FC878164
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_BACV8 (Threonyl-tRNA synthetase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=thrS PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.287e-41 Identity = 88/235 (37.45%), Postives = 140/235 (59.57%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKIT PDGSV+E T + IA+ IS LA + L VNG D++RP+ D + L+ ++ ++G+ FWH+SAH+L +A+++ Y G + IGP G FYYD G+ + +I+++ + A +K+ R + ++ AL+ F + +K E+I++L D IT Y G DLCRGPH+ +T+ +K L + AYWRG +DR+ + R+YGI++P KK + EY+ Sbjct: 2 IKITFPDGSVREYNEGVTG-LQIAESISSRLAQDVLACGVNGETIDLSRPINEDANFVLYKWEDEQGKHAFWHTSAHLLAEALQELYPGIQFGIGPAIENG--FYYDVDPGEAIIKEADLPAIEAKMAELAAKKEILVRQSIAKEDALKKFGERGETYKCELISELE-DGHITTYTQGAFTDLCRGPHLTSTAPIKAIKLLTVAGAYWRGQEDRKQMTRIYGITFPKKKMLDEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STRSV (Threonyl-tRNA synthetase OS=Streptococcus sanguinis (strain SK36) GN=thrS PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.069e-40 Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKT-ITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKIT PDG+V+E + T+ +IAQ IS SLA AL NG L D TR + D +++ T D ++ D HS+AH+ QA + + L +GP +GFYYD ++ + I+ E K KE P R EVT+D+A E+F ++ +K+E+I + D+ +T+YR VDLCRGPH+P+T ++ F L + AYWRGN D +QRVYG ++ DKK +K+Y++ Sbjct: 2 IKITFPDGAVREFESGVTT-FEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGAIEIVTPDHEDALDILRHSAAHLFAQAARRLFPDIHLGVGPAIQ--DGFYYDTDNEAGQISNEDLPRIEEEMKKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQSEYVDLCRGPHVPSTGRIQIFHLLNVAGAYWRGNSDNAMMQRVYGTAWFDKKDLKKYLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_PSYA2 (Threonyl-tRNA synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=thrS PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.069e-40 Identity = 90/236 (38.14%), Postives = 137/236 (58.05%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDN--NFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 + ITLPDGSVK + T+ M++AQ I LA + V+G L D P+ AD +++ T D+G D HS AH+LG A++Q Y K+ IGP +GFYYD Y + P+H +I+ + K+ + R + +++F + ++K+++IND+P ++ +Y VD+CRGPH+PNT F+K F K S AYWRG+ E LQR+YG ++ DKK +K YI+ Sbjct: 2 VAITLPDGSVKNFEG-NTTVMEVAQSIGTGLAKATVAGRVDGHLVDAHDPIVADAKVEIVTPRDDDGVDIIRHSCAHLLGHAVKQLYPDVKMVIGPVID--DGFYYD-IYSETPFTPEHMAAIEKRMMELIKQDYDVIKKITPRAEVIKIFEERGEDYKLKLINDMPGEEAFGLYHHQEYVDMCRGPHVPNTRFLKVFKLTKMSGAYWRGDAKNEQLQRIYGTAWADKKDLKTYIQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_ALHEH (Threonyl-tRNA synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=thrS PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.069e-40 Identity = 92/233 (39.48%), Postives = 136/233 (58.37%), Query Frame = 3 Query: 228 ITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 ITLPDGS +E + D+A+ I K LA AL V+G L D++ ++ D L++ T +G D HS+AH++ QA+++ + ++ IGP G FYYD Y D K+I+ + ++ A++ R RD+A+ F + +K EII DLP +TI+VY+ G +DLCRGPH+PNT +K F K + AYWRG D E LQR+YG ++PDKK +K Y+ Sbjct: 4 ITLPDGSRREFDH-PVTVRDVAESIGKGLARAALAGRVDGRLVDLSHRIDDDVQLEIVTDRDPDGVDMIRHSTAHLMAQAVKELFPEAQVTIGPVIENG--FYYDFAY-KRPFTEDDLKAIEKKMEELARQDFEVHREVWDRDEAIRFFLEQGEQYKAEIIEDLPEHETISVYKQGDFLDLCRGPHVPNTGKLKAFKLQKVAGAYWRGKSDNEMLQRIYGTAWPDKKQLKAYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_SYMTH (Threonyl-tRNA synthetase OS=Symbiobacterium thermophilum GN=thrS PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.702e-40 Identity = 91/235 (38.72%), Postives = 140/235 (59.57%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDN--NFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 + +TLPDGSV+E + T +AQ I LA AL + V+G L D++ LE DC L++ TF +EGR+ F H+S HI+ QA+++ + KL +GP FYYD F L P+ + I++E K + P R EV R++A F++ ++KV +++ +P D+ +++Y G DLC GPH+P+T VK F L + AYW GN+ + LQRVYG S+ KK +++Y+ Sbjct: 5 VHVTLPDGSVREYPQGITIAEAVAQ-IGPRLAKAALAAKVDGRLVDLSARLEKDCTLQVLTFKDEEGREVFRHTSTHIMAQAVKRLFPEAKLTVGPPLENS--FYYD-FDLPRPLTPEDLEKIEAEMAKIVEADYPIVRQEVDREEAKRFFAERGEDYKVLLVDKIPEDEVVSIYTQGEFTDLCVGPHLPSTGRVKAFKLLSVAGAYWEGNQANKQLQRVYGTSFESKKDLEDYL 235
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT2_BACSU (Threonyl-tRNA synthetase 2 OS=Bacillus subtilis GN=thrZ PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.702e-40 Identity = 92/235 (39.15%), Postives = 135/235 (57.45%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFS--DNNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 + I LPDG ++E + T + A IS SL A VNG L D++ LE D +L + T DS EG H++AH+L QA+++ YG L +GP +GFYYD G L ++I+ E E +RIEV+ ++A E+F+ D K+EI+ D+P + IT+Y+ G VDLCRGPH+P+T +K F + S AYWRG+ E LQRVYG+++ KK + ++ Sbjct: 5 VHIQLPDGQIQEYPKGITIK-EAAGSISSSLQKKAAAGQVNGKLVDLSFKLEEDAELSIVTLDSQEGLQVLRHTTAHVLAQAVKRLYGEVSLGVGPVIL--DGFYYDMKLGK-SLASGDLEAIEKEMKNIINENLEIKRIEVSYEEAEELFAQKDERLKLEILKDIPRGEDITLYQQGEFVDLCRGPHLPSTGMIKAFKLTRVSGAYWRGDSKNEVLQRVYGVAFQKKKDLDAHL 235
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_STRGC (Threonyl-tRNA synthetase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=thrS PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 3.529e-40 Identity = 93/235 (39.57%), Postives = 138/235 (58.72%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQY-GCKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNNFKVEIINDLPADKT-ITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 IKIT PDG+V+E + T+ +IAQ IS SLA AL NG L D TR + D +++ T D ++ HS+AH+ QA + + L +GP +GFYYD ++ + I+ E K KE P R EVT+D+A E+F ++ +K+E+I + D+ +T+YR G VDLCRGPH+P+T ++ F L + AYWRGN D +QR+YG ++ DKK +K Y++ Sbjct: 2 IKITFPDGAVREFESGVTT-FEIAQSISNSLAKKALAGKFNGKLIDTTRAITEDGSIEIVTPDHEDALPILRHSAAHLFAQAARRLFPDIHLGVGPAIE--DGFYYDTDNTAGQISNEDLPRIEEEMKKIVKENFPSIREEVTKDEAREIFKNDPYKLELIEEHSEDEGGLTIYRQGEYVDLCRGPHVPSTGRIQIFHLLHVAGAYWRGNSDNAMMQRIYGTAWFDKKDLKNYLQ 233
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_EXISA (Threonyl-tRNA synthetase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=thrS PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.609e-40 Identity = 93/238 (39.08%), Postives = 141/238 (59.24%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG----CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSD--NNFKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 I++T PDG+VKE + T+ D+A IS L A+ + ++G L D RP+E D ++L DS++G D HSSAH++ QAI++ YG L IGP T GFYYD D +N + I+ + E R V+RD+AL + + + K+E+I D+PAD+T+T+Y G DLCRGPH+P+TS +K F + + AYWRG+ D + LQR+YG ++ K+ + E++ Sbjct: 4 IQLTFPDGAVKEFEAGVTAE-DVAGSISPGLRKKAIAAKLDGELIDYRRPIEHDGKIELVMPDSEDGLDLMRHSSAHLMAQAIKRLYGEDNNIYLGIGP--TIENGFYYDIEM-DRRINEEDLPEIEKMMKRIVDENLEITREVVSRDEALARYKELGDPLKIELIEDIPADQTLTIYHQGEFFDLCRGPHVPSTSKLKIFKLMSVAGAYWRGDSDNKMLQRIYGTAWATKEQLAEHL 237
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLONN (Threonyl-tRNA synthetase OS=Clostridium novyi (strain NT) GN=thrS PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.609e-40 Identity = 91/235 (38.72%), Postives = 136/235 (57.87%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYI 917 IKITL DG V E ++ T +IA IS SL AL + +NG ++ + D L++ TF+ EG+DT H+++HIL QA+++ Y KL IGP G FYYD F + P+ + I+ E +K KE ++ +R+ A+ + N +KVE+I DLP + I+ Y G VDLC GPH+P+T VK L + AYWRGN++ + LQR+YG ++ K ++EY+ Sbjct: 2 IKITLKDGKVLEVEKGLTVS-EIAARISTSLRKKALGAKINGEKAELMDVINEDSTLEILTFEDQEGKDTLRHTASHILAQAVKRLYPEVKLAIGPSIENG--FYYD-FDAEFSFTPEILEKIEKEMNKIVKENLQLKKFTKSREDAINFMKERNEDYKVELIEDLPEESIISFYEQGDFVDLCAGPHVPSTKEVKAIKLLSVAGAYWRGNENNKMLQRIYGTAFTKKAELEEYL 232
BLAST of FC878164 vs. ExPASy Swiss-Prot
Match: SYT_CLOTE (Threonyl-tRNA synthetase OS=Clostridium tetani GN=thrS PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 6.020e-40 Identity = 90/236 (38.14%), Postives = 139/236 (58.90%), Query Frame = 3 Query: 222 IKITLPDGSVKEGKRWETSPMDIAQGISKSLAANALISMVNGVLWDMTRPLEADCDLKLFTFDSDEGRDTFWHSSAHILGQAIEQQYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNPDHFKSIDSEADKAAKEKQPFERIEVTRDQALEMFSDNN--FKVEIINDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKGFGCLKASSAYWRGNKDRESLQRVYGISYPDKKTVKEYIE 920 I ITL DG V E ++ DI IS +L A+ + +NG + ++ ++ D +L++ TFD +EGR T H+S+HIL QA+++ Y KL IGP G FYYD F D P+ + I+ E K KE ER E+ R++A+++ D + +KVE+I DLP + I+ Y+ G VDLC GPH+P+T +K L + AYWRG++ + LQR+YG ++ K ++ Y++ Sbjct: 2 INITLKDGKVIEVEKG-VKVSDIVMKISPALYKKAVGAKINGEIAELMTEIKEDSELEILTFDDEEGRKTVRHTSSHILAQAVKRLYPEAKLAIGPAIDNG--FYYD-FDIDFTFTPEMLEKIEKEMAKIVKENLEIERFELPREEAIKLVKDASEPYKVELIEDLPEGEVISFYKQGDFVDLCAGPHLPSTGKIKAIKLLSVAGAYWRGDEKNKMLQRIYGTAFLKKSELEAYLK 233 The following BLAST results are available for this feature:
BLAST of FC878164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878164 ID=FC878164; Name=FC878164; organism=Citrus clementina; type=EST; length=922bpback to top |