FC878131

Overview
NameFC878131
Unique NameFC878131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2063_BREBN (Putative metalloprotease BBR47_20630 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=BBR47_20630 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  501 VEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVP---ELKLPI---------LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +E+V G    E+ +   NNE I +LN+++R  D  TDVLS + + P   E+++ I          MLGDI+ISV  A  QAE+ GHS   E+  L VHG LHLLG+DH   E+ E EM
Sbjct:   32 LEEVQG----EVVVTLVNNERIHELNRDYRGVDRPTDVLSFAMNEPGEGEMEIFIDEDEASEFPNMLGDIIISVPKAHEQAEDYGHSFERELGFLTVHGFLHLLGYDHGTPEE-EKEM 144          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1953_OCEIH (Putative metalloprotease OB1953 OS=Oceanobacillus iheyensis GN=OB1953 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 51/123 (41.46%), Postives = 72/123 (58.54%), Query Frame = 3
Query:  471 DSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPI------LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            D   +  D A +  G     ELS+ F +N+ I+ LN+ +R +D  TDV+S + Q   E ++ I      L+LGDIVISV+ A  Q+ E  HSL  E+  L VHG LHLLG+DH + E+ E +M
Sbjct:   18 DLIQRLLDFAAQKEGVTSEAELSVNFVDNKEIQVLNRNYRQKDTPTDVISFAMQESNEDEMEIIGADGPLVLGDIVISVDKAKEQSIEYDHSLERELGFLAVHGFLHLLGYDH-MKEEDEKKM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1253_LEPBL (Putative metalloprotease LBL_1253 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=LBL_1253 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMS--------QHVPELK-------LPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            EL +L   +  +RK+N+  R +D  TDVLS          Q+V + +       LP + LG+IVISV+T  +QA E GHS+ DE   L+VHG LHLLG+DHE  E+ E  M
Sbjct:   19 ELGLLLVGDSDMRKINRLRRGKDKTTDVLSFPLEFDSAPLQNVLQKRTGFDSNSLPPIALGEIVISVDTLEKQAVEIGHSVKDEFYRLLVHGFLHLLGYDHERGEEEERIM 129          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1201_LEPBJ (Putative metalloprotease LBJ_1201 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=LBJ_1201 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.208e-14
Identity = 48/111 (43.24%), Postives = 65/111 (58.56%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMS--------QHVPELK-------LPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            EL +L   +  +RK+N+  R +D  TDVLS          Q+V + +       LP + LG+IVISV+T  +QA E GHS+ DE   L+VHG LHLLG+DHE  E+ E  M
Sbjct:   19 ELGLLLVGDSDMRKINRLRRGKDKTTDVLSFPLEFDSAPLQNVLQKRTGFDSNSLPPIALGEIVISVDTLEKQAVEIGHSVKDEFYRLLVHGFLHLLGYDHERGEEEERIM 129          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y598_EXISA (Putative metalloprotease EAT1b_0598 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=EAT1b_0598 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPILM-------LGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            E  ELS+ +  N  I ++N+EWR +D  TDV+S +   + + ++  ++       LGD+VISVE    QA + GHS   E+  L +HG LHLLG+DH   E+ EAEM
Sbjct:   35 EPSELSVTYLTNAEIHEVNREWRGKDAPTDVISFAFDEMGDEEMDFMLDEDEPHLLGDLVISVERCREQAADYGHSFERELGFLAIHGFLHLLGYDHMTPEE-EAEM 140          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4952_PSEPF (Putative metalloprotease Pfl01_4952 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_4952 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            E++I   + +  R+LN  WR +D+AT+VLS    VP+  L I +LGD+VI V    R+A E+G  L      L++HG LHLLG+DH   E+AE
Sbjct:   36 EMTIRLVDEDEGRELNHTWRHKDYATNVLSFPAEVPDEFLDIPLLGDLVICVAVVEREATEQGKELKAHWAHLVIHGCLHLLGYDHIDDEEAE 128          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2092_DEIRA (Putative metalloprotease DR_2092 OS=Deinococcus radiodurans GN=DR_2092 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 47/112 (41.96%), Postives = 64/112 (57.14%), Query Frame = 3
Query:  465 LKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISE 800
            L+ +   +   A++  GG E  E++++   +  IR L  E   ED ATDVLS     P        LGDI+IS++TA RQAE RGHSL  E+ +L  HGL HL+G DH  +E
Sbjct:   14 LRPALRASLSAAMQHFGG-EEREVTVVLVGDPEIRALKLEHWGEDAATDVLSFPTWEPGDPFMPPHLGDIIISLDTAQRQAESRGHSLTREVALLASHGLTHLVGHDHPHAE 124          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1222_MACCJ (Putative metalloprotease MCCL_1222 OS=Macrococcus caseolyticus (strain JCSC5402) GN=MCCL_1222 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 46/111 (41.44%), Postives = 66/111 (59.46%), Query Frame = 3
Query:  498 AVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL----MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            A E  G  E  E+++ F +   I+ +NK +R++D  TDV+S +    E    +     +LGDI+I V+ A  QAEE GHS   E+  L +HGLLHLLG+DH ++E  EA M
Sbjct:   28 AAEQEGIDEEAEVAVSFVDENEIQAINKAYRNKDAVTDVISFALEEGEDDFEMSDEPRVLGDIIICVKRALEQAEEYGHSFERELGFLSLHGLLHLLGYDH-MNESDEARM 137          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1186_STAS1 (Putative metalloprotease SSP1186 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1186 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 43/104 (41.35%), Postives = 68/104 (65.38%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLS--MSQHVPEL---KLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            E  ELS+ F + + I+++NK +RD+D  TDV+S  + +  PE+   ++P  +LGDI+I  + A  QA+  GHS   E+  L +HG LHLLG+DH ++E+ E +M
Sbjct:   36 EEAELSVTFVDKDEIQEINKMYRDKDKVTDVISFALEEDEPEITGIEMP-RVLGDIIICTDVAQEQADSYGHSFERELGFLALHGFLHLLGYDH-MNEQDEKQM 137          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y017_RHILW (Putative metalloprotease Rleg2_0017 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=Rleg2_0017 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.108e-14
Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQH-VPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            E+S++F ++  I+ +N EWR +D AT+VLS     V   K+P  MLGDI+I+ ET  R+  E   S  D +  L+VHG LHLLG+DH  S++AE
Sbjct:   50 EVSLVFTDDASIQDINAEWRGKDKATNVLSFPAFPVRPGKMPGPMLGDIIIARETVERETIELEKSFDDHLTHLLVHGFLHLLGYDHMNSDEAE 143          
The following BLAST results are available for this feature:
BLAST of FC878131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
Y2063_BREBN6.208e-1443.22Putative metalloprotease BBR47_20630 OS=Brevibacil... [more]
Y1953_OCEIH6.208e-1441.46Putative metalloprotease OB1953 OS=Oceanobacillus ... [more]
Y1253_LEPBL6.208e-1443.24Putative metalloprotease LBL_1253 OS=Leptospira bo... [more]
Y1201_LEPBJ6.208e-1443.24Putative metalloprotease LBJ_1201 OS=Leptospira bo... [more]
Y598_EXISA8.108e-1441.12Putative metalloprotease EAT1b_0598 OS=Exiguobacte... [more]
Y4952_PSEPF8.108e-1444.09Putative metalloprotease Pfl01_4952 OS=Pseudomonas... [more]
Y2092_DEIRA8.108e-1441.96Putative metalloprotease DR_2092 OS=Deinococcus ra... [more]
Y1222_MACCJ8.108e-1441.44Putative metalloprotease MCCL_1222 OS=Macrococcus ... [more]
Y1186_STAS18.108e-1441.35Putative metalloprotease SSP1186 OS=Staphylococcus... [more]
Y017_RHILW8.108e-1445.74Putative metalloprotease Rleg2_0017 OS=Rhizobium l... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878131 ID=FC878131; Name=FC878131; organism=Citrus clementina; type=EST; length=818bp
CAAAAGATTAAGCCTACATGCTCCCTCGCCTCTCCTCTGTACTCCGCGCT
CTCCCTTCCTCGACCGCTCCAATGGCGCGTATAATTTCACGAGCAACTCC
TCTACCTGTTACCCGTACCTCGTACGCCGCCATTTCCTTCCTCAACTCAC
CTTCGATCTCTTACAAAACGCACCGTTTGGATGCATCTTCTCCATCGAAT
TCGTCGCCGCTATTCGGTCGGGGATTCCGCGTGCTGTGTAGAAGAGAAGA
GGAGAGCGTGGTGCGATCGTCGCGAAAGGTTTTTGCTGAACAGAGAGGGT
ACCGCAAGGCGCGGAGACGAGTGGCGAAGAGCAAGCAGAAGGAATTGGAG
CTCAATGTCAGCATTTGCATCGAAGACGAGCTGCCTGATGATCCCGAAGT
ATTGAATATTGCAGAAATGCTTCGTCTTAATGCACCAACTTTAATGAAGT
TAGCATTTGATAGTTTGAAAGATTCGACATATAAAACAAGAGATACTGCC
GTAGAAGATGTTGGTGGGTTTGAAAGCATTGAGTTGTCTATACTCTTTTG
CAACAATGAGTTCATTCGTAAACTTAACAAAGAATGGAGGGATGAGGACC
ATGCCACTGATGTTCTCTCCATGTCACAACATGTCCCTGAACTCAAACTT
CCAATTCTTATGTTAGGTGACATTGTCATTTCTGTTGAGACTGCTGCAAG
ACAAGCAGAGGAAAGAGGGCACTCACTTCTTGATGAAATACGCATCCTTA
TGGTTCATGGCTTGTTGCATCTTTTGGGTTTCGATCATGAGATTAGCGAA
AAAGCTGAAGCAGAGATG
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