FC878151
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_CHAGB (Eukaryotic translation initiation factor 3 subunit E OS=Chaetomium globosum GN=INT6 PE=3 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.247e-46 Identity = 98/270 (36.30%), Postives = 162/270 (60.00%), Query Frame = 2 Query: 41 NLNATMATYDLTQRIAPNLDRHLVFPLLEFL------QERQMYPDE----QILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820 N +A ++ YDL ++A NLDRH++FPLLEF +E + DE +I ++K LL +NM DY +++ L E+ P + +++ +V ++L+ LE++ + I+ L+ + +LR+ D+ NL+ L +Q+ D + AL+ Q+ GNY A++ LY++R L T++++ A WG++A EIL NW+ A+EEL +++E + D K +PL Q+Q R L HW+LF FN + R I++LF Y+N IQ N P +LRY Sbjct: 8 NGDAAVSDYDLMLKLAQNLDRHMIFPLLEFSAGQLVDEESGVVRDEAKAREITQAKYSLLKNSNMTDYVANLYCELAGVEEPPAEFADKKQKVFSQLQNLEQQTSKIIELLEREDVVNNLRS-DKVANLEFLKREHQVTMDMVNALFDLGNLQYSCGNYGDASEMLYRFRVLSTDNDKVAFATWGRLACEILTMNWESAMEELVKVRETI-DTKLSQNPLAQLQHRTALTHWALFPLFNFEKAREPILELFFNAGYINTIQANCPWILRY 275
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEEL (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis elegans GN=eif-3.E PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.012e-45 Identity = 96/262 (36.64%), Postives = 163/262 (62.21%), Query Frame = 2 Query: 56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYN-----LQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSE-RRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820 M+T+DLTQR+AP LD HL+ PLLEF++ R +Y ++ + + +LL KTNM+D ++ Y+ + +P + ++ +++ L+ + +V+ L+ P +++ N++ + L+ L + D ++ L++Y+KF +E GNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ + D F + + R WLMHW+LF+++N+ GR II++F NQ YLNAIQ APHLLRY Sbjct: 1 MSTFDLTQRMAPFLDLHLIIPLLEFIEPRGIYDEKSLTEMHRQLLTKTNMIDSVIE----TYNGKPIPAAIEAKKKQIIKERDELKSKVDSVVAILEIP-EVKEMMDNNRERDGNVRILEHLTQNHNFTVDMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYI-DANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLAPHLLRY 256
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_MONBE (Eukaryotic translation initiation factor 3 subunit E OS=Monosiga brevicollis GN=13685 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.691e-41 Identity = 91/256 (35.55%), Postives = 146/256 (57.03%), Query Frame = 2 Query: 56 MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDRYQIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820 MA +DLTQ I NLD HL+ PLL+ + +Y + + ++K+++L++T +++ A+++ + TE +D+ R + K E++ P+ +N + A +L + Y + + LY +KF F+ G Y A LY YRA+ T+ + + +ALWGK+AA IL NW A E++ L E +D K+ + + Q+Q R WL+HWSLF+FFN +G I+DLF N++ NA+QT APHL RY Sbjct: 1 MAAHDLTQAICQNLDPHLILPLLDHCVDLDIYNEADLKRAKMQVLSRTRLIEQALELADA---TEK--KDLDARMRSISEEEKTWEKQLEPVFEMFENDEVLSIIEATKNKDSLLSELEPYGFTENTADLLYHGSKFYFDRGQYDLAHGLLYNYRAVSTDDKLKFTALWGKLAAAILSGNWQTAQEDMYLLLEYIDGGKNELTAVEQLQQRNWLLHWSLFVFFNQPDGPDGIVDLFMNKETCTNAMQTIAPHLFRY 251
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_DICDI (Eukaryotic translation initiation factor 3 subunit E OS=Dictyostelium discoideum GN=eif3e PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.697e-33 Identity = 83/299 (27.76%), Postives = 158/299 (52.84%), Query Frame = 2 Query: 65 YDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKSLYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFL----QNPNSFQDLRANDQHYNLQMLHDRY----------------------------------------QIGPDQIEALYQYAKFQFESGNYSGAADYLYQYRALCT---NSERRLSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDKYLNAIQTNAPHLLRY 820 YDLT++I LD H++ PL+ +L++ Q Y + +I K+ ++L++T DYA++ ++S+ + P + ++ E+V L L+E+ + + ++ Q ++L+ + + D+ +I P+ ++++Y+++K FE G Y A ++L + L N ++RLSALWG + ++IL NW A+ +++ L++++D S +P+ Q+ R WL+H +LF++F + R+ ++DL +DKYLNAIQT PH+LRY Sbjct: 3 YDLTKQICSFLDAHMMLPLINYLKDTQQYQENEINKAMADILSQTGCCDYAINAYESIGR-DTAP--LQAKKQELVGELNKLKEQCSFVTQYIESKKQQKEQQKELKEQQKEQQKEKDTDKTTPTTTDETTTTTTTAPTTTTTTTTTTITPITVIPFSQLLEKITPEILDSIYRFSKLLFEIGQYGSAREHLEIFLQLSPTHQNKDKRLSALWGILESDILSLNWGQAVGDISPLQDQID---SNGTPVEQLGQRAWLIHRALFVYFYNPESRSSLVDLLLEDKYLNAIQTTCPHILRY 295
BLAST of FC878151 vs. ExPASy Swiss-Prot
Match: EIF3E_CAEBR (Eukaryotic translation initiation factor 3 subunit E OS=Caenorhabditis briggsae GN=eif-3.E PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 6.435e-27 Identity = 60/132 (45.45%), Postives = 90/132 (68.18%), Query Frame = 2 Query: 431 DQIEALYQYAKFQFESGNYSGAADYLYQYRALCTNSERR-LSALWGKMAAEILMQNWDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLF-NQDKYLNAIQTNAPHLLRY 820 D ++ L++Y+KF +E GNY+ A+ LY YR L ++ L+AL+GK+A+EIL+Q W+ A ++L +L+ +D F + + R WLMHW+LF+++N+ GR II++F NQ YLNAIQ APHLLRY Sbjct: 5 DMVDTLFKYSKFMYECGNYTVASVCLYYYRNLVNQADPNYLNALYGKLASEILLQEWEHARDDLLKLRAYID-ANPFDTEWELVTQRAWLMHWALFVYYNYPKGRDEIIEMFLNQQPYLNAIQVLAPHLLRY 135 The following BLAST results are available for this feature:
BLAST of FC878151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878151 ID=FC878151; Name=FC878151; organism=Citrus clementina; type=EST; length=822bpback to top |