FC878131

Overview
NameFC878131
Unique NameFC878131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y043_RHISN (Putative metalloprotease NGR_c00430 OS=Rhizobium sp. (strain NGR234) GN=NGR_c00430 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.359e-13
Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQH-VPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            ELS++F +++ IR++N EWR++D  T+VLS     V    +P  MLGDI+++ ET  R+A E      + +  L+VHG LHL G+DH   ++AE
Sbjct:   50 ELSLVFTDDQSIREINAEWRNQDKPTNVLSFPAFPVTPGNMPGPMLGDIIVAYETLEREAAEMEKPFEEHLTHLLVHGFLHLFGYDHIEDDEAE 143          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y711_STRGC (Putative metalloprotease SGO_0711 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=SGO_0711 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 53/158 (33.54%), Postives = 79/158 (50.00%), Query Frame = 3
Query:  402 LNIAEMLRLNAPTLMKLAFDSLKDSTYKTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPI-------------------LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            + I +   L +  ++K   D L+ +  KT         G E  E+++ F  NE   +LN E+RD D  TDV+S+ ++ PEL + +                     +G++ ISV+ A  QAEE GHS   E+  L VHG LH+ G+DH   E+ EAEM
Sbjct:    3 IEIVDETGLVSEEIIKQTQDILEFAAQKT---------GKEKKEMAVTFVTNERSHELNLEYRDTDRPTDVISL-EYKPELDIAVDEEDLLNHPELAEMLDDFDAYIGELFISVDKAREQAEEYGHSFKREMGFLAVHGFLHINGYDHYTPEE-EAEM 149          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y5434_PSEF5 (Putative metalloprotease PFL_5434 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=PFL_5434 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            EL+I   +    R+LN  WR +D+AT+VLS    VP+  L I +LGD+VI +    R+A E+G  L      L++HG LHLLG+DH   ++AE
Sbjct:   36 ELTIRLVDEAEGRELNHTWRHKDYATNVLSFPADVPDELLDIPLLGDLVICIAVVEREAAEQGKELQAHWAHLVIHGCLHLLGYDHIDDDEAE 128          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y487_ACIB3 (Putative metalloprotease ABBFA_000487 OS=Acinetobacter baumannii (strain AB307-0294) GN=ABBFA_000487 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  483 KTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL---MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            K  +T +  VG  E  E+ I   + E   +LN ++R++D  T+VLS    +PE  LP+L    LGD+VI +    ++A E+  +  +    L+VHG+LHLLG+DHE S++   EM
Sbjct:   25 KIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y460_ACIBY (Putative metalloprotease ABAYE0460 OS=Acinetobacter baumannii (strain AYE) GN=ABAYE0460 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  483 KTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL---MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            K  +T +  VG  E  E+ I   + E   +LN ++R++D  T+VLS    +PE  LP+L    LGD+VI +    ++A E+  +  +    L+VHG+LHLLG+DHE S++   EM
Sbjct:   25 KIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y3479_ACIB5 (Putative metalloprotease AB57_3479 OS=Acinetobacter baumannii (strain AB0057) GN=AB57_3479 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  483 KTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL---MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            K  +T +  VG  E  E+ I   + E   +LN ++R++D  T+VLS    +PE  LP+L    LGD+VI +    ++A E+  +  +    L+VHG+LHLLG+DHE S++   EM
Sbjct:   25 KIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y3452_SALTO (Putative metalloprotease Strop_3452 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=Strop_3452 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 46/117 (39.32%), Postives = 66/117 (56.41%), Query Frame = 3
Query:  498 AVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQ------HVPELKLPI----LMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            A++++G  +  ELS+L  + +++ +LN  W   D  TDVL+         H P           +LGDIV+  E AA+QA   GHS  DE+ +L VHG+LHLLG+DH   E+ E EM
Sbjct:   25 ALDEMGVNQLAELSVLLVDIDYMAELNHRWMGGDGPTDVLAFPMDEGSVDHGPGENAAAGAEPALLGDIVLCPEVAAKQAVTAGHSTADELHLLTVHGVLHLLGYDHAEPEE-EREM 140          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y3227_ACIBC (Putative metalloprotease ACICU_03227 OS=Acinetobacter baumannii (strain ACICU) GN=ACICU_03227 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  483 KTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL---MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            K  +T +  VG  E  E+ I   + E   +LN ++R++D  T+VLS    +PE  LP+L    LGD+VI +    ++A E+  +  +    L+VHG+LHLLG+DHE S++   EM
Sbjct:   25 KIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y3031_ACIBT (Putative metalloprotease A1S_3031 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=A1S_3031 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 3
Query:  483 KTRDTAVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPIL---MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            K  +T +  VG  E  E+ I   + E   +LN ++R++D  T+VLS    +PE  LP+L    LGD+VI +    ++A E+  +  +    L+VHG+LHLLG+DHE S++   EM
Sbjct:   25 KIIETTLRHVGYKEDCEIGIACVDLEESHQLNLQYREKDKPTNVLSFPSDIPEEVLPMLDALPLGDLVICIPVVLQEALEQKKTAQNHFAHLLVHGVLHLLGYDHETSDEDAEEM 139          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1968_ARTCA (Putative metalloprotease Achl_1968 OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=Achl_1968 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13
Identity = 44/98 (44.90%), Postives = 58/98 (59.18%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLS-----MSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            ELSIL  +   + KL+ E  DE  ATDVLS     ++   P+   P  MLGDI I  + A  QA+  GH+L DE+ +L  HG+LHLLG+DH   E+ E
Sbjct:   36 ELSILLVDEPAMEKLHIELMDEPGATDVLSVPMDDLTPGTPDRPTPQGMLGDIAICPQVAQVQAKNAGHALQDEMLLLTTHGILHLLGYDHAEPEEKE 133          
The following BLAST results are available for this feature:
BLAST of FC878131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
Y043_RHISN2.359e-1341.49Putative metalloprotease NGR_c00430 OS=Rhizobium s... [more]
Y711_STRGC3.081e-1333.54Putative metalloprotease SGO_0711 OS=Streptococcus... [more]
Y5434_PSEF53.081e-1343.01Putative metalloprotease PFL_5434 OS=Pseudomonas f... [more]
Y487_ACIB33.081e-1337.39Putative metalloprotease ABBFA_000487 OS=Acinetoba... [more]
Y460_ACIBY3.081e-1337.39Putative metalloprotease ABAYE0460 OS=Acinetobacte... [more]
Y3479_ACIB53.081e-1337.39Putative metalloprotease AB57_3479 OS=Acinetobacte... [more]
Y3452_SALTO3.081e-1339.32Putative metalloprotease Strop_3452 OS=Salinispora... [more]
Y3227_ACIBC3.081e-1337.39Putative metalloprotease ACICU_03227 OS=Acinetobac... [more]
Y3031_ACIBT3.081e-1337.39Putative metalloprotease A1S_3031 OS=Acinetobacter... [more]
Y1968_ARTCA3.081e-1344.90Putative metalloprotease Achl_1968 OS=Arthrobacter... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878131 ID=FC878131; Name=FC878131; organism=Citrus clementina; type=EST; length=818bp
CAAAAGATTAAGCCTACATGCTCCCTCGCCTCTCCTCTGTACTCCGCGCT
CTCCCTTCCTCGACCGCTCCAATGGCGCGTATAATTTCACGAGCAACTCC
TCTACCTGTTACCCGTACCTCGTACGCCGCCATTTCCTTCCTCAACTCAC
CTTCGATCTCTTACAAAACGCACCGTTTGGATGCATCTTCTCCATCGAAT
TCGTCGCCGCTATTCGGTCGGGGATTCCGCGTGCTGTGTAGAAGAGAAGA
GGAGAGCGTGGTGCGATCGTCGCGAAAGGTTTTTGCTGAACAGAGAGGGT
ACCGCAAGGCGCGGAGACGAGTGGCGAAGAGCAAGCAGAAGGAATTGGAG
CTCAATGTCAGCATTTGCATCGAAGACGAGCTGCCTGATGATCCCGAAGT
ATTGAATATTGCAGAAATGCTTCGTCTTAATGCACCAACTTTAATGAAGT
TAGCATTTGATAGTTTGAAAGATTCGACATATAAAACAAGAGATACTGCC
GTAGAAGATGTTGGTGGGTTTGAAAGCATTGAGTTGTCTATACTCTTTTG
CAACAATGAGTTCATTCGTAAACTTAACAAAGAATGGAGGGATGAGGACC
ATGCCACTGATGTTCTCTCCATGTCACAACATGTCCCTGAACTCAAACTT
CCAATTCTTATGTTAGGTGACATTGTCATTTCTGTTGAGACTGCTGCAAG
ACAAGCAGAGGAAAGAGGGCACTCACTTCTTGATGAAATACGCATCCTTA
TGGTTCATGGCTTGTTGCATCTTTTGGGTTTCGATCATGAGATTAGCGAA
AAAGCTGAAGCAGAGATG
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