FC878131

Overview
NameFC878131
Unique NameFC878131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12412 contig Ccv1_Contig12412:102..919. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4527_BACAN (Putative metalloprotease BA_4527/GBAA_4527/BAS4202 OS=Bacillus anthracis GN=BA_4527 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4436_BACC7 (Putative metalloprotease BCAH187_A4436 OS=Bacillus cereus (strain AH187) GN=BCAH187_A4436 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4414_BACC3 (Putative metalloprotease BCA_4414 OS=Bacillus cereus (strain 03BB102) GN=BCA_4414 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4383_BACC1 (Putative metalloprotease BCE_4383 OS=Bacillus cereus (strain ATCC 10987) GN=BCE_4383 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4325_BACC0 (Putative metalloprotease BCAH820_4325 OS=Bacillus cereus (strain AH820) GN=BCAH820_4325 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4089_BACCQ (Putative metalloprotease BCQ_4089 OS=Bacillus cereus (strain Q1) GN=BCQ_4089 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4050_BACCZ (Putative metalloprotease BCE33L4050 OS=Bacillus cereus (strain ZK / E33L) GN=BCE33L4050 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4040_BACHK (Putative metalloprotease BT9727_4040 OS=Bacillus thuringiensis subsp. konkukian GN=BT9727_4040 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y3893_BACAH (Putative metalloprotease BALH_3893 OS=Bacillus thuringiensis (strain Al Hakam) GN=BALH_3893 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 47/106 (44.34%), Postives = 72/106 (67.92%), Query Frame = 3 
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  ELS+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141
[Close]
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2373_HELMI (Putative metalloprotease Helmi_23730 OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=Helmi_23730 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.336e-16
Identity = 55/126 (43.65%), Postives = 73/126 (57.94%), Query Frame = 3 
Query:  441 LMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQ----------HVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDH 788
            L +LAF  L++  Y   DT           E+S++  N+E IR+LN E+R+ D  TDVLS +           H  +      +LGDI+ISVETA RQA+E GHSL  E+  L VHG+LHLLG+DH
Sbjct:   26 LEQLAFACLEEVGYPLEDT-----------EISLVLTNDEKIRRLNAEYRNIDQPTDVLSFAMEEGLDDEADFHFDDPTAG-KVLGDIIISVETAERQAQEYGHSLEREMGFLFVHGMLHLLGYDH 139
The following BLAST results are available for this feature:
BLAST of FC878131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
Y4527_BACAN1.336e-1644.34Putative metalloprotease BA_4527/GBAA_4527/BAS4202... [more]
Y4436_BACC71.336e-1644.34Putative metalloprotease BCAH187_A4436 OS=Bacillus... [more]
Y4414_BACC31.336e-1644.34Putative metalloprotease BCA_4414 OS=Bacillus cere... [more]
Y4383_BACC11.336e-1644.34Putative metalloprotease BCE_4383 OS=Bacillus cere... [more]
Y4325_BACC01.336e-1644.34Putative metalloprotease BCAH820_4325 OS=Bacillus ... [more]
Y4089_BACCQ1.336e-1644.34Putative metalloprotease BCQ_4089 OS=Bacillus cere... [more]
Y4050_BACCZ1.336e-1644.34Putative metalloprotease BCE33L4050 OS=Bacillus ce... [more]
Y4040_BACHK1.336e-1644.34Putative metalloprotease BT9727_4040 OS=Bacillus t... [more]
Y3893_BACAH1.336e-1644.34Putative metalloprotease BALH_3893 OS=Bacillus thu... [more]
Y2373_HELMI1.336e-1643.65Putative metalloprotease Helmi_23730 OS=Heliobacte... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878131 ID=FC878131; Name=FC878131; organism=Citrus clementina; type=EST; length=818bp
CAAAAGATTAAGCCTACATGCTCCCTCGCCTCTCCTCTGTACTCCGCGCT
CTCCCTTCCTCGACCGCTCCAATGGCGCGTATAATTTCACGAGCAACTCC
TCTACCTGTTACCCGTACCTCGTACGCCGCCATTTCCTTCCTCAACTCAC
CTTCGATCTCTTACAAAACGCACCGTTTGGATGCATCTTCTCCATCGAAT
TCGTCGCCGCTATTCGGTCGGGGATTCCGCGTGCTGTGTAGAAGAGAAGA
GGAGAGCGTGGTGCGATCGTCGCGAAAGGTTTTTGCTGAACAGAGAGGGT
ACCGCAAGGCGCGGAGACGAGTGGCGAAGAGCAAGCAGAAGGAATTGGAG
CTCAATGTCAGCATTTGCATCGAAGACGAGCTGCCTGATGATCCCGAAGT
ATTGAATATTGCAGAAATGCTTCGTCTTAATGCACCAACTTTAATGAAGT
TAGCATTTGATAGTTTGAAAGATTCGACATATAAAACAAGAGATACTGCC
GTAGAAGATGTTGGTGGGTTTGAAAGCATTGAGTTGTCTATACTCTTTTG
CAACAATGAGTTCATTCGTAAACTTAACAAAGAATGGAGGGATGAGGACC
ATGCCACTGATGTTCTCTCCATGTCACAACATGTCCCTGAACTCAAACTT
CCAATTCTTATGTTAGGTGACATTGTCATTTCTGTTGAGACTGCTGCAAG
ACAAGCAGAGGAAAGAGGGCACTCACTTCTTGATGAAATACGCATCCTTA
TGGTTCATGGCTTGTTGCATCTTTTGGGTTTCGATCATGAGATTAGCGAA
AAAGCTGAAGCAGAGATG
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