FC878130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PEA (Ornithine carbamoyltransferase, chloroplastic OS=Pisum sativum GN=ARGF PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 9.807e-97 Identity = 172/220 (78.18%), Postives = 194/220 (88.18%), Query Frame = 1 Query: 148 ASAALTFPVLRRSITCQASSATSAPNSIHGKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +S++ + P R I+CQASSA +A +++ K DF+HI DFDK TI+KILDRA EVK LLKSGDR+F PF+GKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGP+DIQMGKREETRD ARVL RYNDIIMARVF HQDILDLAK+A+VPVINGLTDYNHP QIMADALT+IEH+GR EGTKVVYVGDGNN+VHSWLL+A+V+PFHFVCACPKGF Sbjct: 37 SSSSSSSPSPLRRISCQASSAPAAESTLTAKVGNGLKDFIHIDDFDKETILKILDRAIEVKTLLKSGDRTFRPFEGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPNDIQMGKREETRDVARVLSRYNDIIMARVFSHQDILDLAKYASVPVINGLTDYNHPVQIMADALTMIEHIGRFEGTKVVYVGDGNNIVHSWLLLAAVVPFHFVCACPKGF 256
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_ARATH (Ornithine carbamoyltransferase, chloroplastic OS=Arabidopsis thaliana GN=OTC PE=1 SV=2) HSP 1 Score: 340.887 bits (873), Expect = 5.037e-93 Identity = 169/232 (72.84%), Postives = 198/232 (85.34%), Query Frame = 1 Query: 127 SRFPATS----ASAALTFPVLRR-SITCQASSATSAPNSIHGKPKAEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 S FP T+ ++ +L P L R ++CQASS TS + K K++ DFL I DFD ATI ILD+A+EVKALLKSG+R++LPFKGK+MSMIFAKPSMRTRVSFETGF LLGGHA+YLGP+DIQMGKREETRD ARVL RYNDIIMARVF HQDILDLA +++VPV+NGLTD+NHPCQIMADALT+IEH+G++EGTKVVYVGDGNN+VHSWL +ASVIPFHFVCACPKG+ Sbjct: 25 SFFPGTTLRRFSAVSLPSPALPRLRVSCQASSVTSPSSPSDVKGKSDLKDFLAIDDFDTATIKTILDKASEVKALLKSGERNYLPFKGKSMSMIFAKPSMRTRVSFETGFFLLGGHALYLGPNDIQMGKREETRDVARVLSRYNDIIMARVFAHQDILDLANYSSVPVVNGLTDHNHPCQIMADALTMIEHIGQVEGTKVVYVGDGNNMVHSWLELASVIPFHFVCACPKGY 256
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_ANOFW (Ornithine carbamoyltransferase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=argF PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.457e-47 Identity = 92/183 (50.27%), Postives = 125/183 (68.31%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 DFL ++D+ K I +L A E+K ++G+R + P GKT++MIF KPS RTRVSFE G LGGHA++L D+Q+G+ E D ARVL Y D IM R F H+ + +LA +AT+PVINGLTD +HPCQ +AD LTI E G+L+G K+ Y+GDGNN+ H+ +L A+ + H A PKG+ Sbjct: 13 DFLTLADYSKEEIEYLLHLAVELKEKQQNGER-YTPLSGKTLAMIFEKPSTRTRVSFEVGMVQLGGHALHLSSRDLQIGRGETIADTARVLSEYVDAIMIRTFEHEKVEELAHYATIPVINGLTDDDHPCQALADLLTIYEVKGKLQGLKLAYIGDGNNMAHALMLAAAKVGMHCAVASPKGY 194
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_CHLTE (Ornithine carbamoyltransferase OS=Chlorobium tepidum GN=argF PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.293e-45 Identity = 93/189 (49.21%), Postives = 128/189 (67.72%), Query Frame = 1 Query: 247 AEQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRS--FLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 +++ DFL + D A I+++ D + +K ++ S F P + KT++MIF KPS+RTRVSFE G LGGHAI L I +G+RE D AR+L RYND I+AR+ H+ I LAK A +PVIN LTD +HPCQ++ADA T+ E + KVV+VGDGNNV +SW+ +A ++PFHFV ACP+G+ Sbjct: 10 SKKRDFLGFTGLDAAKIIELFDYSLFIKQQRETNRNSDEFRPIRHKTVAMIFNKPSLRTRVSFELGVYELGGHAISLEGKSIGVGERESIEDIARLLSRYNDAIVARLHEHEIIETLAKHADIPVINALTDLSHPCQVLADAFTLYEKGLWRDDIKVVFVGDGNNVANSWIELAGILPFHFVLACPEGY 198
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PYRFU (Ornithine carbamoyltransferase OS=Pyrococcus furiosus GN=argF PE=1 SV=6) HSP 1 Score: 181.03 bits (458), Expect = 6.670e-45 Identity = 94/183 (51.37%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + D+ I IL+ A K K G L +GKT++MIF KPS RTRVSFE + LGGHA+YL D+Q+ + E D ARVL RY D IMARV+ H+D+ DLAK+ATVPVINGL+D++HPCQ +AD +TI E G ++G KVVYVGDGNNV HS ++ + + V A P+G+ Sbjct: 9 DLLCLQDYTAEEIWTILETAKMFKIWQKIGKPHRL-LEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGY 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PYRAB (Ornithine carbamoyltransferase OS=Pyrococcus abyssi GN=argF PE=3 SV=4) HSP 1 Score: 180.259 bits (456), Expect = 1.138e-44 Identity = 93/183 (50.82%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + D+ I IL+ A +K K G L +GKT++MIF KPS RTRVSFE + LGGHA+YL D+Q+ + E D ARVL RY D IMARV+ H+D+ DLAK+A+VPVINGL+D++HPCQ +AD +TI E G ++G KVVYVGDGNNV HS ++ + + V A P+G+ Sbjct: 9 DLLCLQDYTPEEIWTILETAKMLKIWQKIGKPHRL-LEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYDHKDVEDLAKYASVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPEGY 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PYRKO (Ornithine carbamoyltransferase OS=Pyrococcus kodakaraensis GN=argF PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.941e-44 Identity = 91/183 (49.73%), Postives = 124/183 (67.76%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + DF + + IL A +K K G + +GKT++MIF KPS RTR+SFE G LGG+ +YL D+Q+ + E D ARVL RY D IMARVF H+D+ DLAK+A+VPVINGL+D++HPCQ +AD TI+E GR++G K+VYVGDGNNV HS ++ + + + V A P+G+ Sbjct: 9 DVLCLQDFTREELETILKTAEMMKIWNKIG-KPHRVLEGKTLAMIFQKPSTRTRISFEVGIYQLGGYGLYLNAQDLQLRRGETIADTARVLSRYVDGIMARVFDHKDVEDLAKYASVPVINGLSDFSHPCQALADYQTILEKKGRIQGLKIVYVGDGNNVAHSLMIAGTKLGANVVVATPEGY 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PYRHO (Ornithine carbamoyltransferase OS=Pyrococcus horikoshii GN=argF PE=3 SV=3) HSP 1 Score: 179.489 bits (454), Expect = 1.941e-44 Identity = 93/183 (50.82%), Postives = 122/183 (66.67%), Query Frame = 1 Query: 259 DFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 D L + D+ I IL+ A K K G L +GKT++MIF KPS RTRVSFE + LGGHA+YL D+Q+ + E D ARVL RY D IMARV+ H+D+ DLAK+A+VPVINGL+D++HPCQ +AD +TI E G ++G KVVYVGDGNNV HS ++ + + V A P+G+ Sbjct: 9 DLLCLQDYTPEEIWTILETAKMFKIWQKIGKPHRL-LEGKTLAMIFQKPSTRTRVSFEVAMAHLGGHALYLNAQDLQLRRGETIADTARVLSRYVDAIMARVYAHKDVEDLAKYASVPVINGLSDFSHPCQALADYMTIWEKKGTIKGVKVVYVGDGNNVCHSLMIAGTKLGADVVVATPEGY 190
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_HALWD (Ornithine carbamoyltransferase OS=Haloquadratum walsbyi (strain DSM 16790) GN=arcB PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.311e-44 Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 250 EQTDFLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 + ++FL I D + ILDRA AL GD + P G+T+ M+F KPS RTR+SFETG + LGGHAI+LGPDDIQ+G E D ARVL Y D++MAR+F H D+L++A A +PVINGLTD HPCQ +AD LTI E G + VV++GDGNNV S+++ A+++ P G+ Sbjct: 3 KSSNFLDIDDLTTDELQTILDRAT---ALKHGGDNAQFP--GQTLGMLFEKPSTRTRISFETGMTQLGGHAIFLGPDDIQLGHGEPLSDTARVLSGYVDVVMARLFNHDDLLEIAAHADIPVINGLTDDAHPCQTLADLLTIKEEFGGFDDVTVVWIGDGNNVGQSFVIGAAMVGLDLTVVTPSGY 183
BLAST of FC878130 vs. ExPASy Swiss-Prot
Match: OTC_PELPD (Ornithine carbamoyltransferase OS=Pelobacter propionicus (strain DSM 2379) GN=argF PE=3 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.643e-43 Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 1 Query: 262 FLHISDFDKATIMKILDRAAEVKALLKSGDRSFLPFKGKTMSMIFAKPSMRTRVSFETGFSLLGGHAIYLGPDDIQMGKREETRDAARVLCRYNDIIMARVFGHQDILDLAKFATVPVINGLTDYNHPCQIMADALTIIEHVGRLEGTKVVYVGDGNNVVHSWLLMASVIPFHFVCACPKGF 807 FL + D+ K + ++L A E+K K G L KGKT++MIF K S RTR+SFE G LGGH +++ QMG+ E +D ARVL RY D IM R FG + + +LA +ATVPVINGLTD HPCQIMAD +T++EH G G K +VGDGNN+ ++W+ A++ F ACP+G+ Sbjct: 5 FLSLHDYTKEELDRLLALAIELKQEQKQGGEHHL-LKGKTLAMIFDKSSTRTRISFEVGIYQLGGHGLFISTGTSQMGRGEPLKDTARVLSRYCDGIMIRTFGQEIVDELAAYATVPVINGLTDLFHPCQIMADVMTVMEHKGGYAGLKFAWVGDGNNMANTWIEAAAIFGFDLALACPQGY 185 The following BLAST results are available for this feature:
BLAST of FC878130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878130 ID=FC878130; Name=FC878130; organism=Citrus clementina; type=EST; length=809bpback to top |