FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_HALHL (Ornithine carbamoyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=argF PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.298e-37 Identity = 77/182 (42.31%), Postives = 110/182 (60.44%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + D I ++L RA E++ + ++G P +G+ + M+F K S RTRVSFE G + LGGHA++L P D Q+G+ E D ARV+ R D +M R FGH + A + PVINGL+D HPCQ++AD T EH G + +V ++GDGNN+ HSW+ A ++ F A P G+ Sbjct: 4 FLTLRDCSVDEIHQLLRRATELRDMHRAG-HLHQPLQGRVLGMVFEKSSTRTRVSFEAGMAQLGGHALFLSPRDTQLGRGEPVEDTARVVSRMVDAVMIRTFGHDMLERFAGHSAAPVINGLSDLCHPCQLLADLQTFTEHRGPITDRRVAWIGDGNNMCHSWIEAAGLLGFDLHIAAPPGY 184
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_SPHWW (Ornithine carbamoyltransferase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=argF PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37 Identity = 85/186 (45.70%), Postives = 111/186 (59.68%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVK----ALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL ++D A + +LD A K L K P G T++MIF K S RTRVSF+ LGG I + +Q+G+ E D ARVL RY D IM R H+ +DLA++A VPVINGLTD +HPCQIMAD TI+EH GR+EG ++GDGNNV+HS + S++ F CP+G+ Sbjct: 5 FLDLADAGAAGVRLMLDEAVSRKKARAGLPKGAPDRDAPLAGHTLAMIFEKNSTRTRVSFDMAMRQLGGTTIVMDAGSMQLGRGETIADTARVLSRYVDAIMIRTDDHRKAVDLARYADVPVINGLTDRSHPCQIMADLQTILEHKGRVEGLGWAWLGDGNNVLHSIVEAGSLLGFPVRIGCPEGY 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_MOUSE (Ornithine carbamoyltransferase, mitochondrial OS=Mus musculus GN=Otc PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37 Identity = 82/196 (41.84%), Postives = 117/196 (59.69%), Query Frame = 1 Query: 235 GKPKAEQT-----DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 GKP Q D L + +F I +L +A++K +K +GK++ MIF K S RTR+S ETGF+LLGGH +L DI +G E D ARVL D ++ARV+ D+ LAK A++P++NGL+D HP QI+AD LT+ EH G L+G + ++GDGNN++HS ++ A+ H A PKG+ Sbjct: 28 GKPVQSQVQLKGRDLLTLKNFTGEEIQYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPSFLTTQDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDTLAKEASIPIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPKGY 223
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_BOVIN (Ornithine carbamoyltransferase, mitochondrial OS=Bos taurus GN=OTC PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37 Identity = 80/193 (41.45%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 229 IHGKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 + K + + D L + +F I +L +A++K +K +GK++ MIF K S RTR+S ETGF+LLGGH +L DDI +G E D ARVL D ++ARV+ D+ LAK A++P++NGL+D HP QI+AD LT+ EH G L+G + ++GDGNN++HS ++ A+ H A PKG+ Sbjct: 31 LQDKVQLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTDDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDLLAKEASIPIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQVATPKGY 223
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: PTC_LACLA (Putrescine carbamoyltransferase OS=Lactococcus lactis subsp. lactis GN=ptcA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.920e-37 Identity = 86/186 (46.24%), Postives = 116/186 (62.37%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHV---GRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 DF+ D+ K I+ I+ ++KA +K+G L K K++ MIF + S RTRVSFET + LGGHA YL P IQ+G E D + VL R DIIMARV H+ + +LAK T+PV+NG++DYNHP Q + D T+IEH+ +LE KVV+VGD V S L+A+ + HFV PKG+ Sbjct: 8 DFITTEDYTKEEILDIVTLGLKIKAAIKNGYYPPL-LKNKSLGMIFQQTSTRTRVSFETAMTQLGGHAEYLAPGQIQLGGHETIEDTSTVLSRLLDIIMARVDRHESVNNLAKHTTIPVLNGMSDYNHPTQEVGDLTTMIEHLPAGKKLEDCKVVFVGDATQVCFSLGLIATKMGMHFVHFGPKGY 192
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_SULNB (Ornithine carbamoyltransferase OS=Sulfurovum sp. (strain NBC37-1) GN=argF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.920e-37 Identity = 80/183 (43.72%), Postives = 119/183 (65.03%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPF-KGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + DF+K +++++ A ++KA K + F+P+ + +T+ MIF K S RTRVSFETG LGG ++L +DIQ+G+ E +D +RV+ R D++M R F + + A ++ VPVINGLTD HP Q+M D LT+IE G+ + YVGDGNN+ HSWL++A+ + F A PKG+ Sbjct: 4 FLTLKDFNKEELLEMIALAQKIKAQTKQ--KQFVPYLERQTLGMIFEKSSTRTRVSFETGIYQLGGIGLFLSANDIQLGRGEPMKDTSRVISRMVDMVMIRTFEQSKLEEFAAYSKVPVINGLTDSYHPVQLMTDYLTMIE-FGKADDPICAYVGDGNNMTHSWLMLAAKLGFELRVATPKGY 183
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PIG (Ornithine carbamoyltransferase, mitochondrial (Fragment) OS=Sus scrofa GN=OTC PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.920e-37 Identity = 80/193 (41.45%), Postives = 118/193 (61.14%), Query Frame = 1 Query: 229 IHGKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 + K + + D L + +F I IL +A++K +K +GK++ MIF K S RTR+S ETGF+LLGGH +L DI +G E +D ARVL D ++ARV+ D+ LA+ A++P+INGL+D HP QI+AD LT+ EH G L+G + ++GDGNN++HS ++ A+ H A PKG+ Sbjct: 5 LQNKVQLKGRDLLTLKNFTGEEIKYILWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTQDIHLGVNESLKDTARVLSSMTDAVLARVYKQSDLDILAQEASIPIINGLSDLYHPIQILADYLTLQEHYGALKGLTLSWIGDGNNILHSIMMSAAKFGMHLQVATPKGY 197
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_CHICK (Ornithine carbamoyltransferase, mitochondrial OS=Gallus gallus GN=OTC PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.920e-37 Identity = 80/183 (43.72%), Postives = 114/183 (62.30%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + ++ + +L A+++K +K +GK+++MIF K S RTR+S ETGF+LLGGH+ +L DI +G E D ARVL + I+ARV+ H D+ + K AT+PVINGL+D HP QI+AD LT+ EH G L G + ++GDGNNV+HS + A+ + H A PKGF Sbjct: 41 DLLTLQNYTADELKYLLWVASDLKQRIKDKGEYLPLMQGKSLAMIFEKRSTRTRLSAETGFALLGGHSSFLTKQDIHLGTNESLTDTARVLSSMTNAILARVYKHNDLDLMTKEATIPVINGLSDLYHPLQILADYLTLQEHYGGLNGLTIAWIGDGNNVLHSIMTSAAKLGMHLRIATPKGF 223
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_AGRT5 (Ornithine carbamoyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=argF PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.920e-37 Identity = 83/186 (44.62%), Postives = 110/186 (59.14%), Query Frame = 1 Query: 247 AEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKG 804 A FL +S + ILD A K K+G P GK ++MIF KPS RTRVSF+ G LGG ++L ++Q+G+ E D A+VL RY D IM R H +L+LA+ ATVPVINGLTD HPCQIMAD +T EH G ++G + + GDGNNV+HS++ ++ + A P G Sbjct: 2 ASPKHFLDLSAVGPQDLRTILDDARARKVATKAGTAE-KPLAGKMLAMIFEKPSTRTRVSFDVGMRQLGGETLFLSGTEMQLGRAETIGDTAKVLSRYVDAIMIRTTDHSRLLELAEHATVPVINGLTDDTHPCQIMADIMTFEEHRGPVKGKTIAWTGDGNNVLHSFVEGSARFGYRMTMAVPMG 186
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PICTO (Ornithine carbamoyltransferase OS=Picrophilus torridus GN=argF PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 5.119e-37 Identity = 80/167 (47.90%), Postives = 108/167 (64.67%), Query Frame = 1 Query: 307 LDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 L+ E+ LK DR+ + K ++MIF KPS RTR S E L GHAIYL P+D+Q+G+ E D ARVL R+ DII R F H D+++LA+ ATVPV+N L + HP QI+AD +T+ E RL+G K+ Y+GDGNN+ +S LL +S++ ACPKGF Sbjct: 15 LEDIIELSIKLKK-DRTIKFSEKKILAMIFEKPSTRTRNSLEVAMEQLNGHAIYLNPNDMQIGRGETIADTARVLSRFVDIISYRAFNHDDVVELARHATVPVLNALDNLEHPMQIVADFMTVYEKKHRLKGLKLAYIGDGNNMANSLLLGSSILGVDISIACPKGF 180 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |