FC878210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.093e-27 Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 169 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR + V L IGF+V + HL I TG +NPARSFG AVI W++ W Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHW 231
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.093e-27 Identity = 81/225 (36.00%), Postives = 119/225 (52.89%), Query Frame = 1 Query: 169 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 ++ F+ + +F++AV AEF+A I + + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR + V L IGF+V + HL I TG +NPARSFG AVI W++ W Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHW 231
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.135e-26 Identity = 81/225 (36.00%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 169 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y++AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR + V L IGF+V + HL I TG +NPARSFG AVI W + W Sbjct: 23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WANHW 231
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.935e-26 Identity = 81/225 (36.00%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 169 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR + V L IGF+V + HL I TG +NPARSFG AVI W++ W Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHW 231
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 1.254e-25 Identity = 79/225 (35.11%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 169 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINPAVT + R++S+ +++ Y+ AQCLGAI G G + + + + GG G + + G GL E+I TF LV+T+F++ D KR + V L IG +V + HL I TG +NPARSFG AVI W++ W Sbjct: 23 MVAFKGVWTQTFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR----TDVTGSIALAIGISVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHW 231
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.767e-25 Identity = 74/212 (34.91%), Postives = 110/212 (51.89%), Query Frame = 1 Query: 208 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 +A +AEFI+ I Y T+ T G++ + A +F+ V A ISGGH+NPAVTFG F+G ++L+R ++Y++AQ LG+I + S +G L++G G L EI+ TF LVYTV+ +A DPK+ ++ ++AP+ IGF V L TG +NPA SFG AV+ +W + W Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVV---SWSWSNHW 216
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25 Identity = 78/215 (36.28%), Postives = 110/215 (51.16%), Query Frame = 1 Query: 208 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKEKAWDDQW 840 +A +AEFI+ + + TD T G++ + A +F+ V A ISGGH+NPAVTFG F+G +SL++A++Y VAQ LG++ C +K GG GA L+ G + EI+ TF LVYTV+ +A DPK+ + V+AP+ IGF V LA G +NPA SFG AV+ WD+ W Sbjct: 21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPS----GLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTG---VWDNHW 217
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.226e-25 Identity = 79/214 (36.92%), Postives = 110/214 (51.40%), Query Frame = 1 Query: 181 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK 816 +E+ +F +AV AEF+A + + S IL IA AFG I L +SGGHINPA+T L +G ++SL+RA+ Y+VAQ +GAI G G + N G N L + G + E+I TF L +FS+TD +R++ PV +P L IG +V + HL I TG +NPARSFG AV+ N+ Sbjct: 3 KEVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG--NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNR 198
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24 Identity = 77/214 (35.98%), Postives = 112/214 (52.34%), Query Frame = 1 Query: 181 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK 816 +E+ +F++AV AEF+A + + S IL I+ AFG I L +SGGHINPA+T L +G ++SL+RA+ Y+ AQ +GAI G G + + + N G N L + G + E+I TF L +FS+TD +R++ PV +P L IG +V + HL I TG +NPARSFG AV+ N+ Sbjct: 3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNR 198
BLAST of FC878210 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.062e-24 Identity = 77/214 (35.98%), Postives = 113/214 (52.80%), Query Frame = 1 Query: 181 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNK 816 +E+ +F++AV AEF+A + + S IL I+ AFG I L +SGGHINPA+T L +G ++SL+RA+ Y+ AQ +GAI G G + + + N G N L++ G + E+I TF L +FS+TD +R++ PV +P L IG +V + HL I TG +NPARSFG AV+ N+ Sbjct: 3 KEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMNR 198 The following BLAST results are available for this feature:
BLAST of FC878210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878210 ID=FC878210; Name=FC878210; organism=Citrus clementina; type=EST; length=840bpback to top |