FC878156
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_SULAC (Tryptophanyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=trpS PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.565e-45 Identity = 95/199 (47.74%), Postives = 134/199 (67.34%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQAV 807 V+PWEV GK+DYDKLI +FG Q++ L +R +R HV LRR VFF+HRD + IL+ YEKG F+LYTGR PS +H+GHL+PF+FTK+LQ+ FKV + I++TDDEK + + ++++++ + EN DIIA GFD KTFIF D +Y+ Y VK+AK +T+N+V FG +IG + +P +Q V Sbjct: 7 VTPWEVK--GKVDYDKLIVQFGTQKMTSELKERAKRAINDELHVMLRRDVFFSHRDFDLILNDYEKGNGFFLYTGRAPSL-GMHIGHLIPFIFTKWLQEKFKVNVYIEITDDEKFLRNVDYTLDQTKEWSYENILDIIAVGFDPNKTFIFQDTEYIKN-MYPLSVKIAKKLTFNEVRATFGLDTSSNIGIIFYPALQIV 201
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_PYRFU (Tryptophanyl-tRNA synthetase OS=Pyrococcus furiosus GN=trpS PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.662e-44 Identity = 92/198 (46.46%), Postives = 132/198 (66.67%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQA 804 V+PWEV G IDY+KLI++FG L L++R RLT +F RR FF+HRD + +LD YE+G+ F+LYTGRGPS +H+GH++PF TK+LQ+ F V L IQ+TDDEK ++K NL+ E+++ A +N DIIA GFD KTFIF + ++ Y+ + +AK + ++ +FGFT + IG + FP +QA Sbjct: 7 VTPWEVE--GIIDYNKLIEQFGTSPLTDDLLERTARLTKSELPIFFRRKFFFSHRDYDKVLDDYEQGKGFFLYTGRGPSG-PMHIGHIIPFFATKWLQEKFDVNLYIQITDDEKFLFKENLTFEDTKYWAYQNILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQA 199
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_SULSO (Tryptophanyl-tRNA synthetase OS=Sulfolobus solfataricus GN=trpS PE=3 SV=2) HSP 1 Score: 176.407 bits (446), Expect = 1.838e-43 Identity = 92/197 (46.70%), Postives = 133/197 (67.51%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 V+PWEV GK+DYDKLI +FG Q++ + L R++ L G HV LRR VFF+HRDL+ +L+ YEK + F+LYTGR PS +H+GHL+PF+FTK+LQ+ F L I++TDDEK M ++++++ A +N DIIA GF+ KTFIF D +Y+ Y VK+AK +T+++V FG +IG + +P +Q Sbjct: 7 VTPWEVK--GKVDYDKLIVQFGTQKITEELKQRIKNLAG-DLHVMLRRNVFFSHRDLDLVLNDYEKSKGFFLYTGRAPSL-GMHIGHLIPFIFTKWLQEKFNANLYIEITDDEKYMRNPEFTLDQTRSWAYDNILDIIAVGFNPDKTFIFQDTEYIRN-MYPITVKIAKKLTFSEVRATFGLDASSNIGLIFYPALQ 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_SULTO (Tryptophanyl-tRNA synthetase OS=Sulfolobus tokodaii GN=trpS PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 6.984e-43 Identity = 89/197 (45.18%), Postives = 133/197 (67.51%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 V+PWEV GK+DYDKLI +FG Q++ L ++++ + HV LRR VFF+HRDL+ +L Y+ G+ F+LYTGR PS +H+GHL+PF+FTK+LQD F V L I++TDDEK M +++++++ A +N DIIA GF+ KTFIF D +Y+ Y +K+AK +T+++V FG +IG + +P +Q Sbjct: 7 VTPWEVK--GKVDYDKLIVQFGTQKITSELKEKIKSIINDELHVMLRRDVFFSHRDLDLVLKDYQDGKGFFLYTGRAPSL-GMHIGHLIPFIFTKWLQDKFNVNLYIEITDDEKFMRNPEYTLDQTRQWAYDNILDIIAVGFNPDKTFIFQDTEYIRN-MYPIAIKIAKKLTFSEVRATFGLDTSSNIGIIWYPALQ 199
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_PYRHO (Tryptophanyl-tRNA synthetase OS=Pyrococcus horikoshii GN=trpS PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.556e-42 Identity = 89/197 (45.18%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 V+PWEV G +DYDKLI FG L + L+++ LT +F RR FF+HRD + IL YE+G F+LYTGRGPS +H+GH++PF TK+LQ+ F V L IQ+TDDEK ++K NL+ ++++R A +N DIIA GFD KTFIF + ++ Y+ + +AK + ++ +FGFT + IG + FP +Q Sbjct: 7 VTPWEVE--GVVDYDKLIKHFGTSPLTEDLLEKTAELTKSELPIFFRRKFFFSHRDYDLILKDYEEGRGFFLYTGRGPSG-PMHIGHIIPFFATKWLQEKFGVNLYIQITDDEKFLFKENLTFDDTKRWAYDNILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQ 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_PYRAB (Tryptophanyl-tRNA synthetase OS=Pyrococcus abyssi GN=trpS PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.556e-42 Identity = 88/197 (44.67%), Postives = 128/197 (64.97%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 V+PWEV G +DY+KLI+ FG L + L+++ LT +F RR FF+HRD + +L YE+G F+LYTGRGPS +H+GH++PF TK+LQ+ F V L IQ+TDDEK ++K NL+ E+++ A EN DIIA GFD KTFIF + ++ Y+ + +AK + ++ +FGFT + IG + FP +Q Sbjct: 7 VTPWEVE--GVVDYNKLIEHFGTSPLTEELLEKTAELTKSELPLFFRRKFFFSHRDYDKVLQDYEEGRGFFLYTGRGPSG-PMHIGHIIPFFATKWLQEKFGVNLYIQITDDEKFLFKENLTFEDTKHWAYENILDIIAVGFDPDKTFIFQNSEFT--KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFFPAIQ 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_THESM (Tryptophanyl-tRNA synthetase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=trpS PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.032e-42 Identity = 89/198 (44.95%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQA 804 V+PWEV+ G +DY+KLI++FG L L+ + + LT + ++ +R FF+HRD + +L YE G+ F+LYTGRGPS +H+GH++PF TK+LQ+ F V L +Q+TDDEK ++K L+ E ++R A EN DIIA GFD KTFIF D ++ Y+ + +AK VTY+ +FGF + IG + FP +QA Sbjct: 6 VTPWEVT--GVVDYNKLIEEFGTTPLTDDLLKKTEELTKKELPMYFKRKFFFSHRDYDLVLKDYEAGKGFFLYTGRGPSG-PMHIGHIIPFFATKWLQENFGVNLYVQITDDEKFLFKPQLTFEGTKRWAYENILDIIAVGFDPDKTFIFQDSEFT--KIYEMAIPIAKKVTYSMAKAVFGFNEQSKIGMIFFPAIQA 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_PYRKO (Tryptophanyl-tRNA synthetase OS=Pyrococcus kodakaraensis GN=trpS PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.720e-41 Identity = 87/198 (43.94%), Postives = 127/198 (64.14%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWK-NLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQA 804 V+PW+V G +DY+KLI++FG L L+++ LT +F RR FF+HRD + +L YE G F+LYTGRGPS +H+GH++PF TK+LQ+ F V L IQ+TDDEK ++K LS E+++R A EN DIIA GFD KTFIF + ++ Y+ + +AK + ++ +FGF + IG + +P +QA Sbjct: 6 VTPWDVE--GVVDYNKLIEQFGTSPLTDELIEKTAELTKSELPLFFRRRFFFSHRDYDKVLADYESGRGFFLYTGRGPSG-PMHIGHIIPFFATKWLQENFDVNLYIQITDDEKFLFKEKLSFEDTKRWAYENILDIIAVGFDPDKTFIFQNSEFT--KIYEMALPIAKKINFSMARAVFGFNEQSKIGMIFYPAIQA 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_THEON (Tryptophanyl-tRNA synthetase OS=Thermococcus onnurineus (strain NA1) GN=trpS PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.832e-41 Identity = 84/198 (42.42%), Postives = 130/198 (65.66%), Query Frame = 1 Query: 214 VSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCMWKN-LSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQA 804 V+PW+V G +DY+KLI++FG L L+++ +LT ++ RR FF+HRD + +L YE G+ F+LYTGRGPS +H+GH++PF TK+LQ+ F V L IQ+TDDEK ++K+ L+ E+++ A +N DIIA GFD +TFIF D ++ Y+ + +AK + ++ +FGFT + IG + +P +QA Sbjct: 6 VTPWDVE--GLVDYNKLIEEFGTSPLTDELLEKTAQLTKSELPLYFRRRFFFSHRDYDKVLQDYESGKGFFLYTGRGPSG-PMHIGHIIPFFATKWLQEKFGVNLYIQITDDEKFLFKDKLTFEDTKYWAYQNILDIIAVGFDPDRTFIFQDSEFT--KIYEMAIPIAKKINFSMAKAVFGFTEQSKIGMIFYPAIQA 198
BLAST of FC878156 vs. ExPASy Swiss-Prot
Match: SYW_PYRCJ (Tryptophanyl-tRNA synthetase OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=trpS PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 3.474e-34 Identity = 83/198 (41.92%), Postives = 121/198 (61.11%), Query Frame = 1 Query: 211 VVSPWEVSSSGKIDYDKLIDKFGCQRLDQSLVDRVQRLTGRPPHVFLRRGVFFAHRDLNDILDAYEKGEKFYLYTGRGPSSEALHLGHLVPFMFTKYLQDAFKVPLVIQLTDDEKCM-WKNLSVEESQRLARENAKDIIACGFDVTKTFIFSDFDYVGGAFYKNMVKVAKCVTYNKVVGIFGFTGEDHIGKVSFPPVQ 801 VV+PWEV G++DY KL+ +FG + L Q+ V +++ G H +RRG F+AHRDL+ IL + +G+ + LYTGRGPS +H+GH+VP++ K+L D F V + Q+TDDEK + +EE+ + A ENA D+IA GF K + D + Y KVAK +T+N V FGFT +IG + +P +Q Sbjct: 6 VVTPWEVR--GRVDYQKLMQQFGARPLTQAEVSLLEKYAGEV-HPLIRRGFFYAHRDLDAILKWHGEGKPWALYTGRGPSG-PVHIGHMVPWILLKWLSDKFGVEVYFQMTDDEKFYDDPEMRLEEATKWAYENALDVIALGFTPDKLHLIIDTKDI-KPLYPIAAKVAKKLTWNTVKATFGFTDSTNIGLIFYPSLQ 198 The following BLAST results are available for this feature:
BLAST of FC878156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878156 ID=FC878156; Name=FC878156; organism=Citrus clementina; type=EST; length=868bpback to top |