FC878121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23 Identity = 45/61 (73.77%), Postives = 52/61 (85.25%), Query Frame = 2 Query: 260 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKP 442 + + CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVGG RK KRSS P Sbjct: 72 EKVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSSTP 132
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana GN=DOF1.2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.113e-23 Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 2 Query: 272 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRS 433 CPRC S NTKFCYYNNY+LSQPR+FCK CRRYWTKGG LRN+PVGGGCRK RS Sbjct: 40 CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRS 93
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: MNB1A_MAIZE (Dof zinc finger protein MNB1A OS=Zea mays GN=MNB1A PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23 Identity = 51/81 (62.96%), Postives = 57/81 (70.37%), Query Frame = 2 Query: 272 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSAXXXXXXXXEAPAAGER 514 CPRC S +TKFCYYNNYN SQPRHFCK CRRYWTKGG LRNVPVGGG RK K SS +S +A + PA+ +R Sbjct: 49 CPRCASRDTKFCYYNNYNTSQPRHFCKGCRRYWTKGGTLRNVPVGGGTRK-KPSSSSSSSSYVAAADADRQPKKKPASKKR 128
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF25_ARATH (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana GN=DOF2.5 PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23 Identity = 45/59 (76.27%), Postives = 51/59 (86.44%), Query Frame = 2 Query: 260 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 436 + L CPRC+S NTKFCYYNNY+L+QPR+FCK CRRYWT+GG LRNVPVGG RK KRSS Sbjct: 78 EKLNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSS 136
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF58_ARATH (Dof zinc finger protein DOF5.8 OS=Arabidopsis thaliana GN=DOF5.8 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.028e-23 Identity = 43/65 (66.15%), Postives = 51/65 (78.46%), Query Frame = 2 Query: 245 PHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSK 439 P + L CPRC+S NTKFCYYNNYN SQPRHFCK+CRRYWT GG LR++PVGG RK+ + S+ Sbjct: 25 PTDQQEQLSCPRCESTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGVSRKSSKRSR 89
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana GN=DOF4.1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.369e-22 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 2 Query: 272 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSSKPKPNSESSA 466 CPRC+S NTKFCYYNNY+L+QPR+ CK+CRRYWT+GG LRNVPVGGG RK K+ P PNS +S+ Sbjct: 70 CPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK--LPFPNSSTSS 132
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF44_ARATH (Dof zinc finger protein DOF4.4 OS=Arabidopsis thaliana GN=DOF4.4 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.788e-22 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 272 CPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKR 430 CPRCDS NTKFC+YNNY+ SQPR+FCKNCRRYWT GG LRN+PVGG CRK KR Sbjct: 26 CPRCDSDNTKFCFYNNYSESQPRYFCKNCRRYWTHGGALRNIPVGGSCRKPKR 78
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF16_ARATH (Dof zinc finger protein DOF1.6 OS=Arabidopsis thaliana GN=DOF1.6 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.159e-21 Identity = 48/88 (54.55%), Postives = 58/88 (65.91%), Query Frame = 2 Query: 260 QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCR----KTKRSSKPKPNSESSAXXXXXXXXEAPAAGE 511 + L CPRC+S TKFCYYNNYNL+QPR++CK+CRRYWT+GG LR+VPVGGG R K RS S SS+ + PA E Sbjct: 27 EPLPCPRCNSTTTKFCYYNNYNLAQPRYYCKSCRRYWTQGGTLRDVPVGGGTRRSSSKRHRSFSTTATSSSSSSSVITTTTQEPATTE 114
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF33_ARATH (Dof zinc finger protein DOF3.3 OS=Arabidopsis thaliana GN=DOF3.3 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.977e-21 Identity = 42/57 (73.68%), Postives = 47/57 (82.46%), Query Frame = 2 Query: 266 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTKRSS 436 L CPRC S+ TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K SS Sbjct: 110 LPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSS 166
BLAST of FC878121 vs. ExPASy Swiss-Prot
Match: DOF52_ARATH (Dof zinc finger protein DOF5.2 OS=Arabidopsis thaliana GN=DOF5.2 PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.753e-21 Identity = 40/54 (74.07%), Postives = 46/54 (85.19%), Query Frame = 2 Query: 266 LKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKTK 427 L CPRC+S+ TKFCYYNNYN++QPRHFCK C+RYWT GG +RNVPVG G RK K Sbjct: 138 LPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVPVGAGRRKNK 191 The following BLAST results are available for this feature:
BLAST of FC878121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878121 ID=FC878121; Name=FC878121; organism=Citrus clementina; type=EST; length=869bpback to top |