM-SLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSV--FADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASY----GGSAFRLRDILKPASLNNMMCSVFGRK 712
            K S  C  P PGPR LP IG++  ++ +LP H             +M   LGE   II  SP +A+EI+ +    F+DRP    +  + +N + I F+ +G YWR LR+I    L   K++ S    R +  +++V  IA+     GGS F L   +   +      + FG+K
Sbjct:   36 KTSSTCKLP-PGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGP-LMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDRPDFVLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKIAATASEEGGSIFNLTQSIYSMTFGIAARAAFGKK 206          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C75A2_SOLME (Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 55/199 (27.64%), Postives = 93/199 (46.73%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNS--SVFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQI-NSAEPQRSDIASQMVSMI-ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWLA 829
            PGP G P IG++ L+  +PH  L           +M   +G   +++  +PN AK  L +    F++RP    A  + +N + + FAPYG  W+ LR+++  H+   K + N A  + +++   + SM  AS+ G    + D+L  A + NM+  V   K   +      E      +V E   + G  N  D +P +A
Sbjct:   38 PGPEGWPVIGALPLLGGMPHVALAKMAKKYGP--IMYLKVGTCGMVVASTPNAAKAFLKTLDINFSNRPPNAGATHMAYNAQDMVFAPYGPRWKLLRKLSNLHMLGGKALENWANVRANELGHMLKSMFDASHVGERIVVADMLTFA-MANMIGQVMLSKRVFV--EKGKEVNEFKNMVVELMTVAGYFNIGDFIPQIA 231          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 49/146 (33.56%), Postives = 70/146 (47.95%), Query Frame = 2
Query:  197 WGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMAN-LPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSS--VFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI 622
            W K+L    +K   K  PGP  LPFIG M  +A  LPH  L           +M   LGE   ++  SP +AK++L +    FA RP   +   + +NR  I F+PYG YWR +R+I    +   K + S    R D   +++  I
Sbjct:   19 WKKYLNNSQTK---KLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGP--LMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASRPKLLAMDIICYNRRDIAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSI 159          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 70/240 (29.17%), Postives = 102/240 (42.50%), Query Frame = 2
Query:  122 SILLCMALFWLAMALCFWAHPGGHAWGKHLYKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVF--ADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYG----GSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP 820
            SI LC  L  L ++L F          K L  KG     K  PGP+GLP IG++       H +L           VM    G   VII  S   A+E+L +       RP    +    +N + IGFAPYG  WR +R+IA + LF  K++ S    R D +  +V  ++        S+  LR ++   + + +    FG+ +         +   +  LV E    LG L F+D LP
Sbjct:    2 SIFLCFLLL-LPLSLIFLK--------KLLPSKG-----KLPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGP--VMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFC-----DFVDMETVEELVLESETNLGSLAFADFLP 220          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C84A1_ARATH (Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.264e-11
Identity = 51/195 (26.15%), Postives = 88/195 (45.13%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEIL--NSSVFADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPW 823
            PGPRG P IG+M +M  L H  L           +    +G   +    SP VA+++L    SVF++RP   +   L ++RA + FA YG +WR +R++    +F  K+  S    R ++  +MV  ++   G    + + +   + N    + FG        +         R+++E   L G  N +D +P+
Sbjct:   42 PGPRGWPIIGNMLMMDQLTHRGLANLAKKYGG--LCHLRMGFLHMYAVSSPEVARQVLQVQDSVFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKVCVMKVFSRKRAESWASVRDEV-DKMVRSVSCNVGKPINVGEQIFALTRNITYRAAFGS-------ACEKGQDEFIRILQEFSKLFGAFNVADFIPY 226          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.264e-11
Identity = 59/217 (27.19%), Postives = 91/217 (41.94%), Query Frame = 2
Query:  197 WGKHLYKKGSKACSKPIPGPRGLPFIGSM---SLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSV--FADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGY-SSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            W    YK+  K+  K  PGP  LP IG++   +L A+LP   L           +M   LGE   ++  SP +A E++ +    F  RP   +   +++    I FAPYG YWR +R+I    L   K++ S    R D   +++  I S  GS         P  L+  + S+ G   +   +   N +      LV +   + G     D  P L
Sbjct:   20 WLVKTYKQ--KSSHKLPPGPWRLPIIGNLHQLALAASLPDQALQKLVRKYGP--LMHLQLGEISTLVVSSPKMAMEMMKTHDVHFVQRPQLLAPQFMVYGATDIAFAPYGDYWRQIRKICTLELLSAKRVQSFSHIRQDENKKLIQSIHSSAGS---------PIDLSGKLFSLLGTTVSRAAFGKENDDQDEFMSLVRKAITMTGGFEVDDMFPSL 223          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71E1_SORBI (4-hydroxyphenylacetaldehyde oxime monooxygenase OS=Sorghum bicolor GN=CYP71E1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 49/196 (25.00%), Postives = 88/196 (44.90%), Query Frame = 2
Query:  248 PGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEIL--NSSVFADRPVKESAYSLMFN-RAIGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMI--ASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLP 820
            PGP  LP +G++ L+  LPH NL           VM   LG    ++  S   A+E+L  +      RP       L ++ + +GFAPYG YWR +R++ A  L   +++ +A   R     ++V+ +  A+   ++  L D +   +   +    FG  YA   ++      R   ++++  D++   +  D  P
Sbjct:   57 PGPAQLPILGNLHLLGPLPHKNLRELARRYGP--VMQLRLGTVPTVVVSSAEAAREVLKVHDVDCCSRPASPGPKRLSYDLKNVGFAPYGEYWREMRKLFALELLSMRRVKAACYAREQEMDRLVADLDRAAASKASIVLNDHVFALTDGIIGTVAFGNIYASKQFA---HKERFQHVLDDAMDMMASFSAEDFFP 247          
BLAST of FC878113 vs. ExPASy Swiss-Prot
Match: C71BQ_ARATH (Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=CYP71B26 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 50/208 (24.04%), Postives = 90/208 (43.27%), Query Frame = 2
Query:  212 YKKGSKACSKPIPGPRGLPFIGSMSLMANLPHHNLXXXXXXXXXXRVMAFSLGETRVIITCSPNVAKEILNSSVF--ADRPVKESAYSLMFNRA-IGFAPYGVYWRTLRRIAATHLFCPKQINSAEPQRSDIASQMVSMIASYGGSAFRLRDILKPASLNNMMCSVFGRKYALLGYSSNTEARRLSRLVEEGYDLLGKLNFSDHLPWL 826
            +K+ +    + IP P G P IG++  +  L H +L           VM   LG+   +I  S   AK+ L         RP       L +N   +  +PY  YW+ LR++ +  LF   +I S +P + +   +++  IA    S+ +    L    L      V    + +    S   + R ++LV + +++LG  + SD +P++
Sbjct:   21 FKRKNHGKHRRIPSPPGFPIIGNLHQLGELQHQSLWKLSKKYGP--VMLLKLGKVPTLILSSSETAKQALRDYDLHCCSRPSLAGGRELSYNNLDMSSSPYNEYWKELRKLCSQELFSANKIQSIQPIKDEEVKKVIDSIAE--SSSLKNPVNLSKTFLALTTSVVCKAAFGVSFEGSVLNSDRFNKLVRDTFEMLGSFSASDFIPYV 224          
The following BLAST results are available for this feature:
BLAST of FC878113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
C71BW_ARATH1.201e-1225.00Cytochrome P450 71B35 OS=Arabidopsis thaliana GN=C... [more]
C71AG_ARATH2.675e-1225.63Cytochrome P450 71A16 OS=Arabidopsis thaliana GN=C... [more]
C71DA_SOYBN4.562e-1231.79Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C75A2_SOLME5.959e-1227.64Flavonoid 3',5'-hydroxylase OS=Solanum melongena G... [more]
C71D7_SOLCH5.959e-1233.56Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71B5_ARATH5.959e-1229.17Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C84A1_ARATH2.264e-1126.15Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CY... [more]
C71D8_SOYBN2.264e-1127.19Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C71E1_SORBI3.862e-1125.004-hydroxyphenylacetaldehyde oxime monooxygenase OS... [more]
C71BQ_ARATH3.862e-1124.04Cytochrome P450 71B26 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA42CH07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA42CH07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878113 ID=FC878113; Name=FC878113; organism=Citrus clementina; type=EST; length=829bp
AAAAAAAAAAAAAAACGTAATCGCTGCAAATACTTCAATGGAATCTAAGA
TAGACTGTTTCTGGGTTTTGGCTCTTGCTTCCAAATGCAAATCTTTAACA
TTCCAAAACAATATTTTGGCGTCTATTTTACTTTGCATGGCTTTGTTTTG
GCTAGCCATGGCTTTGTGTTTCTGGGCACACCCTGGAGGCCATGCCTGGG
GTAAGCACTTATACAAGAAAGGCAGCAAAGCCTGCAGTAAGCCAATACCT
GGACCCCGAGGGTTACCATTTATTGGAAGCATGAGCCTCATGGCTAACCT
ACCTCACCACAACCTGGCTGCGGCAGCAAAAGCTTATAAAGCTAAACGGG
TCATGGCTTTTAGCCTCGGTGAGACTCGGGTTATTATTACATGCAGTCCA
AATGTGGCTAAAGAGATACTAAACAGCTCGGTATTTGCTGATCGTCCTGT
AAAAGAGTCTGCTTATAGTTTAATGTTCAATAGAGCAATAGGGTTTGCTC
CTTATGGAGTTTACTGGCGAACCCTAAGAAGAATCGCTGCAACTCATCTC
TTTTGTCCCAAGCAAATCAACTCCGCTGAGCCACAAAGGTCCGATATCGC
TTCCCAAATGGTCTCGATGATTGCATCTTACGGCGGATCAGCTTTTCGTC
TTCGTGACATACTAAAGCCAGCTTCGCTTAATAACATGATGTGTTCAGTG
TTTGGTCGCAAGTACGCCCTGCTGGGTTATTCTTCTAATACTGAAGCCCG
TCGACTGAGCCGCCTTGTTGAAGAAGGCTATGACCTGCTAGGAAAGCTCA
ATTTCTCTGATCACCTCCCTTGGCTTGCT
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