FC878131

Overview
NameFC878131
Unique NameFC878131
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length818
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y816_BACC2 (Putative metalloprotease BCG9842_B0816 OS=Bacillus cereus (strain G9842) GN=BCG9842_B0816 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.280e-16
Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  E+S+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEEEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4420_BACC4 (Putative metalloprotease BCB4264_A4420 OS=Bacillus cereus (strain B4264) GN=BCB4264_A4420 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  E+S+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y4300_BACCR (Putative metalloprotease BC_4300 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=BC_4300 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.977e-16
Identity = 46/106 (43.40%), Postives = 72/106 (67.92%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            +  E+S+ F +NE IR++N+++RD+D  TDV+S + + + E ++ I+      MLGD++IS+  A  QAEE GHS   E+  L +HG LHLLG+DH ++E+ E EM
Sbjct:   37 DGAEVSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDH-MTEEDEKEM 141          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y358_AGRT5 (Putative metalloprotease Atu0358 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu0358 PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.078e-16
Identity = 47/95 (49.47%), Postives = 63/95 (66.32%), Query Frame = 3
Query:  528 IELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELK-LPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAE 809
            +ELS++F ++E IR++N EWRD+D AT+VLS      E   +P  MLGDIVI+ ET  R+A E   S  D +  L+VHG LHL G+DH   E+AE
Sbjct:   49 VELSLVFTDDENIREINAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREALELDKSFEDHLTHLLVHGFLHLFGYDHMDEEEAE 143          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2895_METSB (Putative metalloprotease Msil_2895 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=Msil_2895 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.633e-16
Identity = 43/94 (45.74%), Postives = 59/94 (62.77%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEA 812
            E+SI+FC++ FI  LN++WR  D  T+VLS     P    P+L  GDIVI+ ET  R+A+E G    D +  L+ HG LHL+G+DH  +  AEA
Sbjct:   44 EISIVFCDDAFIADLNRKWRGVDKPTNVLSFPSGGPIAVTPVL--GDIVIAYETTEREAQEAGKPFRDHVAHLIAHGFLHLIGYDHLAAADAEA 135          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2482_DESRM (Putative metalloprotease Dred_2482 OS=Desulfotomaculum reducens (strain MI-1) GN=Dred_2482 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 47/105 (44.76%), Postives = 64/105 (60.95%), Query Frame = 3
Query:  498 AVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS----QHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISE 800
            ++E  G     E+ ++F ++ +IR LN E+R  D ATDVLS +    + +PE +    +LGDIVIS+ TA RQA E GHS   E+  L  HG LHLLG+DH   E
Sbjct:   29 SLESEGYSPDAEVGLIFVDDNYIRSLNAEYRGIDKATDVLSFALNEGEEMPEEEEAEDLLGDIVISLPTAQRQAAEYGHSFNREVAYLTAHGSLHLLGYDHMTEE 133          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2428_GEOTN (Putative metalloprotease GTNG_2428 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=GTNG_2428 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 49/109 (44.95%), Postives = 70/109 (64.22%), Query Frame = 3
Query:  498 AVEDVGGFESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMS-QHVPELKLPIL------MLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            AVE+V   E  E+S+ F +NE IR +N+++R +D  TDVLS + +   E ++ I+      +LGDI+IS+  A  QA E GHS + E+  L VHG LHLLG+DHE  E+
Sbjct:   31 AVENVP--EGAEVSVSFVDNERIRVMNRDYRGKDAPTDVLSFALEEEGEGEIDIIGADVPPVLGDIIISIPKAKEQAAEYGHSFMRELGFLAVHGFLHLLGYDHETEEE 137          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1963_PERMH (Putative metalloprotease PERMA_1963 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=PERMA_1963 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLSMSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            +++E+SI   ++  I+++N++WR +D  TDVLS        K    +LGD+VIS+  A +QAEE G    +EI  L++HG+LHLLG+DHE SEK
Sbjct:   34 DNVEISITLTDDSTIKEINRQWRGKDKPTDVLSFPIDEKPPKYRYRILGDVVISLPYAKKQAEEIGLPYREEIIRLLIHGILHLLGYDHERSEK 127          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y1564_SYNWW (Putative metalloprotease Swol_1564 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=Swol_1564 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.663e-16
Identity = 45/98 (45.92%), Postives = 67/98 (68.37%), Query Frame = 3
Query:  531 ELSILFCNNEFIRKLNKEWRDEDHATDVLS-----MSQHVPELKLP--ILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEK 803
            ELS++  +N +I++LN  +R E++ TDVLS     +S+   +L LP  + +LGDIV+S+E A  Q+EE GHS   E+  L+ HG+LHLLG+DHE  E+
Sbjct:   40 ELSVMIVDNSYIKELNLIYRGENNPTDVLSFAMNELSEEEMDLDLPGEVNVLGDIVVSLEKAVSQSEEYGHSAERELGYLIAHGMLHLLGYDHENEEE 137          
BLAST of FC878131 vs. ExPASy Swiss-Prot
Match: Y2444_SYNSC (Putative metalloprotease Syncc9605_2444 OS=Synechococcus sp. (strain CC9605) GN=Syncc9605_2444 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.131e-15
Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 3
Query:  522 ESIELSILFCNNEFIRKLNKEWRDEDHATDVLS---MSQHVPELKLPILMLGDIVISVETAARQAEERGHSLLDEIRILMVHGLLHLLGFDHEISEKAEAEM 818
            E + L + F ++  I  LN  WR +   TDVLS   +      ++ P + LGDIV+S+ETA RQA+E+GHSL  E+R L+ HGLLHLLG+DH   EK+ A M
Sbjct:   55 EELSLGLRFIDDATIADLNSTWRQKTGPTDVLSFAALDDAGDWMEGPSIELGDIVVSLETARRQAQEQGHSLQQELRWLVSHGLLHLLGWDHP-DEKSLATM 155          
The following BLAST results are available for this feature:
BLAST of FC878131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
Y816_BACC22.280e-1643.40Putative metalloprotease BCG9842_B0816 OS=Bacillus... [more]
Y4420_BACC42.977e-1643.40Putative metalloprotease BCB4264_A4420 OS=Bacillus... [more]
Y4300_BACCR2.977e-1643.40Putative metalloprotease BC_4300 OS=Bacillus cereu... [more]
Y358_AGRT55.078e-1649.47Putative metalloprotease Atu0358 OS=Agrobacterium ... [more]
Y2895_METSB6.633e-1645.74Putative metalloprotease Msil_2895 OS=Methylocella... [more]
Y2482_DESRM8.663e-1644.76Putative metalloprotease Dred_2482 OS=Desulfotomac... [more]
Y2428_GEOTN8.663e-1644.95Putative metalloprotease GTNG_2428 OS=Geobacillus ... [more]
Y1963_PERMH8.663e-1644.68Putative metalloprotease PERMA_1963 OS=Persephonel... [more]
Y1564_SYNWW8.663e-1645.92Putative metalloprotease Swol_1564 OS=Syntrophomon... [more]
Y2444_SYNSC1.131e-1547.06Putative metalloprotease Syncc9605_2444 OS=Synecho... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA88DH09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA88DH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878131 ID=FC878131; Name=FC878131; organism=Citrus clementina; type=EST; length=818bp
CAAAAGATTAAGCCTACATGCTCCCTCGCCTCTCCTCTGTACTCCGCGCT
CTCCCTTCCTCGACCGCTCCAATGGCGCGTATAATTTCACGAGCAACTCC
TCTACCTGTTACCCGTACCTCGTACGCCGCCATTTCCTTCCTCAACTCAC
CTTCGATCTCTTACAAAACGCACCGTTTGGATGCATCTTCTCCATCGAAT
TCGTCGCCGCTATTCGGTCGGGGATTCCGCGTGCTGTGTAGAAGAGAAGA
GGAGAGCGTGGTGCGATCGTCGCGAAAGGTTTTTGCTGAACAGAGAGGGT
ACCGCAAGGCGCGGAGACGAGTGGCGAAGAGCAAGCAGAAGGAATTGGAG
CTCAATGTCAGCATTTGCATCGAAGACGAGCTGCCTGATGATCCCGAAGT
ATTGAATATTGCAGAAATGCTTCGTCTTAATGCACCAACTTTAATGAAGT
TAGCATTTGATAGTTTGAAAGATTCGACATATAAAACAAGAGATACTGCC
GTAGAAGATGTTGGTGGGTTTGAAAGCATTGAGTTGTCTATACTCTTTTG
CAACAATGAGTTCATTCGTAAACTTAACAAAGAATGGAGGGATGAGGACC
ATGCCACTGATGTTCTCTCCATGTCACAACATGTCCCTGAACTCAAACTT
CCAATTCTTATGTTAGGTGACATTGTCATTTCTGTTGAGACTGCTGCAAG
ACAAGCAGAGGAAAGAGGGCACTCACTTCTTGATGAAATACGCATCCTTA
TGGTTCATGGCTTGTTGCATCTTTTGGGTTTCGATCATGAGATTAGCGAA
AAAGCTGAAGCAGAGATG
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