FC878172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_RHIME (Probable potassium transport system protein kup 1 OS=Rhizobium meliloti GN=kup1 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 3.716e-27 Identity = 79/243 (32.51%), Postives = 128/243 (52.67%), Query Frame = 1 Query: 250 LVLAYKTLGVVFGGLVTSPLYVYPSM--PLKSP--TEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LVLA ++GVV+G + TSPLY + P+ T+ + +G+ S+M W LT+I +KY L+AD+QGEGGT +L +LL K + ++ IL F+ + G + IGD ++TPA+SVLSA++G++ P++S +V ++ ++L++LF +Q GT+ VS F PI W +G I IF+A +P+Y F + +G G ++L Sbjct: 8 LVLALGSVGVVYGDIGTSPLYAFREALRPVSHDGVTDVEIIGLISLMIWALTIIVTIKYVLFLLRADNQGEGGTLSLLALLM----------KTANGHTA-----------------------ILFFMGIAGAALFIGDAMITPALSVLSAVEGLKLVTPALSDYVV-PIAVVILLLLFTVQSKGTAAVSNFFGPITLIWFVVMGTIGFVHIADDL-SIFRAFNPYYAASFLFNEGYVGIVVL 215
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_ZYMMO (Probable potassium transport system protein kup OS=Zymomonas mobilis GN=kup PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.854e-27 Identity = 82/243 (33.74%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 250 LVLAYKTLGVVFGGLVTSPLYVYPSM---PLKSPTEDDYL-GIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEG-WLL 963 L L+ +G+VFG + TSPLY + P +D ++ G+ S++FWT+ L+ VKY +KAD++GEGG+ +L SL+ R GA K R L+ + + + GD ++TPA+SVLSA++G+ PS S V +S ++LI LF +Q GT V LF PIM + + ++G ++II P I AL+P+Y HFF +G W L Sbjct: 34 LKLSLGAIGIVFGDIGTSPLYALKECFKGHHQLPVDDFHIYGLVSLIFWTMGLVVTVKYVMFIMKADNKGEGGSMSLLSLIIR--------------------GANPK------------LSRWLIVLGVFATALFYGDSMITPAMSVLSAVEGLTVIEPSFD-SWVPPVSVVILIGLFCIQARGTESVGRLFGPIMLVYFATLAILGAFNIITRSPAILLALNPYYAIHFFASDPLQGFWAL 243
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_GEOUR (Probable potassium transport system protein kup OS=Geobacter uraniireducens (strain Rf4) GN=kup PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.854e-27 Identity = 79/247 (31.98%), Postives = 129/247 (52.23%), Query Frame = 1 Query: 241 WENLVLAYKTLGVVFGGLVTSPLYVYPSM-PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILL--FIAMLGMCMLIGDGILTPAISVLSAMDG--IRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 WE +V K++G+VFG + TSP+Y + L PTE + GI S++ WTL ++ V+YA +A+ +GEGGT L +L R + G R+I F++ +G+ +L+GDG++TPAIS+LSA++G + S+ + ++A++ +VLF+ Q GT +V+ F P+M W + + G+ SI +P I A+SPHY +FF G + +L Sbjct: 9 WEGVV---KSMGLVFGDIGTSPIYTLTVIFALTKPTEANVFGILSMVVWTLIILVTVEYAWLAMSLGRKGEGGTIVLKEILIRLLKPG---------------------------------RQIAFVGFLSFVGVSLLLGDGVITPAISILSAVEGLVLIPGLESMRLGTLILIAALIAVVLFIFQFKGTDKVAAAFGPLMVLWFGALTVSGLVSIA-TFPKILGAVSPHYAINFFRDNGISAFFVL 218
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_BRASO (Probable potassium transport system protein kup 1 OS=Bradyrhizobium sp. (strain ORS278) GN=kup1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.854e-27 Identity = 76/241 (31.54%), Postives = 120/241 (49.79%), Query Frame = 1 Query: 253 VLAYKTLGVVFGGLVTSPLYVYPSM--PLKSPT-EDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 +LA LG+VFG + TSPLY + ++ PT LG S++ WTL +I VKY A++ D+ GEGG AL +LL K R ++ + + G ++ GDG +TPAISVLSA++G+ P++ +V A + ++L+ LF +Q GT+ + LF P+M W + ++G+ I H P +F A++P Y + G G+L+L Sbjct: 16 LLALSALGIVFGDIGTSPLYTFKTILGTGGQPTGAAAVLGALSLVIWTLFIITTVKYVMFAMRVDNDGEGGILALMALLGVKRQ----------------------------------RRPTIVALGLFGAALIYGDGAITPAISVLSALEGLNMAAPALQPYVVPA-AVVILLALFAIQSRGTASIGRLFGPVMLLWFVTIAVLGLVGIARH-PTVFAAINPSYGLSYLVSNGATGFLVL 220
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_ERYLH (Probable potassium transport system protein kup OS=Erythrobacter litoralis (strain HTCC2594) GN=kup PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.339e-27 Identity = 78/241 (32.37%), Postives = 132/241 (54.77%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPL-KSPTEDDY---LGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LA +G+VFG + TSPLY + + +P DY LG+ S++FW++TLI ++Y +I ++AD++G+GG+ AL +L+SR S +N + + ++ + + + GD ++TPAISVLSA++G+ P + + V ++ ++L+ LF+LQK GT++V LF+P+M + +G+ SI+ H P I AL+P+Y FF G +L L Sbjct: 7 LAIGAIGIVFGDIGTSPLYAFRETFVGPNPLPIDYNHVLGVVSLIFWSMTLIVAIQYVTILMRADNKGQGGSLALVALISR-------SVRNTNYGWL------------------------VVLLGVFATSLFYGDSMITPAISVLSAVEGLVVVDPEL-QGFVIPIALVLLVGLFVLQKRGTAKVGALFAPVMIVYFTVIATLGLISIVQH-PEILYALNPYYAVLFFINDGFLAFLAL 214
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_RHOSR (Probable potassium transport system protein kup OS=Rhodococcus sp. (strain RHA1) GN=kup PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 8.279e-27 Identity = 77/229 (33.62%), Postives = 119/229 (51.97%), Query Frame = 1 Query: 271 LGVVFGGLVTSPLYVYPSM-------PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFW 936 LGVVFG + TSP+Y ++ P+ T + Y G+ S++FW++ LI Y + ++AD+ GEGG AL +LL R GA SR+ +L + + G + GD ++TPAISVLSA++G++ P + + +V ++A++++ LF +Q+ GT+ V LF P+M W S G+ I H P I KALSP Y FF+ Sbjct: 40 LGVVFGDIGTSPIYTIQTVFNPEDPHPVPISTNNVY-GVVSLIFWSVMLIVTATYVLLVMRADNDGEGGVMALITLLRRM-------------------GAVRGSRV----------TAVLAGLGIFGAALFFGDSMITPAISVLSAVEGLKVVEPGLEEWIV-PITAVIIVALFSVQRRGTAAVGRLFGPVMIVWFVSIGACGVSGIARH-PEILKALSPTYALSFFF 236
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_PROAC (Probable potassium transport system protein kup OS=Propionibacterium acnes GN=kup PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 8.279e-27 Identity = 77/230 (33.48%), Postives = 116/230 (50.43%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSM-----PLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA LG+VFG + TS LY ++ PT D +GI S++FW++ L+ VKY ++AD+ GEGG AL +L+ R M H+G + L + ++G + GD +TPAISV+SA++G+ P K ++ A S ++L +LF++Q+ GT + F P+M W + +GI IIHH P I ALSPH+ F Sbjct: 30 LALAALGIVFGDIGTSVLYSLQTVFSMENHAVRPTHGDVMGIISMIFWSILLVVCVKYVIFVMRADNDGEGGILALMALVRRLM--------------ASHKGTGMTA----------------LLLGIVGAGLFYGDSFITPAISVMSAVEGLTVANPDAEKIVLPA-SVVILTLLFIVQRRGTEVIGKAFGPVMATWFLTLAALGIPWIIHH-PVIITALSPHWAILF 227
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_NITWN (Probable potassium transport system protein kup OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=kup PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 8.279e-27 Identity = 77/244 (31.56%), Postives = 124/244 (50.82%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSMPLKSPTEDDY-----LGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAM--LGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 L ++GVVFG + TSPLY + + E LG+ S++ W+L ++ KY + L+AD+ GEGGT +L +L R L RR LL +A+ +G M IGD ++TPAISVLSA++G++ P + + V L+ ++L++LF +Q GT+RV+ F+P+M W + ++G+ IH P + A++P Y HF G G +++ Sbjct: 41 LTLGSVGVVFGDIGTSPLYAFREAVDHAAQEGAVTPAIVLGVLSLILWSLFIVVTAKYVLLLLRADNNGEGGTLSLMALGQRA-----------------------------------LGRRSLLLLALGVVGASMFIGDSMITPAISVLSAVEGLKLAAPRL-QDYVVPLTLVILVMLFAVQSRGTARVASAFAPVMALWFLTIAVLGVLH-IHEDPHVLLAVNPWYAIHFLLNHGLLGLVIM 247
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_AGRRK (Probable potassium transport system protein kup OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=kup PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 8.279e-27 Identity = 78/241 (32.37%), Postives = 124/241 (51.45%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPSM--PLKSP--TEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 LA ++GVV+G + TSPLY + P+ + T + + + S+MFW LT+I +KY L+AD+ GEGGT +L +LL K + ++ +L+ + +LG + +GD ++TPA+SVLSA++G++ P++S +V +S +L +LF +Q GT V+ F PI W L GI I Y GI AL+P Y +F +G G ++L Sbjct: 21 LAVGSVGVVYGDIGTSPLYAFREALKPVAADGLTRGEVISLVSLMFWALTIIVTMKYVLFLLRADNDGEGGTLSLLALLM----------KTANGHTA-----------------------VLMLLGLLGAALFLGDAMITPALSVLSAVEGLKLVTPTLSDYIV-PISVAILALLFAIQSHGTGAVARFFGPITAIWFIVMGLAGIMHIADDY-GILAALNPWYAVNFLMNEGFLGVVVL 226
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_CORGL (Probable potassium transport system protein kup OS=Corynebacterium glutamicum GN=kup PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.081e-26 Identity = 82/243 (33.74%), Postives = 124/243 (51.03%), Query Frame = 1 Query: 253 VLAYKTLGVVFGGLVTSPLY-VYPSMPLK----SPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 +L LGVVFG + TSPLY ++ + ++ T+++ GI S++ WT+TLI VKY + +AD+QG+GG AL +LL +N+ GKF + MLG + GD ++TPAISVLSA +G+ PS + ++ +S VLI +F +Q GT +V F PIM W + +GI II H P I ++LSPH+ + + ++LL Sbjct: 17 LLTLGALGVVFGDIGTSPLYSLHTAFSMQHNKVEVTQENVYGIISMVLWTITLIVTVKYVMLVTRADNQGQGGILALVALL------------------------KNRGHWGKF----------VAVAGMLGAALFYGDVVITPAISVLSATEGLTVISPSFERFIL-PVSLAVLIAIFAIQPLGTEKVGKAFGPIMLLWFVTLAGLGIPQIIGH-PEILQSLSPHWALRLIVAEPFQAFVLL 223 The following BLAST results are available for this feature:
BLAST of FC878172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 336
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878172 ID=FC878172; Name=FC878172; organism=Citrus clementina; type=EST; length=966bpback to top |