FC878211
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: PPK23_SCHPO (Serine/threonine-protein kinase ppk23 OS=Schizosaccharomyces pombe GN=ppk23 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.299e-41 Identity = 100/257 (38.91%), Postives = 134/257 (52.14%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWP 771 ++ YE LEK+ EG+YG VY+ DK+T LVALKK + + + G P T+LRE+ L + V V V LK ++YLV E+++ DLK +D+ P + +++ + QL A H H LHRDLKP N GL R + P S T +VTLWYRAPE+LLG+ Y +DMWS+GCIFAEM+ R LF G SE QL IF +LG PT ++WP Sbjct: 71 IDDYEILEKIEEGSYGIVYRGLDKSTNTLVALKKIKFDPNGIGFPITSLREIESLSSIRHDNIVELEKVV--VGKDLK--------------------DVYLVMEFMEHDLKTLLDNM-----PEDFLQSEVKTLMLQLLAATAFMHHHWYLHRDLKPSNLLMNNTGEIKLADF-GLARPVSEPKSSLTRLVVTLWYRAPELLLGAPSYGKEIDMWSIGCIFAEMITRTPLFSGKSELDQLYKIFNLLGYPTREEWP 299
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CTK1_SCHPO (CTD kinase subunit alpha OS=Schizosaccharomyces pombe GN=lsk1 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 113/295 (38.31%), Postives = 153/295 (51.86%), Query Frame = 1 Query: 10 YEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLL--CVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKS--YTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPS----LSPEGVDL 870 YEK++++GEGTYGKVYKA + TG LVALK+ RLE +++G P T +REV +LQ L +VRLL VE KS++Y+VFEY+D DL + + + P I+ Q+ + +A+ H GVLHRD+K N GL R F KS YT+ ++TLW+R PE+LLG T Y TAVD+WS GCI E+ + F G E QL I+ M+GTP WP V L W+ + + R V + LSP +DL Sbjct: 277 YEKIDQIGEGTYGKVYKAINTVTGDLVALKRIRLEQEKDGFPITTVREVKILQRLRHK-NIVRLLEIMVE-------------------------KSSVYMVFEYMDHDLTGVLLN-----SQLHFTPGNIKHLSKQIFEALAYLHHRGVLHRDIKGSN-ILLNNNGDLKFADFGLAR-FNTSSKSANYTNRVITLWFRPPELLLGETAYDTAVDIWSAGCIVMELFTGKPFFQGRDEISQLEVIYDMMGTPDVHSWPEVKNL-PWYELLKPVEEKKSRFVETFKEILSPAAIDL 537
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 96/263 (36.50%), Postives = 145/263 (55.13%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL 786 ++K++ + +GEGTYG+VYKA+DK TG++VALKK RL+ ++EG P TA+RE+ +L+ L+ + ++K + A F K YLVFEY+D DL ++S N I+SF+ QL +G+ +CH LHRD+K N GL R ++ + YT++++TLWYR PE+LLG Y+ A+D+WS GCI E+ ++ +F + E QL I R+ G+P WP V L Sbjct: 702 VDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSII-----------NMKEIVTDKEDALDF---KKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-----IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADF-GLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKL 944
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 96/263 (36.50%), Postives = 145/263 (55.13%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL 786 ++K++ + +GEGTYG+VYKA+DK TG++VALKK RL+ ++EG P TA+RE+ +L+ L+ + ++K + A F K YLVFEY+D DL ++S N I+SF+ QL +G+ +CH LHRD+K N GL R ++ + YT++++TLWYR PE+LLG Y+ A+D+WS GCI E+ ++ +F + E QL I R+ G+P WP V L Sbjct: 702 VDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDNEKEGFPITAIREIKILRQLTHQSII-----------NMKEIVTDKEDALDF---KKDKGAFYLVFEYMDHDLMGLLESGLVHFNENH-----IKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADF-GLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKL 944
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.121e-41 Identity = 97/264 (36.74%), Postives = 146/264 (55.30%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLL-QMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF-TVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL 786 ++K++ + +GEGTYG+VYKAKDK TG+LVALKK RL+ ++EG P TA+RE+ +L Q++ QS+ ++ + + D+ K YLVFEY+D DL ++S I+SF+ QL +G+ +CH LHRD+K N GL R + + + YT++++TLWYR PE+LLG Y+ A+D+WS GCI E+ ++ +F + E QL I R+ G+P WP V L Sbjct: 720 VDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDA---------------LDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-----FSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADF-GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKL 962
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 5.121e-41 Identity = 97/264 (36.74%), Postives = 146/264 (55.30%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLL-QMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF-TVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL 786 ++K++ + +GEGTYG+VYKAKDK TG+LVALKK RL+ ++EG P TA+RE+ +L Q++ QS+ ++ + + D+ K YLVFEY+D DL ++S I+SF+ QL +G+ +CH LHRD+K N GL R + + + YT++++TLWYR PE+LLG Y+ A+D+WS GCI E+ ++ +F + E QL I R+ G+P WP V L Sbjct: 720 VDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDA---------------LDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-----FSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADF-GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKL 962
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK4_HUMAN (Cell division protein kinase 4 OS=Homo sapiens GN=CDK4 PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 8.735e-41 Identity = 116/296 (39.19%), Postives = 160/296 (54.05%), Query Frame = 1 Query: 7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEG---IPPTALREVSLLQMLSQSLY--VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKS-NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWP-GVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLL 873 +YE + ++G G YG VYKA+D +G VALK R+ G +P + +REV+LL+ L + VVRL+ V ATS + + LVFE++D DL+ ++D K P P LP I+ + Q +G+ H++ ++HRDLKP+N GL R ++ + + T +VTLWYRAPEVLL ST Y+T VDMWSVGCIFAEM RR+ LF G+SE QL IF ++G P E WP VS R +P P+ + VP + G LL Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV-------------------CATSRTDREIKVTLVFEHVDQDLRTYLD---KAPPPG-LPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF-GLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG--AFPPRGPRPVQSVVPEMEESGAQLL 272
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.946e-40 Identity = 95/264 (35.98%), Postives = 146/264 (55.30%), Query Frame = 1 Query: 1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLL-QMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF-TVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTL 786 ++K++ + +GEGTYG+VYKA+DK TG+LVALKK RL+ ++EG P TA+RE+ +L Q++ +S+ ++ + + D+ K YLVFEY+D DL ++S I+SF+ QL +G+ +CH LHRD+K N GL R + + + YT++++TLWYR PE+LLG Y+ A+D+WS GCI E+ ++ +F + E QL I R+ G+P WP V L Sbjct: 724 VDKFDIIGIIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDA---------------LDFKKDKGAFYLVFEYMDHDLMGLLESGLVH-----FSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQIKLADF-GLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGELFTKKPIFQANLELAQLELISRLCGSPCPAVWPDVIKL 966
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK4_RAT (Cell division protein kinase 4 OS=Rattus norvegicus GN=Cdk4 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.541e-40 Identity = 114/295 (38.64%), Postives = 158/295 (53.56%), Query Frame = 1 Query: 7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEE---GIPPTALREVSLLQMLSQSLY--VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKS-NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLL 873 +YE + ++G G YG VYKA+D +G VALK R+ G+P + +REV+LL+ L + VVRL+ V ATS + + LVFE++D DL+ ++D K P P LP I+ + Q G+ H++ ++HRDLKP+N GL R ++ + + T +VTLWYRAPEVLL ST Y+T VDMWSVGCIFAEM RR+ LF G+SE QL IF ++G P E WP +L P+ P+ + VP + G LL Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPNVVRLMDV-------------------CATSRTDRDIKVTLVFEHIDQDLRTYLD---KAPPPG-LPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADF-GLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLPRGAFSPR-GPRPVQSVVPEMEESGAQLL 272
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK4_MOUSE (Cell division protein kinase 4 OS=Mus musculus GN=Cdk4 PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.541e-40 Identity = 114/295 (38.64%), Postives = 158/295 (53.56%), Query Frame = 1 Query: 7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEE---GIPPTALREVSLLQMLSQSLY--VVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKS-NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLL 873 +YE + ++G G YG VYKA+D +G VALK R+ G+P + +REV+LL+ L + VVRL+ V ATS + + LVFE++D DL+ ++D K P P LP I+ + Q G+ H++ ++HRDLKP+N GL R ++ + + T +VTLWYRAPEVLL ST Y+T VDMWSVGCIFAEM RR+ LF G+SE QL IF ++G P E WP +L P+ P+ + VP + G LL Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGAAGGGLPVSTVREVALLRRLEAFEHPNVVRLMDV-------------------CATSRTDRDIKVTLVFEHIDQDLRTYLD---KAPPPG-LPVETIKDLMRQFLSGLDFLHANCIVHRDLKPENILVTSNGTVKLADF-GLARIYSYQM-ALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPREVSLPRGAFAPR-GPRPVQSVVPEMEESGAQLL 272 The following BLAST results are available for this feature:
BLAST of FC878211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC878211 ID=FC878211; Name=FC878211; organism=Citrus clementina; type=EST; length=879bpback to top |