FC878179

Overview
NameFC878179
Unique NameFC878179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length944
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB6_ARATH (Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 532.332 bits (1370), Expect = 1.496e-150
Identity = 253/314 (80.57%), Postives = 280/314 (89.17%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDI PRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_TRYCR (Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2)

HSP 1 Score: 531.946 bits (1369), Expect = 1.954e-150
Identity = 247/314 (78.66%), Postives = 278/314 (88.54%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAEL+DSVLDV RKEAESCDCLQGFQ                   K+REEYPDRIM T+S++PSPKVSDTVVEPYN TLSVHQLVEN+DE+ CIDNEALYDICFRTLKL+TPT+GDLNHLVS  +SGVT CLRFPGQLN+DLRKLAVN+VPFPRLHFFM GFAPL+SRGSQQYR L+VP++TQQMFDAKNMM A DP HGRYLT +A+FRGRMS KEVDEQMLN+QNKNSSYF+EWIPNN+K+++CDIPP+GLKMA TF+GN+T IQE+F+R+ EQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELIDSVLDVCRKEAESCDCLQGFQICHSLGGGTGSGMGTLLISKLREEYPDRIMMTFSIIPSPKVSDTVVEPYNTTLSVHQLVENSDESMCIDNEALYDICFRTLKLTTPTFGDLNHLVSAVVSGVTCCLRFPGQLNSDLRKLAVNLVPFPRLHFFMMGFAPLSSRGSQQYRGLSVPDVTQQMFDAKNMMQAADPAHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFIEWIPNNIKSSICDIPPKGLKMAVTFVGNNTCIQEMFRRVGEQFTAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_PNECA (Tubulin beta chain OS=Pneumocystis carinii GN=TUB-B PE=2 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 1.954e-150
Identity = 255/314 (81.21%), Postives = 280/314 (89.17%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVR+EAE+CDCLQGFQ                   KIREEYPDR+M T+SVVPSPKVSDTVVEPYNATLSVHQLVEN+DET+CIDNEALYDIC RTLKL  P YGDLNHLVS  MSG+TTCLRFPGQLN+DLRKLAVNMVPFPRLHFF+ GFAPLTS+GS  +R+LTVPELTQQMFDAKNMMAA DPRHGRYLTVAAIFRGR+SMKEV++QM ++Q KNSSYFVEWIPNNV+TA+C IPPRGLKM++TFIGNST+IQELFKR+ +QF+AMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRREAEACDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLPDPGYGDLNHLVSAVMSGITTCLRFPGQLNSDLRKLAVNMVPFPRLHFFIVGFAPLTSKGSHSFRSLTVPELTQQMFDAKNMMAASDPRHGRYLTVAAIFRGRVSMKEVEDQMHSVQQKNSSYFVEWIPNNVQTALCSIPPRGLKMSSTFIGNSTSIQELFKRVGDQFSAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB9_ARATH (Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TUBB9 PE=2 SV=1)

HSP 1 Score: 531.176 bits (1367), Expect = 3.333e-150
Identity = 253/314 (80.57%), Postives = 278/314 (88.54%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL+ PT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY AL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDI P GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYSALSVPELTQQMWDAKNMMCAADPRHGRYLTASAVFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIAPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB6_GOSHI (Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 531.176 bits (1367), Expect = 3.333e-150
Identity = 252/314 (80.25%), Postives = 280/314 (89.17%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGLK ++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   88 RPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKTSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 401          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB1_PEA (Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=3 SV=1)

HSP 1 Score: 531.176 bits (1367), Expect = 3.333e-150
Identity = 253/314 (80.57%), Postives = 277/314 (88.22%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFR LKLS P++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYR L+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK+ VCDIPP GLKMA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADEVMVLDNEALYDICFRILKLSNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRTLSVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMMNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_CICAR (Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 5.685e-150
Identity = 252/314 (80.25%), Postives = 280/314 (89.17%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQ++N+QNKNSSYFVEWIPNNVK++VCDIPP+ LKM++TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   88 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYVSLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQIINVQNKNSSYFVEWIPNNVKSSVCDIPPKNLKMSSTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 401          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB5_WHEAT (Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 5.685e-150
Identity = 252/314 (80.25%), Postives = 279/314 (88.85%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL+TP++GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQ YR+LTVPELTQQM+D+KNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDI PRGL MA+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRSLTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 399          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB5_ARATH (Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TUBB5 PE=2 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 5.685e-150
Identity = 254/314 (80.89%), Postives = 280/314 (89.17%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKLSTP++GDLNHL+S TMSGVT  LRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQY +LTVPELTQQM+D+KNMM A DPRHGRYLT +AIFRG+MS KEVDEQ+LNIQNKNSSYFVEWIPNNVK++VCDIPP+GLKMAATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT
Sbjct:   87 RPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDSKNMMCAADPRHGRYLTASAIFRGQMSTKEVDEQILNIQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT 400          
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1)

HSP 1 Score: 530.406 bits (1365), Expect = 5.685e-150
Identity = 254/314 (80.89%), Postives = 276/314 (87.90%), Query Frame = 1
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ                   KIREEYPDR+M T+SV PSPKVSDTVVEPYNATLSVHQLVEN DE   +DNEALYDICFRTLKL TPT+GDLNHL+S TMSGVT CLRFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM DAKNMM A DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GLKMA TFIGNST+IQE+F+R+ +QFTAMFR KAFLHWYT
Sbjct:   54 RPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMXTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLVTPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYT 367          
The following BLAST results are available for this feature:
BLAST of FC878179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBB6_ARATH1.496e-15080.57Tubulin beta-6 chain OS=Arabidopsis thaliana GN=TU... [more]
TBB_TRYCR1.954e-15078.66Tubulin beta chain OS=Trypanosoma cruzi PE=3 SV=2[more]
TBB_PNECA1.954e-15081.21Tubulin beta chain OS=Pneumocystis carinii GN=TUB-... [more]
TBB9_ARATH3.333e-15080.57Tubulin beta-9 chain OS=Arabidopsis thaliana GN=TU... [more]
TBB6_GOSHI3.333e-15080.25Tubulin beta-6 chain OS=Gossypium hirsutum PE=2 SV... [more]
TBB1_PEA3.333e-15080.57Tubulin beta-1 chain OS=Pisum sativum GN=TUBB1 PE=... [more]
TBB_CICAR5.685e-15080.25Tubulin beta chain OS=Cicer arietinum GN=TUBB PE=2... [more]
TBB5_WHEAT5.685e-15080.25Tubulin beta-5 chain OS=Triticum aestivum GN=TUBB5... [more]
TBB5_ARATH5.685e-15080.89Tubulin beta-5 chain OS=Arabidopsis thaliana GN=TU... [more]
TBB2_ANEPH5.685e-15080.89Tubulin beta-2 chain (Fragment) OS=Anemia phylliti... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878179 ID=FC878179; Name=FC878179; organism=Citrus clementina; type=EST; length=944bp
CGCCCCGACAACTTCGTGTTCGGACAGTCTGGCGCCGGCAACAACTGGGC
CAAGGGACACTACACAGAGGGCGCCGAGCTCGTCGACTCGGTTCTTGACG
TAGTCCGCAAAGAAGCAGAATCTTGCGATTGCCTCCAAGGTTTCCAACTG
ACACACTCGCTCGGTGGCGGTACCGGATCCGGTATGGGCACCCTACTCAT
CTCCAAAATCAGAGAAGAATACCCCGACAGAATAATGAACACATACTCAG
TAGTCCCCTCACCCAAAGTATCAGATACAGTAGTAGAACCTTACAACGCC
ACTCTCTCAGTCCATCAGCTAGTCGAAAACACAGATGAAACCTATTGTAT
TGACAACGAAGCTCTCTATGACATCTGCTTCCGCACACTCAAGCTATCGA
CACCCACATACGGAGACCTCAACCACCTGGTTTCCCTCACCATGTCCGGC
GTGACGACGTGTCTGCGGTTCCCTGGTCAGCTCAACGCCGATCTCCGCAA
ACTGGCCGTCAACATGGTTCCCTTCCCGCGTCTCCACTTCTTCATGCCTG
GATTCGCGCCCCTCACGTCCCGCGGCAGCCAGCAGTACCGCGCTTTGACC
GTGCCCGAGCTCACCCAACAGATGTTCGACGCCAAGAACATGATGGCCGC
CTGCGACCCGCGCCACGGCCGCTACCTCACCGTGGCCGCCATCTTCCGCG
GACGCATGTCCATGAAGGAGGTCGACGAGCAGATGCTCAACATCCAGAAC
AAGAACTCGTCCTACTTCGTGGAATGGATCCCGAACAACGTGAAGACCGC
CGTGTGCGACATCCCCCCGCGCGGGCTCAAGATGGCCGCCACCTTCATCG
GCAACTCCACCGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTC
ACGGCTATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGG
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