FC878151

Overview
NameFC878151
Unique NameFC878151
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length822
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_DROSE (Eukaryotic translation initiation factor 3 subunit E OS=Drosophila sechellia GN=eIF3-S6 PE=3 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 2.196e-51
Identity = 108/260 (41.54%), Postives = 163/260 (62.69%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLY-QYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            MA +DLT+     LDRHL FPLLEFL  +++Y  +++L+  +E +NKTNM+DY MD  K L  ++++P+++V+R+ EV+A LK L+   API+     L+N  S +D +       +  L   Y    + +E+ Y  AK+ +E GNY  +  YLY     +  N +  L+ LWGK+AAEIL  NW+ ALE+L +L++ +D+     S +  +Q R WL+HWS+ +FFNH  GR LII++F  +  YLNAIQT  PH++RY
Sbjct:    1 MANFDLTRINCQFLDRHLTFPLLEFLCGKEIYNQQELLEYILETVNKTNMIDYTMDTRKRLNLSQEMPEELVQRKAEVLATLKQLQNEVAPIMKATDILKNGESMKDSKT-----FVNALQKDYNFKVEHLESAY-LAKYLYECGNYQESTSYLYFCLIVMSPNDKNYLNVLWGKLAAEILTLNWNTALEDLTRLRDYIDNAN--FSTIQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRY 252          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_AEDAE (Eukaryotic translation initiation factor 3 subunit E OS=Aedes aegypti GN=eIF3-S6 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.747e-51
Identity = 106/260 (40.77%), Postives = 164/260 (63.08%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSF---LQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            MA +DLT +    LDRHL FPLLEFL ++ +Y    +LK  ++ ++KTNMVDY MDI + L   +++P+++ +RR  V+ +LK L+   AP++     L+NP+S +D ++      +  L   +    D I++  + AK+ +E GNY  +  YLY    +   +++  L+ LWGK+AAEIL+ NW  ALE+L +L++ +D+     SP+  +Q R WL+HWS+ +FFNH  GR LII++F  +  YLNAIQT  PH+LRY
Sbjct:    1 MAKFDLTAKNCQYLDRHLTFPLLEFLLQKDIYDQTSLLKFILQTVSKTNMVDYTMDIRERLNMGDELPEELSKRRANVLVKLKELQTEVAPLMKCMEELKNPDSMKDSKS-----IVHALQQEFDFKHDIIKSAQKLAKYLYECGNYRDSISYLYICLLVMEPADKNYLTVLWGKLAAEILVLNWPTALEDLTRLRDFIDNHN--FSPIEVLQQRTWLIHWSVLVFFNHAKGRDLIIEMFLYKPLYLNAIQTMCPHILRY 253          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_YARLI (Eukaryotic translation initiation factor 3 subunit E OS=Yarrowia lipolytica GN=INT6 PE=3 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.346e-51
Identity = 102/253 (40.32%), Postives = 150/253 (59.29%), Query Frame = 2
Query:   65 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHD-NGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820
            YDLTQ+  P LDRHL++PLL+FL+ R +Y D ++L+ + +LL  TNM DY +++ K L   +    D+  ++  VV  L  LEE   P+   L+NP    +L+ N    N  +L  +Y +  +QI  LY++ +FQ+ +G Y  A+D LY +RAL T+ E   SA WG+ A EIL   WD  LEEL +L++ VD       P  Q+  R+W++HWSLF FF +D  G+  + DLF    Y++ IQ   P +LRY
Sbjct:    3 YDLTQKTLPFLDRHLIYPLLQFLKGRGVYNDTELLQLEYDLLKDTNMTDYLVELSKELGQND---ADLQAKKENVVKTLAELEEATKPVFEVLENPEVVSELKENKTQ-NQALLTSKYGLSVEQINLLYKFGQFQYNAGRYQAASDILYHFRALSTDPELVASATWGRFACEILTSQWDSVLEELGKLRDSVDSRS--LDPQQQLHQRMWVIHWSLFPFFQNDTKGKDALCDLFFSSSYISTIQAACPWILRY 249          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_NEUCR (Eukaryotic translation initiation factor 3 subunit E OS=Neurospora crassa GN=int-6 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.859e-50
Identity = 102/264 (38.64%), Postives = 162/264 (61.36%), Query Frame = 2
Query:   41 NLNATMATYDLTQRIAPNLDRHLVFPLLEF----LQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820
            N +   A YDL  ++AP+LDRH++FPLLEF    L+E +     +IL +K  LL KTNM DY  +++  L   ++ P +  ERR +V  +L+  E+  A I   LQ  +   +LR+ D+  NL+ L   + +  D + ALY + + Q+  GNY+ A++ LY++R L T++++   A WG++A EIL  NW+ A+EEL +++E + D +   +PL Q+Q R  L+HW+LF  FN+D  R  ++DLF    ++N IQ N+P +LRY
Sbjct:   10 NGDVAPANYDLVLKLAPHLDRHMIFPLLEFNAGRLKEDETDKAREILAAKYALLKKTNMTDYVANLYCELEGLKEPPAEYAERRQKVFHQLEKYEQETAKITELLQRDDVVNNLRS-DKVANLEFLKKEHDVTIDMVNALYDFGQLQYSCGNYADASELLYRFRVLSTDNDKVSYATWGRLACEILTMNWESAMEELQKVRESI-DTRLANNPLAQLQHRTELVHWALFPLFNYDKAREPLLDLFFNAGFINTIQANSPWILRY 271          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_PHANO (Eukaryotic translation initiation factor 3 subunit E OS=Phaeosphaeria nodorum GN=INT6 PE=3 SV=3)

HSP 1 Score: 198.749 bits (504), Expect = 3.172e-50
Identity = 100/252 (39.68%), Postives = 149/252 (59.13%), Query Frame = 2
Query:   65 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820
            Y L  ++ PNLDRHL++PLL F  +          K  +ELL  TNM D+   +++ +++ +D+P +   +R +V+ R   LEE  + I   L + N   +LR+ D+  NL  L D + +  + +  LY++  FQ+  G Y  AA+ LY++R L  N + R  A WGK+A E L  NWD A+EE+N+LKE +D  + F +PL Q+Q R WL+HWSLF  FNH+  R  + D+F    Y+N IQTN P +LRY
Sbjct:   15 YSLLPKLMPNLDRHLIYPLLNFSADEDAEQPLDQKKLLLELLKPTNMTDFVGQLYQDVHNLDDMPDEYKTKRDQVLQRRDKLEEETSKISGLLDDENVVTNLRS-DKVQNLAYLKDTHGVTVEMVNQLYEFGSFQYSCGVYPHAAELLYRFRVLVRNIQER-EATWGKLACEFLSVNWDSAIEEINKLKETIDT-RLFNNPLAQLQHRTWLIHWSLFPLFNHEPARESLTDMFFSPSYINTIQTNCPWILRY 263          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_CULQU (Eukaryotic translation initiation factor 3 subunit E OS=Culex quinquefasciatus GN=eIF3-S6 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.172e-50
Identity = 105/260 (40.38%), Postives = 161/260 (61.92%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSF---LQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            M+ +DLT +    LDRHL FPLLEFL ++ +Y    +LK  +E ++KTNMVDY MDI + L    ++P+++ +RR  V+ +LK L+   AP++     L+NP++ +D ++      +  L   +    D I +  + AK+ +E GNY  +  YLY    +   +++  L+ LWGK+AAEIL  NW  ALE+L +L++ +D+     SP+  +Q R WL+HWS+ +FFNH  GR LII++F  +  YLNAIQT  PH+LRY
Sbjct:    1 MSKFDLTAKNCQYLDRHLTFPLLEFLLQKNIYDQTSLLKFILETVSKTNMVDYTMDIRERLNMGNELPEELTKRRSNVLVKLKELQTEVAPLMKCMEELKNPDTMKDSKS-----IVHALQQEFDFKYDIIRSAQKLAKYLYECGNYRDSISYLYICLLVMEPTDKNYLNVLWGKLAAEILTLNWPTALEDLTRLRDFIDNHN--FSPIEVLQQRTWLIHWSVLVFFNHAKGRDLIIEMFLYKQLYLNAIQTMCPHILRY 253          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EI3E1_DROWI (Eukaryotic translation initiation factor 3 subunit E-1 OS=Drosophila willistoni GN=eIF3-S6-1 PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.574e-49
Identity = 107/264 (40.53%), Postives = 165/264 (62.50%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIV---SFLQNPNSFQD----LRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            MA +DL       LDRHL FPLLEFL  +++Y  +++L+  +E + KTNM+DY MD  K L  ++++P+++V+++ +V+A LK L+   API+     L++  + +D    + A  + YN +M H         + + Y+ AK+ +E GNY  +  YLY    +   S++  L  LWGK+AAEIL  NW+ ALE+L +L++ +D+  SF S L  +Q R WL+HWS+ +FFNH  GR LII++F  +  YLNAIQT  PH++RY
Sbjct:    1 MAQFDLVHINCQYLDRHLTFPLLEFLCGKEIYNQQELLEYILETVKKTNMIDYTMDTRKRLNLSQEMPEELVQQKADVLATLKQLQNEVAPIMKATDILKDGETMKDSKTFVSALQRDYNFKMEH---------LYSAYKLAKYLYECGNYQESTSYLYFCLIVMAPSDKNYLDVLWGKLAAEILTLNWNTALEDLTRLRDYIDN-ASF-STLQALQQRTWLIHWSVLVFFNHPKGRDLIIEMFLYKPLYLNAIQTMCPHIMRY 253          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_USTMA (Eukaryotic translation initiation factor 3 subunit E OS=Ustilago maydis GN=INT6 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.128e-47
Identity = 100/271 (36.90%), Postives = 151/271 (55.72%), Query Frame = 2
Query:   65 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDD-----PKSFTSPLNQ--------------MQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820
            YDLTQ + P LDRHL  PLL  L    ++ +  I K++ EL   T+MVDYA+ +++  Y  +  P ++ ++R   +A    L      ++  +Q+P+    L+  D+  NLQ L ++Y +  +QI ALY+Y  FQF  GNY  A+ YLY +R L T+    +S+ WGK+A++IL+  W+ AL EL  L+E++D        S+  P                 ++ R WL+HW+LFIFFNH  GR  ++++F    YLN IQT    LLRY
Sbjct:    5 YDLTQTLLPYLDRHLGLPLLSHLAGSGIFSETDIAKAQYELAKNTSMVDYALQLYEQAYPNQPAPAEIEKQRENAIALNDKLGSEVDHVLEVIQDPSVASALK-QDKAQNLQWLEEKYNLTSEQINALYRYGYFQFSCGNYGDASSYLYHFRVLSTDPVLTMSSHWGKLASDILVGEWEQALSELKLLREQLDSSAAHVTASYAQPSTSNGSSQNDDLTQEGLLKKRAWLLHWALFIFFNHPGGREQLVEMFLSPVYLNTIQTTCWWLLRY 274          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_BRUMA (Eukaryotic translation initiation factor 3 subunit E OS=Brugia malayi GN=Bm1_11985 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.473e-47
Identity = 100/259 (38.61%), Postives = 163/259 (62.93%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNP--NSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALC-TNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            MA YDLT+R+AP  D HLV PLLEF++ R +Y  + ++K    +L KTNM+D  ++     Y   +VP+++ +R+VE++++ + L+ +  P+V  L++    +  D R    +  L+ +   + +  + +++L++YAKFQ+E GNYS A+  L  YR +    +   LSAL+GK+A+EIL+Q W  A ++L +L+  +D    F + L  +Q R WLMHW+LF++FN+  GR  I++++ NQ  YLN IQ   PHLLRY
Sbjct:    1 MAEYDLTKRMAPFFDLHLVIPLLEFIEPRSIYDHDSLIKVHRRVLLKTNMIDSVIE----TYPEGEVPKELEQRKVEILSQREKLKVKVDPVVEILESEPVKAMMDSRELTNNRILEYVTANHGLTEEMLDSLFRYAKFQYECGNYSAASLCLDYYRNIVPQQNPNYLSALYGKLASEILLQEWTHAKDDLTKLRTYIDF-NPFDTELESVQQRAWLMHWALFVYFNYPKGRDEIVEMYLNQQPYLNTIQIACPHLLRY 254          
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_ANOGA (Eukaryotic translation initiation factor 3 subunit E OS=Anopheles gambiae GN=eIF3-S6 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.473e-47
Identity = 106/261 (40.61%), Postives = 159/261 (60.92%), Query Frame = 2
Query:   56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSF---LQNPNSFQDLRANDQHYNLQMLHDRYQ-IGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALC-TNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820
            MA +DLT +    LDRHL FPLLEFL +++++    +LK  +E ++KTNMVDY  DI + L   +  P ++ + R  V+A LK L+   AP++     L+NP+S +D ++        ++H   Q +  D I +  + AK+ +E GNY+ +  YLY    +   N +  L  LWGK+A EIL  NW  ALE+L +L++ +++     SP+  +Q R WL+HWS+ +FFNH  GR LIID+F  + +YLNAIQT  PH+LRY
Sbjct:    1 MAKFDLTAKNCQYLDRHLTFPLLEFLLQKKVFDQTSLLKFILETVSKTNMVDYKHDIRERLAMDKVHPDELAQGRANVLATLKELQAEVAPLMKCMEELKNPDSTKDSKS--------VIHALQQTLDYDIILSAQKLAKYLYECGNYNDSLSYLYVCMLVMEPNDKNYLGVLWGKLAVEILTLNWQTALEDLTRLRDFIENYN--FSPIQVLQQRAWLIHWSVLVFFNHGKGRDLIIDMFLYKPQYLNAIQTMCPHILRY 251          
The following BLAST results are available for this feature:
BLAST of FC878151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
EIF3E_DROSE2.196e-5141.54Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_AEDAE3.747e-5140.77Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_YARLI8.346e-5140.32Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_NEUCR1.859e-5038.64Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_PHANO3.172e-5039.68Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_CULQU3.172e-5040.38Eukaryotic translation initiation factor 3 subunit... [more]
EI3E1_DROWI1.574e-4940.53Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_USTMA1.128e-4736.90Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_BRUMA1.473e-4738.61Eukaryotic translation initiation factor 3 subunit... [more]
EIF3E_ANOGA1.473e-4740.61Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA30BA11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA30BA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878151 ID=FC878151; Name=FC878151; organism=Citrus clementina; type=EST; length=822bp
CAGAACAGTAGCAGCAGACGCCGCTGCCGCCGACGAACAAAATTTGAACG
CGACAATGGCGACGTACGATTTGACGCAGAGAATCGCTCCGAATCTGGAC
CGGCATCTGGTGTTTCCGCTGCTGGAGTTTCTTCAAGAGCGGCAGATGTA
CCCGGACGAGCAGATTTTGAAATCGAAGATAGAGCTCTTGAACAAGACGA
ACATGGTCGACTACGCGATGGACATCCACAAGAGCCTCTACCACACCGAA
GACGTCCCGCAGGATATGGTCGAGCGGAGGGTCGAGGTCGTCGCTCGGTT
GAAGGCCCTGGAGGAGCGCGCCGCCCCGATCGTTTCGTTCTTGCAGAACC
CTAACTCCTTTCAAGATTTGAGAGCTAATGACCAGCACTACAATTTGCAG
ATGCTTCACGACCGTTACCAGATTGGCCCGGACCAGATCGAGGCGCTTTA
TCAGTATGCCAAATTTCAGTTTGAATCTGGGAACTACTCTGGGGCTGCTG
ACTATCTGTACCAGTACAGGGCCTTGTGCACAAACAGTGAAAGGAGGCTG
AGTGCATTATGGGGAAAAATGGCGGCTGAGATATTGATGCAGAATTGGGA
TATTGCTCTTGAAGAACTTAATCAATTAAAGGAAAAAGTTGATGACCCAA
AGAGTTTCACATCACCTTTAAATCAGATGCAAAGTAGGATATGGTTAATG
CATTGGAGTCTCTTCATCTTTTTCAATCATGATAATGGAAGAACACTGAT
CATTGACTTGTTCAATCAGGATAAGTATCTAAATGCCATTCAAACCAATG
CTCCCCATCTTTTACGCTATTT
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