FC878172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP1_CHRVO (Probable potassium transport system protein kup 1 OS=Chromobacterium violaceum GN=kup1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.277e-27 Identity = 76/250 (30.40%), Postives = 131/250 (52.40%), Query Frame = 1 Query: 229 KKGRWENLVLAYKTLGVVFGGLVTSPLYV----YPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 ++G+ +L LGVV+G L TSPLY + PT D+ +G+ S+ W+L L+ VKY + ++AD++GEGG AL + ++ G + +G + + + G ML GDG++TPA+SVLSAM+G++ P+++ +V A + ++L +LF++Q FG+ RV F PI+ AW + +G+ + + P I +A++P + +F R G G++ L Sbjct: 16 ERGQQSMAMLVLAALGVVYGDLGTSPLYALQEAFNGDHGVRPTPDNVVGVVSLFLWSLILMVSVKYVMVLMRADNKGEGGILALLAQITGG-----------------RSGDGRRVAVG------------WVLLGLAGAAMLYGDGVITPAVSVLSAMEGLQVATPALAAYVVPA-TVVILAMLFMIQPFGSGRVGAAFGPILAAWFVAIAALGLAQLWRN-PAILQAVNPWHGIAYFQRNGFAGFVSL 234
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANOR (Probable potassium transport system protein kup OS=Xanthomonas oryzae pv. oryzae GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/231 (34.20%), Postives = 120/231 (51.95%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 L +GVVFG + TSPLY P L +P D LGI S++FW L L+ +KY ++ ++AD+ GEGG AL +L R + G S S++ G + + G + GDG++TPAISVLSA++G++ P + ++ V ++ +VL +LFL Q+FGT RV F PI W F+ +G+Y++ P + AL+P + FF Sbjct: 22 LVIGAIGVVFGDIGTSPLYTLKEAFSPHYGL-TPDHDTVLGILSLVFWALMLVVTLKYVTVIMRADNDGEGGIMALTALAQRTLPGG--------SRSMYVVG----------------------ILGIFGASLFFGDGVITPAISVLSAVEGLQVAAPKL-EAFVVPITLVVLGMLFLAQRFGTERVGKAFGPITLVWFFALGAIGVYNMA-RAPEVLHALNPWWGVLFF 219
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_XANOM (Probable potassium transport system protein kup OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/231 (34.20%), Postives = 120/231 (51.95%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVY-----PSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFF 933 L +GVVFG + TSPLY P L +P D LGI S++FW L L+ +KY ++ ++AD+ GEGG AL +L R + G S S++ G + + G + GDG++TPAISVLSA++G++ P + ++ V ++ +VL +LFL Q+FGT RV F PI W F+ +G+Y++ P + AL+P + FF Sbjct: 22 LVIGAIGVVFGDIGTSPLYTLKEAFSPHYGL-TPDHDTVLGILSLVFWALMLVVTLKYVTVIMRADNDGEGGIMALTALAQRTLPGG--------SRSMYVVG----------------------ILGIFGASLFFGDGVITPAISVLSAVEGLQVAAPKL-EAFVVPITLVVLGMLFLAQRFGTERVGKAFGPITLVWFFALGAIGVYNMA-RAPEVLHALNPWWGVLFF 219
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_MYXXD (Probable potassium transport system protein kup OS=Myxococcus xanthus (strain DK 1622) GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 73/242 (30.17%), Postives = 128/242 (52.89%), Query Frame = 1 Query: 253 VLAYKTLGVVFGGLVTSPLYV----YPSMPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 +LA LG+V+G + TSPLY + PT + LG+ S++FW+L ++ VKY + +KAD++GEGG A+ +L+ ++ + S +R +L+ + + G +L GDGI+TPAI+VLSA++G+ +V V ++ ++L+ LFL+Q+ GT+ + +F P+M W + +G+ ++H+ P + ALSP + F G+L+L Sbjct: 38 LLALGALGIVYGDIGTSPLYALRECFTGAHGIPPTPANVLGVLSLIFWSLIIVVSVKYLLLVMKADNRGEGGILAMMALVMQRQRA----------------------------QPSHRSRPMLITLGIFGAALLYGDGIITPAITVLSAVEGLHVA-TAVFDPYVIPIALVILVALFLVQRHGTADIGAVFGPVMCIWFLTLAGLGVKELVHN-PAVLGALSPWHAVELFRHNHLHGFLVL 249
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_METAC (Probable potassium transport system protein kup OS=Methanosarcina acetivorans GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 73/236 (30.93%), Postives = 123/236 (52.12%), Query Frame = 1 Query: 268 TLGVVFGGLVTSPLYVYPSMPLKS-PTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIR--APFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHFFWRKGKEGWLLL 966 ++G+VFG + TSP+Y + L + PTE +G+ S++ WTL + V+YA +A+ +GEGGT L LL + G N+ F + +A +G+ L+GDG++TPAIS+LSA++G+R F + + + ++ I+ + LF +Q GT ++++F P+M W S GI SI + PG+ +A++P+Y F G G+ +L Sbjct: 13 SMGLVFGDIGTSPIYTLTVIFLLTRPTEVHVIGVLSLIIWTLITLVTVEYAWLAMSLGKKGEGGTIVLKELLVPLIKSG--------RNAAF-----------------------ITLLAYIGVSFLVGDGVITPAISILSAVEGLRIIPDFQDIGQGAIMFIAGIIAVALFSVQSKGTEEITWVFGPVMVLWFASLAFSGIASIF-YTPGVLRAINPYYAISFLLHNGFTGFFVL 216
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURTA (Probable potassium transport system protein kup OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=kup PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 78/232 (33.62%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL T LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R ++ KSR+ +++ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W + +G+Y I P I A++P+Y F F Sbjct: 17 LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPL---TPSAILGVISLLFWAIILVVGIKYVLFVMRADNNGEGGVLALMALSLRPLN--------------------PKSRI----------TGLMMALGIFGACMFYGDAVITPAISVMSAVEGLEVATPQLS-HLVLPITIVILIALFWIQRHGTATVGKLFGPIMVIWFVTIAALGVYHIA-RAPMIVSAINPYYAFSF 213
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURMS (Probable potassium transport system protein kup OS=Burkholderia mallei (strain SAVP1) GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL T LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R ++ KSR+ +++ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W + +GIY I P I A++P+Y F F Sbjct: 17 LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPL---TPSAILGVISLLFWAIILVVGIKYVLFVMRADNNGEGGVLALMALSLRPLN--------------------PKSRI----------TGLMMALGIFGACMFYGDAVITPAISVMSAVEGLEVATPQLS-HLVLPITIVILIALFWIQRHGTATVGKLFGPIMLLWFVTIAALGIYHIA-RAPMIVSAINPYYAFSF 213
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURMA (Probable potassium transport system protein kup OS=Burkholderia mallei GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL T LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R ++ KSR+ +++ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W + +GIY I P I A++P+Y F F Sbjct: 17 LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPL---TPSAILGVISLLFWAIILVVGIKYVLFVMRADNNGEGGVLALMALSLRPLN--------------------PKSRI----------TGLMMALGIFGACMFYGDAVITPAISVMSAVEGLEVATPQLS-HLVLPITIVILIALFWIQRHGTATVGKLFGPIMLLWFVTIAALGIYHIA-RAPMIVSAINPYYAFSF 213
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURM9 (Probable potassium transport system protein kup OS=Burkholderia mallei (strain NCTC 10229) GN=kup PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL T LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R ++ KSR+ +++ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W + +GIY I P I A++P+Y F F Sbjct: 17 LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPL---TPSAILGVISLLFWAIILVVGIKYVLFVMRADNNGEGGVLALMALSLRPLN--------------------PKSRI----------TGLMMALGIFGACMFYGDAVITPAISVMSAVEGLEVATPQLS-HLVLPITIVILIALFWIQRHGTATVGKLFGPIMLLWFVTIAALGIYHIA-RAPMIVSAINPYYAFSF 213
BLAST of FC878172 vs. ExPASy Swiss-Prot
Match: KUP_BURM7 (Probable potassium transport system protein kup OS=Burkholderia mallei (strain NCTC 10247) GN=kup PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.668e-27 Identity = 79/232 (34.05%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 256 LAYKTLGVVFGGLVTSPLYVYPS-------MPLKSPTEDDYLGIYSIMFWTLTLIGVVKYASIALKADDQGEGGTFALYSLLSRKMDIGFFSAKNLDSNSIFHEGAENKSRLGKFFEKSILARRILLFIAMLGMCMLIGDGILTPAISVLSAMDGIRAPFPSVSKSLVEALSAIVLIVLFLLQKFGTSRVSFLFSPIMGAWTFSTPLVGIYSIIHHYPGIFKALSPHYTFHF 930 LA +GVVFG + TSPLY +PL T LG+ S++FW + L+ +KY ++AD+ GEGG AL +L R ++ KSR+ +++ + + G CM GD ++TPAISV+SA++G+ P +S LV ++ ++LI LF +Q+ GT+ V LF PIM W + +GIY I P I A++P+Y F F Sbjct: 17 LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPL---TPSAILGVISLLFWAIILVVGIKYVLFVMRADNNGEGGVLALMALSLRPLN--------------------PKSRI----------TGLMMALGIFGACMFYGDAVITPAISVMSAVEGLEVATPQLS-HLVLPITIVILIALFWIQRHGTATVGKLFGPIMLLWFVTIAALGIYHIA-RAPMIVSAINPYYAFSF 213 The following BLAST results are available for this feature:
BLAST of FC878172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 336
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878172 ID=FC878172; Name=FC878172; organism=Citrus clementina; type=EST; length=966bpback to top |