FC878179

Overview
NameFC878179
Unique NameFC878179
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length944
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB1_HOMAM (Tubulin beta-1 chain OS=Homarus americanus PE=2 SV=1)

HSP 1 Score: 575.474 bits (1482), Expect = 1.541e-163
Identity = 278/314 (88.54%), Postives = 288/314 (91.72%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            +PD+FVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAE CDCLQGFQ                   KIREE+PDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL  PTYGDLNHLVSLTMSGVTTC RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQM NIQNKNSS+FVEWIPNNVKTAVCDIPPRG+KMA+TFIGNSTAI ELFKR+ EQFTAMFRRKAFLHWYT
Sbjct:   90 KPDSFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAEKCDCLQGFQLTHSLGGGTGSGMGTLLVSKIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLQNPTYGDLNHLVSLTMSGVTTCFRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMYNIQNKNSSFFVEWIPNNVKTAVCDIPPRGIKMASTFIGNSTAIHELFKRVGEQFTAMFRRKAFLHWYT 403
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB3_RAT (Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3 PE=1 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 278/314 (88.54%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB3_MOUSE (Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 278/314 (88.54%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB3_MACFA (Tubulin beta-3 chain OS=Macaca fascicularis GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 278/314 (88.54%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB3_HUMAN (Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1 SV=2)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 278/314 (88.54%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB3_BOVIN (Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 278/314 (88.54%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT+RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB1_CAEEL (Tubulin beta-1 chain OS=Caenorhabditis elegans GN=mec-7 PE=2 SV=1)

HSP 1 Score: 574.318 bits (1479), Expect = 3.433e-163
Identity = 280/314 (89.17%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDN+VFGQSGAGNNWAKGHYTEGAELVD+VLDVVRKEAES DCLQGFQ                   KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTD T+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +QQYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB4_CHICK (Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1)

HSP 1 Score: 573.548 bits (1477), Expect = 5.856e-163
Identity = 278/314 (88.54%), Postives = 288/314 (91.72%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNF+FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE E+CDCLQGFQ                   K+REEYPDRIMNT+SVVPSPKVSDTVVEPYNATLS+HQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTT LRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT RGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVA +FRGRMSMKEVDEQML IQ+KNSSYFVEWIPNNVK AVCDIPPRGLKM++TFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTRRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB2_CAEEL (Tubulin beta-2 chain OS=Caenorhabditis elegans GN=tbb-2 PE=2 SV=1)

HSP 1 Score: 573.163 bits (1476), Expect = 7.648e-163
Identity = 276/314 (87.90%), Postives = 291/314 (92.68%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDNFVFGQSGAGNNWAKGHYTEGAELVD+VLDV+RKEAE CDCLQGFQ                   KIREEYPDRIM+++SVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC+RTLKL+ PTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL+++G+Q YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICYRTLKLTNPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 399
[Close]
BLAST of FC878179 vs. ExPASy Swiss-Prot
Match: TBB_ONCGI (Tubulin beta chain OS=Onchocerca gibsoni GN=TBB PE=3 SV=1)

HSP 1 Score: 570.852 bits (1470), Expect = 3.796e-162
Identity = 276/314 (87.90%), Postives = 289/314 (92.04%), Query Frame = 1 
Query:    1 RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYT 942
            RPDN+VFGQSGAGNNWAKGHYTEGAELVDSVLDV+RKEAE+CDCLQGFQ                   KIREEYPDRIM T+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFRTLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR +QQYRA+TV ELTQQ+FDAKNMMAACDPRHGRYLT AAIFRGRMSMK+VDEQMLNIQNKNS+YFV+WIPNNVKTAVCDIPPR LKMAATFIGNSTAIQELFKR+SEQFTAMFRRKAFLHWYT
Sbjct:   86 RPDNYVFGQSGAGNNWAKGHYTEGAELVDSVLDVIRKEAEACDCLQGFQFTHSLGGGTGSGMGTLLISKIREEYPDRIMTTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRSNQQYRAVTVAELTQQLFDAKNMMAACDPRHGRYLTAAAIFRGRMSMKDVDEQMLNIQNKNSAYFVDWIPNNVKTAVCDIPPRDLKMAATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYT 399
The following BLAST results are available for this feature:
BLAST of FC878179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 426
Match NameE-valueIdentityDescription
TBB1_HOMAM1.541e-16388.54Tubulin beta-1 chain OS=Homarus americanus PE=2 SV... [more]
TBB3_RAT3.433e-16388.54Tubulin beta-3 chain OS=Rattus norvegicus GN=Tubb3... [more]
TBB3_MOUSE3.433e-16388.54Tubulin beta-3 chain OS=Mus musculus GN=Tubb3 PE=1... [more]
TBB3_MACFA3.433e-16388.54Tubulin beta-3 chain OS=Macaca fascicularis GN=TUB... [more]
TBB3_HUMAN3.433e-16388.54Tubulin beta-3 chain OS=Homo sapiens GN=TUBB3 PE=1... [more]
TBB3_BOVIN3.433e-16388.54Tubulin beta-3 chain OS=Bos taurus GN=TUBB3 PE=2 S... [more]
TBB1_CAEEL3.433e-16389.17Tubulin beta-1 chain OS=Caenorhabditis elegans GN=... [more]
TBB4_CHICK5.856e-16388.54Tubulin beta-4 chain OS=Gallus gallus PE=1 SV=1[more]
TBB2_CAEEL7.648e-16387.90Tubulin beta-2 chain OS=Caenorhabditis elegans GN=... [more]
TBB_ONCGI3.796e-16287.90Tubulin beta chain OS=Onchocerca gibsoni GN=TBB PE... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA83DG10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA83DG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878179 ID=FC878179; Name=FC878179; organism=Citrus clementina; type=EST; length=944bp
CGCCCCGACAACTTCGTGTTCGGACAGTCTGGCGCCGGCAACAACTGGGC
CAAGGGACACTACACAGAGGGCGCCGAGCTCGTCGACTCGGTTCTTGACG
TAGTCCGCAAAGAAGCAGAATCTTGCGATTGCCTCCAAGGTTTCCAACTG
ACACACTCGCTCGGTGGCGGTACCGGATCCGGTATGGGCACCCTACTCAT
CTCCAAAATCAGAGAAGAATACCCCGACAGAATAATGAACACATACTCAG
TAGTCCCCTCACCCAAAGTATCAGATACAGTAGTAGAACCTTACAACGCC
ACTCTCTCAGTCCATCAGCTAGTCGAAAACACAGATGAAACCTATTGTAT
TGACAACGAAGCTCTCTATGACATCTGCTTCCGCACACTCAAGCTATCGA
CACCCACATACGGAGACCTCAACCACCTGGTTTCCCTCACCATGTCCGGC
GTGACGACGTGTCTGCGGTTCCCTGGTCAGCTCAACGCCGATCTCCGCAA
ACTGGCCGTCAACATGGTTCCCTTCCCGCGTCTCCACTTCTTCATGCCTG
GATTCGCGCCCCTCACGTCCCGCGGCAGCCAGCAGTACCGCGCTTTGACC
GTGCCCGAGCTCACCCAACAGATGTTCGACGCCAAGAACATGATGGCCGC
CTGCGACCCGCGCCACGGCCGCTACCTCACCGTGGCCGCCATCTTCCGCG
GACGCATGTCCATGAAGGAGGTCGACGAGCAGATGCTCAACATCCAGAAC
AAGAACTCGTCCTACTTCGTGGAATGGATCCCGAACAACGTGAAGACCGC
CGTGTGCGACATCCCCCCGCGCGGGCTCAAGATGGCCGCCACCTTCATCG
GCAACTCCACCGCCATCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTC
ACGGCTATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGG
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