FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METCA (Ornithine carbamoyltransferase OS=Methylococcus capsulatus GN=argF PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.151e-35 Identity = 75/182 (41.21%), Postives = 108/182 (59.34%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 F+ + D A ++ RA ++KA + + P K K + M+F K S RTRVSFE G + GG +I+L P D Q+G+ E D+ARVL R D IM R H+ + A+++ VPVINGLTD HPCQ++AD T EH G + G V ++GDGNN+ +++ A ++ F ACP G+ Sbjct: 6 FVTLRDLSSAEFRALIARAIDLKARKEP----YEPLKNKVLGMVFEKSSTRTRVSFEVGMAQFGGSSIFLSPRDTQLGRGEPIEDSARVLSRMVDCIMLRTHAHRTVEIFAEYSRVPVINGLTDRFHPCQLLADMQTYFEHRGDIAGKTVAWIGDGNNMCQTYVHAAGLLDFRLRIACPPGY 183
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_CHRVO (Ornithine carbamoyltransferase OS=Chromobacterium violaceum GN=argF PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.151e-35 Identity = 80/182 (43.96%), Postives = 107/182 (58.79%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +L SD + +R+ +K +G+ P GK MSM+F K S RTRVSFE G + LGGHA++L Q+G+ E D ARVL R +DIIM R F + LA + VPVINGLT+ HPCQ++AD T +E G ++G V +VGDGNNV +WL A+V+ F A P G+ Sbjct: 7 YLQFSDLSPDEYHHLFERSRVLKRRQSAGELH-RPLVGKVMSMVFEKNSTRTRVSFEAGMAQLGGHAMFLDTKSSQIGRGEPIEDTARVLSRMSDIIMIRTFEQGLVQRLAAHSRVPVINGLTNEYHPCQVLADIFTYVERHGSIKGKTVAWVGDGNNVCRTWLQAAAVLGFKLKVASPLGY 187
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PSEAE (Ornithine carbamoyltransferase OS=Pseudomonas aeruginosa GN=argF PE=1 SV=3) HSP 1 Score: 149.058 bits (375), Expect = 2.809e-35 Identity = 75/182 (41.21%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL D+ ++ ++ R +E+K L G + P K + + M+F K S RTR+SFE G LGG AI+L P D Q+G+ E D+ARV+ R D +M R F H + + A + VPVINGL+D HPCQ++AD T EH G ++G V ++GDGNN+ +S++ A F ACP+G+ Sbjct: 6 FLSFMDYSPEELIGLIRRGSELKDLRNRGVL-YEPLKSRVLGMVFEKASTRTRLSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSARVMSRMLDGVMIRTFAHATLTEFAAHSKVPVINGLSDDLHPCQLLADMQTFHEHRGSIQGKTVAWIGDGNNMCNSYIEAALKFDFQLRVACPEGY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METFK (Ornithine carbamoyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=argF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.809e-35 Identity = 78/182 (42.86%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL +D + + I +R +K K+ + + P +T+ MIF K S RTR+SFE G LGG AIYL D Q+G+ E DAA+V+ R +DI+M R F + I A + VPVINGLT+ HPCQI+AD T IEH G ++G V ++GD NNV ++WL A V+ F+ + P G+ Sbjct: 6 FLQFNDLNADELAHIFERTRWIKEQFKAYQQ-YWPLTDRTLVMIFEKASTRTRLSFEAGMQQLGGSAIYLNTRDSQLGRGEPVEDAAQVISRMSDIVMIRTFEQEIIERFAANSRVPVINGLTNEYHPCQILADIFTYIEHRGSIKGKTVAWIGDSNNVCNTWLQAAEVLDFNVHVSTPPGY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_ARCFU (Ornithine carbamoyltransferase OS=Archaeoglobus fulgidus GN=argF PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.809e-35 Identity = 78/181 (43.09%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 L ++D +K + +IL A ++K G + K K+++MIF PS RTRVSFE + LGGHA+YLG D++Q+G+ E +D ARVL RY +M RV H I + A+++TVPVINGL++ HPCQ++AD LTI E+ G + + +VGDGNNV +S +L A++ V + P+ + Sbjct: 5 LSMADLEKDELFEILKLAEKLKEERYKGVVTDY-LKNKSLAMIFELPSTRTRVSFEVAMTDLGGHALYLGWDELQLGRGEPIKDTARVLSRYVHAVMMRVREHSTIEEFARYSTVPVINGLSNLEHPCQVIADLLTIYEYRGDFKDVTLAWVGDGNNVCNSMILAAALTGMKMVISTPENY 184
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_SILPO (Ornithine carbamoyltransferase OS=Silicibacter pomeroyi GN=argF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35 Identity = 82/186 (44.09%), Postives = 109/186 (58.60%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALL----KSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL I D A + ++D+A +K K+ P K + +++IF KPS RTRVSF+ G +GG + L +D+Q+G E D ARVL RY D+IM R F + ++A++A VPVINGLTD +HPCQIMAD LT EH G + G KVV+ GDGNNV S+L A F + P F Sbjct: 4 FLDIHKTDAADLRAMIDQAGAMKQARLGRPKAAPDDEQPLKDRMVALIFEKPSTRTRVSFDVGVRQMGGQTMVLSGNDMQLGHGETIADTARVLSRYVDMIMIRTFDESVLAEMAEYADVPVINGLTDRSHPCQIMADVLTYEEHRGPIAGKKVVWTGDGNNVCSSFLHAAGQFGFDLTFSGPAQF 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PSEPK (Ornithine carbamoyltransferase OS=Pseudomonas putida (strain KT2440) GN=argF PE=3 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35 Identity = 76/182 (41.76%), Postives = 108/182 (59.34%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + DF ++ ++ E+K L K G F P K + + MIF K S RTRVSFE G LGG AI+L P D Q+G+ E D+A VL D++M R H + + A + VPVINGL+D +HPCQ++AD T +EH G ++G V ++GDG N+ +S++ A F ACP+G+ Sbjct: 6 FLSLLDFTTDELLGVIRHGIELKDLRKRGVL-FEPLKNRVLGMIFEKSSTRTRVSFEAGMIQLGGQAIFLSPRDTQLGRGEPIGDSAIVLSSMVDVVMIRTHAHSTLTEFAAKSRVPVINGLSDESHPCQLLADMQTFVEHRGSIQGKTVTWIGDGFNMCNSYIEAARQFDFQLRIACPEGY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METTH (Ornithine carbamoyltransferase OS=Methanobacterium thermoautotrophicum GN=argF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35 Identity = 81/179 (45.25%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 271 ISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +S D ++ +LD A + K G +GKT++MIF K S RTRVSFE G +G +YL D+Q+G+ E D AR L RY D IM R H D+++LA A+VPVINGLTD HPCQ +AD TI E +G +G ++V+VGDGNNV HS LL+ + + ACP G+ Sbjct: 5 LSVCDMDNVVDLLDLADDYK----EGKIREKILRGKTLAMIFEKSSTRTRVSFEVGAFQMGAQPLYLSASDLQLGRGEPIADTARTLSRYVDGIMIRAISHSDVVELAGEASVPVINGLTDLEHPCQALADMQTIREKLGGFDG-RLVFVGDGNNVCHSLLLITATLGMDMDVACPPGY 178
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_DESVV (Ornithine carbamoyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=argF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35 Identity = 76/182 (41.76%), Postives = 107/182 (58.79%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 F I D K+L+RA E+K +G R +GK ++IF K S RTR+SFE LGG I++ P + Q+G+ E RD ARV+ RY D ++ R FG I +LA F ++PV+N LTD HPCQ+M+D LT+ E L +V ++GDGNN+ +SW+ A PF A P+G+ Sbjct: 5 FTRIRDLGFEGAWKVLERAKEMK---DTGYRG-RTLEGKVATLIFEKASTRTRISFEVAVRHLGGTTIFMTPAESQLGRSEPLRDTARVISRYTDCMIVRTFGQAKIDELASFGSIPVVNALTDEGHPCQVMSDVLTMYERTPDLSQVRVAWIGDGNNMANSWIEAAMYFPFELFMAFPEGY 182
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_DESVH (Ornithine carbamoyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=argF PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.669e-35 Identity = 76/182 (41.76%), Postives = 107/182 (58.79%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 F I D K+L+RA E+K +G R +GK ++IF K S RTR+SFE LGG I++ P + Q+G+ E RD ARV+ RY D ++ R FG I +LA F ++PV+N LTD HPCQ+M+D LT+ E L +V ++GDGNN+ +SW+ A PF A P+G+ Sbjct: 5 FTRIRDLGFEGAWKVLERAKEMK---DTGYRG-RTLEGKVATLIFEKASTRTRISFEVAVRHLGGTTIFMTPAESQLGRSEPLRDTARVISRYTDCMIVRTFGQAKIDELASFGSIPVVNALTDEGHPCQVMSDVLTMYERTPDLSQVRVAWIGDGNNMANSWIEAAMYFPFELFMAFPEGY 182 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |