FC878127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.107e-20 Identity = 46/121 (38.02%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 F ++P TR +T A V+T VQ +++PFQL+++ VF K Q WRL+T F++FGPL + F++ F+ RY RMLEE + A F ++ + + + + S FLG L++ LVY Sbjct: 10 FLQVPAVTRTYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALTAMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL3_MOUSE (Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.595e-20 Identity = 47/121 (38.84%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 F ++P TR +T A V+T VQ +++PFQL+++ VF K Q WRL+TTF++FGPL F++ F+ RY RMLEE + A F ++ + + + + S FLG L + LVY Sbjct: 10 FLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFFGPLGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSLFFLGQALMAMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL3_HUMAN (Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20 Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 F ++P TR +T A V+T VQ +++PFQL+++ VF K Q WRL+T F++FGPL + F++ F+ RY RMLEE + A F ++ + + + + S FLG L + LVY Sbjct: 10 FLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLGSLFFLGQALMAMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 + ++P +R +TTA V+T VQ +ITPFQL+++ +F Q WRL+T F++FGP+ N LF++ F+ RY RMLEE + A F ++ + + S FLG + LVY Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFTIMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 + ++P +R +TTA V+T VQ +ITPFQL+++ +F Q WRL+T F++FGP+ N LF++ F+ RY RMLEE + A F ++ + + S FLG + LVY Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFTIMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 6.779e-19 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 193 FFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQAFLGTTLSSTLVY 549 + ++P +R +TTA V+T VQ +ITPFQL+++ +F Q WRL+T F++FGP+ N LF++ F+ RY RMLEE + A F ++ + + S FLG + LVY Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMTLFGLFVSLVFLGQAFTIMLVY 130
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 4.394e-18 Identity = 48/135 (35.56%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 184 EQWFFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPI-----------SSQAFLGTTLSSTLVY 549 E+W+ +MP+ TR + TA VVT V II+P+ L+ + V + Q+WRL+T F+YF + L+ LFH+FF+ RY ++LEE++ F +++ + AT L I I S FL +L+ +VY Sbjct: 6 EEWYKQMPIITRSYLTAAVVTTVGCSLEIISPYNLYLNPTLVVKQYQFWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGKTTDFLYMLLFGATVLTGIVLIGGMIPYLSVSFSKIIFLSNSLTFMMVY 140
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.739e-18 Identity = 46/135 (34.07%), Postives = 77/135 (57.04%), Query Frame = 1 Query: 184 EQWFFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTI-----------APISSQAFLGTTLSSTLVY 549 E+W+ +MP+ TR + TA V+T V II+P+ L+ + V + QYWRL+T F+YF + L+ +FH+FF+ RY ++LEE++ A F +++ + A+ L I A + FL +L+ +VY Sbjct: 6 EEWYKQMPIITRSYLTAAVITTVGCSLDIISPYNLYLNPTLVVKQYQYWRLVTNFLYFRKMDLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAKIIFLSNSLTFMMVY 140
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 7.495e-18 Identity = 47/135 (34.81%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 184 EQWFFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQ-----------AFLGTTLSSTLVY 549 E+W+ +MP+ TR + TA VVT V II+P+ L+ + + V + WRL+T F+YF + L+ LFH+FF+ RY ++LEE++ A F +++ + AT L +I I FL +L+ +VY Sbjct: 6 EEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFARILFLSNSLTFMMVY 140
BLAST of FC878127 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.670e-17 Identity = 47/135 (34.81%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 184 EQWFFEMPVCTRWWTTATVVTGVLVQCHIITPFQLFYSYRAVFHKSQYWRLLTTFIYFGPLSLNLLFHIFFIQRYARMLEESA--ASVAHFAWLMFYAATTLLTIAPISSQ-----------AFLGTTLSSTLVY 549 E+W+ +MP+ TR + TA VVT V II+P+ L+ + + V + WRL+T F+YF + L+ LFH+FF+ RY ++LEE++ A F +++ + AT L I I FL +L+ +VY Sbjct: 6 EEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVY 140 The following BLAST results are available for this feature:
BLAST of FC878127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878127 ID=FC878127; Name=FC878127; organism=Citrus clementina; type=EST; length=549bpback to top |