FC878143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP10_ORYSJ (Tubby-like F-box protein 10 OS=Oryza sativa subsp. japonica GN=TULP10 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.678e-36 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = 3 Query: 351 WASLPPELLCDVIKRLEESESS-WPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 W L PEL+ +V++R+E S WPARK +V+CA VCR WR +VR G++TFP SLKQPG +D IQCF+KR+K ++L+ Sbjct: 24 WGGLLPELVEEVVRRVEASGGERWPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKKSMFYLY 112 HSP 2 Score: 79.337 bits (194), Expect = 4.678e-36 Identity = 36/62 (58.06%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 638 VENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSA 823 ++ GKFL++A+R RR TEYVIS+DAD++S+ S+ Y+GKLRS+F GT F IYD QPP+ A Sbjct: 120 MDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWGTNFKIYDNQPPYDDA 181
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP2_ORYSJ (Tubby-like F-box protein 2 OS=Oryza sativa subsp. japonica GN=TULP2 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.181e-34 Identity = 45/88 (51.14%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 351 WASLPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 W++L P+LL D+++ +E WP R+ VVACA+VCR WR + +V+ P GK+TFP SLKQPG RD +QCFIKR+K N T+ L+ Sbjct: 51 WSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKITFPSSLKQPGPRDAPMQCFIKRNKKNSTFFLY 138 HSP 2 Score: 61.6178 bits (148), Expect = 4.181e-34 Identity = 29/63 (46.03%), Postives = 42/63 (66.67%), Query Frame = 2 Query: 635 LVENGKFLLSAKRTRRTTCTEYVISMDADNISRSSSTYIGKLRSNFLGTKFIIYDTQPPHTSA 823 L ++ KFLL+A+R RR EY I++++D + S + +G L+SNF GTKF I D QPP+ A Sbjct: 145 LTDDEKFLLAARRCRRGLHKEYAITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGA 207
BLAST of FC878143 vs. ExPASy Swiss-Prot
Match: TLP4_ARATH (Putative Tubby-like protein 4 OS=Arabidopsis thaliana GN=TULP4 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 9.099e-24 Identity = 46/85 (54.12%), Postives = 65/85 (76.47%), Query Frame = 3 Query: 360 LPPELLCDVIKRLEESESSWPARKHVVACAAVCRSWRAMCKEIVRSPEFCGKLTFPVSLKQPGARDGTIQCFIKRDKSNLTYHLF 614 +PPELL DV+ R+E SE +WP+RK+VV+C VC++WR + KEIV PE K TFP+SLKQPG +QC++KR++SN T++L+ Sbjct: 1 MPPELLRDVLMRIERSEDTWPSRKNVVSCVGVCKNWRQIFKEIVNVPEVSSKFTFPISLKQPGPGGSLVQCYVKRNRSNQTFYLY 85 The following BLAST results are available for this feature:
BLAST of FC878143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878143 ID=FC878143; Name=FC878143; organism=Citrus clementina; type=EST; length=848bpback to top |