FC878133

Overview
NameFC878133
Unique NameFC878133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.574e-26
Identity = 79/236 (33.47%), Postives = 116/236 (49.15%), Query Frame = 3
Query:  183 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 872
            + L+KK + K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G D    C ++ +  AA    +  +   +E  +   + + GP++VAI+
Sbjct:   27 WELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQDEN--CMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 251          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATJ_RAT (Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.574e-26
Identity = 74/231 (32.03%), Postives = 116/231 (50.22%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +K K+ K+Y+  EE  +R  +++ NL+      K +    +G T     F+D T  EFR++   +     +   + Q  +  +  LP   DWR++G V PV++QG CGSCW+F+  GA+EG  F  TG L  LS Q L+DC            ++GC  G  + AF Y LK  GL  E  YPY G D    C++     +A++  F  +  +E  +   +   GP++ AI+
Sbjct:   32 WKTKYAKSYSPVEEELKR-AVWEENLKMIQLHNKENGLGKNGFTMEMNAFADTTGEEFRKSLSDILIPAAVTNPSAQKQV--SIGLPNFKDWRKEGYVTPVRNQGKCGSCWAFAAVGAIEGQMFSKTGNLTPLSVQNLLDC-------SKSEGNNGCRWGTAHQAFNYVLKNKGLEAEATYPYEGKD--GPCRYHSENASANITGFVNLPPNELYLWVAVASIGPVSAAID 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATK_MACMU (Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.974e-26
Identity = 79/237 (33.33%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  180 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 872
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +   +C ++ +  AA    +  +   +E  +   + + GP++VAI+
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATK_MACFA (Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 5.974e-26
Identity = 79/237 (33.33%), Postives = 117/237 (49.37%), Query Frame = 3
Query:  180 HFSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 872
            H+ L+KK   K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+      +  D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E D         GC GG M +AF+Y  K  G+  E+ YPY G +   +C ++ +  AA    +  +   +E  +   + + GP++VAI+
Sbjct:   25 HWELWKKTHRKQYNSKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTNEEVVQKMTGLKVPASHSRSNDTLYIPDWEGRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQE--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.331e-25
Identity = 76/237 (32.07%), Postives = 115/237 (48.52%), Query Frame = 3
Query:  192 FKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVT----QFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +K K+NK+Y+ +EE  +R  +++  L+      + +    +G T    +F D T  EFR+  + +        K  + ++A          LP   DWR+KG V PV+ QG C +CW+F+ TGA+E      TGKL  LS Q LVDC            ++GC GG   +AF+Y L  GGL  E  YPY G D    C+++     A +  F  +   ED + A +   GP+   I+
Sbjct:   32 WKIKYNKSYSLKEEKLKR-VVWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSI-------LPKFVDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDCSKP-------QGNNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKD--GPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGID 251          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 2.270e-25
Identity = 82/244 (33.61%), Postives = 121/244 (49.59%), Query Frame = 3
Query:  156 NDLLGAEHHFSLFKKKFNKAYASQEEHDRRFTIFKANLR--RAARRQKLDPSATHGVTQFSDLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 872
            +D +   + ++ +K K+N+ Y +Q +   R+ +F  NL   RA      + + T  + QF+D++  EF +TYL L+    +P+ A   A         A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   +   LSEQ LVDC    D       + GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F    +D     A  ++   +AVA++
Sbjct:   17 SDEIDTANLYANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSLK----VPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFK--DIDSCDELAQTIQERTVAVAVD 244          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.965e-25
Identity = 77/236 (32.63%), Postives = 117/236 (49.58%), Query Frame = 3
Query:  183 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATH----GVTQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 872
            + L+KK ++K Y S+ +   R  I++ NL+  +          H     +    D+T  E  +   GL+         D   I       P   D+R+KG V PVK+QG CGSCW+FS+ GALEG     TGKL++LS Q LVDC  E         + GC GG M +AF+Y  +  G+  E+ YPY G D   +C ++ +  AA    +  +   +E  +   + + GP++VAI+
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSHSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSE---------NYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD--ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAID 250          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 78/233 (33.48%), Postives = 110/233 (47.21%), Query Frame = 3
Query:  183 FSLFKKKFNKAYASQEEHDRRFTIFKANLRRAARRQKLDPSATHGVTQFSDLTPAEF-------------------------RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 803
            F  F  K+N+ +A+Q+E   R   F++N     + QK D     G+ +FSDLT  EF                          +TYL  L++ L   +D D A +   N      DWR   +V  VKDQ +CG CW+FST G++EG       K   LS Q+L+DCD         S  +GC GGL+ SA+EY  K  GL+  +D P+   D+   C   K+K   SV ++ V
Sbjct:  125 FEEFNSKYNRRHATQQERLNRLVTFRSNYLEV-KEQKGDEPYVKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPF--VDKARRCSVPKAK-KVSVPSYHV 338          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.872e-25
Identity = 72/182 (39.56%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  333 DLTPAEFRRTYLGLRRKLRLPKDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV-KNGPLAVAIN 872
            D+T  E  RT  GLR     P+      +   ++  PA  DWR KG V PVKDQG CGSCW+FS+ GALEG     TGKL+SLS Q LV C          S ++GC GG M +AFEY     G+  E+ YPY G D   +C +  +  AA    +  +  D ++     V + GP++V I+
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAAVDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQD--ESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGID 255          
BLAST of FC878133 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.057e-25
Identity = 57/145 (39.31%), Postives = 88/145 (60.69%), Query Frame = 3
Query:  435 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 869
            LP+  DWR KGAV  +K+Q  CGSCW+FS   A+E  N + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+Y +  GG+  +++YPY+      +CK  + ++  S+  F  V+ + +    + V + P++V +
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ--GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTV 133          
The following BLAST results are available for this feature:
BLAST of FC878133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
CATK_PIG4.574e-2633.47Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATJ_RAT4.574e-2632.03Cathepsin J OS=Rattus norvegicus GN=Ctsj PE=2 SV=2[more]
CATK_MACMU5.974e-2633.33Cathepsin K OS=Macaca mulatta GN=CTSK PE=1 SV=1[more]
CATK_MACFA5.974e-2633.33Cathepsin K OS=Macaca fascicularis GN=CTSK PE=2 SV... [more]
CATR_MOUSE1.331e-2532.07Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL1_PARTE2.270e-2533.61Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATK_RABIT2.965e-2532.63Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CYSP_THEPA3.872e-2533.48Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATK_CHICK3.872e-2539.56Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
ERVB_TABDI5.057e-2539.31Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA30BA09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA30BA09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878133 ID=FC878133; Name=FC878133; organism=Citrus clementina; type=EST; length=873bp
AAAACATGGGATCTAAAACAGTAGTTTTCTTTCTGGTCTCTCTCGTCGTC
GTCTCCGCCGTTTCATCAGGGACGTTGATCGACGATGTTGATCAGCTGAT
CAGGCAAGTAACGGACGGCGGTGACGAGATCCTAAGCCACCACGAGAGCA
CCAACAACGACCTCTTGGGCGCAGAGCACCACTTCTCCCTATTCAAGAAG
AAGTTCAATAAAGCGTACGCTTCGCAGGAGGAGCACGACCGTAGGTTCAC
TATTTTCAAGGCCAACTTGCGACGCGCCGCGCGTCGCCAGAAGCTCGACC
CGAGCGCCACCCACGGCGTCACTCAGTTCTCCGACTTGACTCCGGCCGAG
TTCCGCCGGACGTACCTTGGCCTCAGGAGGAAGCTGAGGCTGCCTAAGGA
TGCGGATCAGGCGCCGATCTTGCCTACGAATGATTTGCCGGCGGATTTTG
ATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTTAAAGATCAGGGTTCATGC
GGATCATGCTGGAGTTTCAGTACAACAGGGGCCTTGGAAGGTGCTAACTT
CCTGGCAACTGGAAAGCTTGTGAGCCTCAGTGAGCAACAGCTTGTGGATT
GCGATCATGAGTGTGATCCTGAGGAACCAGGTTCTTGTGATTCTGGATGC
AATGGTGGGCTTATGAACAGTGCTTTTGAGTACACACTCAAGGCTGGTGG
GCTTATGCGGGAGGAAGACTATCCTTACACCGGCACTGATCGTGGCCACG
CCTGCAAATTCGATAAGAGTAAGATTGCTGCCTCAGTGGCCAACTTCAGT
GTTGTCTCCCTTGATGAGGATCAAATTGCTGCCAATCTTGTGAAAAATGG
TCCCCTTGCAGTGGCCATCAATG
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