FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_RALEJ (Ornithine carbamoyltransferase OS=Ralstonia eutropha (strain JMP134) GN=argF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35 Identity = 78/182 (42.86%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +L SD +LDRA +KA K+ + ++ P +T++MIF K S RTR+SFE G LGGHA++L D Q+G+ E DAA+V+ R DIIM R FG I A + VPVINGLT+ HPCQ++AD T IE G + G V ++GD NN+ ++W+ A + F F + P G+ Sbjct: 9 YLQFSDLTPDEYEYLLDRARILKAKFKNYE-TWHPLHDRTLAMIFEKNSTRTRLSFEAGIHQLGGHAVFLNTRDSQLGRGEPIEDAAQVISRMVDIIMIRTFGQDIIERFAAHSRVPVINGLTNEYHPCQVLADVFTYIEQRGSIRGKTVAWIGDANNMAYTWIQAAERLGFTFHFSAPPGY 189
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_DECAR (Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain RCB) GN=argF PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 4.791e-35 Identity = 78/182 (42.86%), Postives = 108/182 (59.34%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL DF + + + +R + +K KS + + P +T+ MIF K S RTR+SFE G LGG AIYL D Q+G+ E DAA+V+ R +DI+M R F + I A + VPVINGLT+ HPCQI+AD T IEH G ++G V +VGD NN+ ++WL A V+ F + P + Sbjct: 6 FLQFKDFTREELEYVFERTSWIKNQFKSYQK-YWPLSDRTLVMIFEKASTRTRLSFEAGMQQLGGSAIYLNTRDSQLGRGEPVEDAAQVISRMSDIVMIRTFEQEIIERFAANSRVPVINGLTNEYHPCQILADIYTYIEHRGCIQGKTVAWVGDANNMCNTWLQAAEVLDFKVHVSTPPAY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_RHOBA (Ornithine carbamoyltransferase OS=Rhodopirellula baltica GN=argF PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35 Identity = 77/181 (42.54%), Postives = 114/181 (62.98%), Query Frame = 1 Query: 265 LHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 L + D + +IL A +KA LK G+R + + T++++F KPS+RTRVSFETG + LGG +++LG DD+ GKRE D RVL ++ D + R H+ + LA++ VP+IN LTD HPCQ +AD LT++E+ G ++G +V+VGDGNNV S L +++ F A P G+ Sbjct: 6 LTLFDLTPQELRQILATAQTLKAKLKQGERPAI-LERYTLALLFEKPSLRTRVSFETGMNHLGGSSLFLG-DDVGWGKRESPSDFTRVLGQFVDAVACRAKSHERVEQLAEYNAVPIINSLTDLCHPCQAIADVLTLLENFGEVKGRHMVFVGDGNNVSRSLALACAMLNIQFTLARPDGY 184
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_AZOSB (Ornithine carbamoyltransferase OS=Azoarcus sp. (strain BH72) GN=arcB PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35 Identity = 80/183 (43.72%), Postives = 110/183 (60.11%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILD-LAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +L SDF A + R +K K + + P +T+ MIF K S RTR+SFE G LGG AIYL D Q+G+ E DAA+V+ R +D++M R F QDI++ A ++ VPVINGLT+ HPCQI+AD T IEH G ++G V +VGD NN+ ++WL A V+ F + P G+ Sbjct: 7 YLQFSDFTAAEYDHVFQRTRWIKEKFKQYE-PYHPLFDRTLVMIFEKASTRTRLSFEAGMQQLGGSAIYLNTRDSQLGRGEPVEDAAQVISRMSDLVMIRTF-EQDIIERFAAYSRVPVINGLTNEYHPCQILADIYTFIEHRGSIKGKTVAWVGDSNNMCNTWLQAAEVLDFKVRVSTPPGY 187
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC1_PSESH (Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive OS=Pseudomonas syringae pv. phaseolicola GN=argF PE=1 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 6.258e-35 Identity = 74/182 (40.66%), Postives = 110/182 (60.44%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + D+ ++ ++ R E+K L G+ F P K + + MIF K S RTR+SFE G LGG AI+L D Q+G+ E D+A+V+ R D +M R + H ++ + A + VPVINGL+D HPCQ++AD T +EH G ++G V ++GDGNN+ +S++ A F ACP G+ Sbjct: 6 FLSMMDYTPDELLGLIRRGVELKDLRIRGEL-FEPLKNRVLGMIFEKSSTRTRLSFEAGMIQLGGQAIFLSHRDTQLGRGEPIADSAKVMSRMLDAVMIRTYAHSNLTEFAANSRVPVINGLSDDLHPCQLLADMQTFLEHRGSIKGKTVAWIGDGNNMCNSYIEAAIQFDFQLRVACPAGY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_STAMF (Ornithine carbamoyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=arcB PE=3 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 8.173e-35 Identity = 77/185 (41.62%), Postives = 118/185 (63.78%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGR-LEGTKVVYVGD-GNNVVHSWLLMASVIPFHFVCACPKGF 807 DFL ++D+ + ++ +L+ A +K +G+R G+ ++MIF K S RTR+SFET LGG A+YLG ++Q+G+ E D ARV+ RY D IMARV+ H+ + LA+++ VPVINGL+D HP Q + D TI+E G L K+V++GD G+NV+HS +L ++ + + PKG+ Sbjct: 9 DFLTLADYSREELLFVLETAKHLKQRYLAGERVIPLLPGRHLAMIFEKSSTRTRISFETAMRELGGDALYLGWKELQLGRGETIEDTARVVSRYVDGIMARVYEHEKLEKLAQYSRVPVINGLSDLLHPAQALTDIYTIMEKKGSDLSKLKIVFIGDGGDNVLHSLMLGIGILGGKIIISSPKGY 193
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PSESM (Ornithine carbamoyltransferase OS=Pseudomonas syringae pv. tomato GN=argF PE=3 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 74/182 (40.66%), Postives = 109/182 (59.89%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + D+ ++ ++ R E+K L G F P K + + MIF K S RTR+SFE G LGG AI+L D Q+G+ E D+A+V+ R D +M R + H ++ + A + VPVINGL+D HPCQ++AD T +EH G ++G V ++GDGNN+ +S++ A F ACP G+ Sbjct: 6 FLSMMDYTPDELLGLIRRGVELKDLRNRGVL-FEPLKNRVLGMIFEKSSTRTRLSFEAGMIQLGGQAIFLSHRDTQLGRGEPIADSAKVISRMLDAVMIRTYAHDNLTEFAANSRVPVINGLSDDLHPCQLLADMQTFLEHRGSIKGKTVAWIGDGNNMCNSYIEAAIQFDFQLRVACPAGY 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_METJA (Ornithine carbamoyltransferase OS=Methanocaldococcus jannaschii GN=argF PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 70/184 (38.04%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 265 LHISDFD---KATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +H+ D D + ++KI++ K + ++ +GK+++++F KPS RTR+SF+ LGGH + + ++I +GK+E +D A+V+ RY D I+ARV+ H+ + ++AK+++VPVIN L+D HPCQI+AD +TI E+ G+ +G K+ Y+GDGNNV +S +L ++++ PKG+ Sbjct: 1 MHLLDLDVLSREDVLKIIEYGIYFKKNRRKHEKIL---EGKSVAILFEKPSTRTRMSFDIAVYELGGHPLIMNQNEIHLGKKESIKDTAKVMGRYVDTIVARVYKHRHLEEMAKYSSVPVINALSDLAHPCQILADLMTIKEYKGKFKGLKIAYLGDGNNVCNSLILGSALVGMDTYVGTPKGY 181
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTCC_THEAC (Ornithine carbamoyltransferase, catabolic OS=Thermoplasma acidophilum GN=arcB PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 75/183 (40.98%), Postives = 111/183 (60.66%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + D +K + +I+D + E+K K+ RS+ + K + +IF KPS RTR S E LGGHA+YL P ++Q+G+ E D VL R+ D I R + H+++++LA+ ++PVIN L D HP QI+AD +TI E GR K Y+GDGNN+ +S +L A+++ A PKGF Sbjct: 5 DILSVLDMEK-DLSEIIDLSIELK---KNRYRSYESLRNKVLGLIFEKPSTRTRTSLEVAIDQLGGHAVYLNPSEMQLGRGETISDTGHVLSRFLDAIAYRAYDHRNVVELARSTSIPVINALDDVEHPLQIVADFMTIKEKKGRFTNLKFSYIGDGNNMANSLMLGAAILGTDMYVASPKGF 183
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PTC_ENTFA (Putrescine carbamoyltransferase OS=Enterococcus faecalis GN=ptcA PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.394e-34 Identity = 81/186 (43.55%), Postives = 113/186 (60.75%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D++ + K + ++D + ++K +K+G L K K++ MIF + S RTRVSFET LGGH YL P IQ+G E D +RVL R DI+MARV H I+DLA AT+PVING++DYNHP Q + D T++EH+ +LE KVV+VGD V S L+ + + +FV P+GF Sbjct: 4 DYVTTETYTKEEMHYLVDLSLKIKEAIKNGYYPQL-LKNKSLGMIFQQSSTRTRVSFETAMEQLGGHGEYLAPGQIQLGGHETIEDTSRVLSRLVDILMARVERHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDATQVCFSLGLITTKMGMNFVHFGPEGF 188 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |