FC878211

Overview
NameFC878211
Unique NameFC878211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 8.214e-23
Identity = 87/289 (30.10%), Postives = 125/289 (43.25%), Query Frame = 1
Query:    1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVS-TLRDWHVYPQWEPQNLPRAVPSLSPEGV 864
            +++Y+ L+ +G G  G V  A D    + VA+KK       +     A RE+ L++            CV H +     N  +P              ++YLV E +D +L + I           L    +   LYQ+  G+ H HS G++HRDLKP N               GL R         T  +VT +YRAPEV+LG   Y   VD+WSVGCI  EMVR + LFPG     Q   +   LGTP  +    +  T+R+   Y +  P+      P L P+ +
Sbjct:   61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------------CVNHKNIISLLNVFTPQKTL------EEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF-GLARTAGTSFMM-TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN---YVENRPKYAGLTFPKLFPDSL 317          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22
Identity = 86/289 (29.76%), Postives = 124/289 (42.91%), Query Frame = 1
Query:    1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVS-TLRDWHVYPQWEPQNLPRAVPSLSPEGV 864
            +++Y+ L+ +G G  G V  A D    + VA+KK       +     A RE+ L++            CV H +     N  +P              ++YLV E +D +L + I           L    +   LYQ+   + H HS G++HRDLKP N               GL R         T  +VT +YRAPEV+LG   Y   VD+WSVGCI  EMVR + LFPG     Q   +   LGTP  +    +  T+R+   Y +  P+      P L P+ +
Sbjct:   61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------------CVNHKNIISLLNVFTPQKTL------EEFQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLSAIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF-GLARTAGTSFMM-TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRN---YVENRPKYAGLTFPKLFPDSL 317          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MK04_MOUSE (Mitogen-activated protein kinase 4 OS=Mus musculus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22
Identity = 82/296 (27.70%), Postives = 131/296 (44.26%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHE------IVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQN-LPRAVPSLSPEGVDLL 873
            ++   + +G G  G V  A D    + VA+KK  + + +      ALRE+ +++ L               D+ +K         S         S  Y+V EY++TDL   ++      +   L       F+YQL +G+ + HS  VLHRDLKP N               GL R      + Y+H+      +VT WYR+P +LL   +Y+ A+DMW+ GCI AEM+  + LF G  E +Q+  I   +    E+    +  +    V   WE +  L + +P ++ E +D L
Sbjct:   19 RFIDFQPLGFGVNGLVLSATDSRACRKVAVKK--IVLSDARSMKHALREIKIIRRLDH-------------DNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGTLTEDHAKL-------FMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLARIVD---QHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSSTWEVKRPLRKLLPDVNSEAIDFL 289          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22
Identity = 79/292 (27.05%), Postives = 142/292 (48.63%), Query Frame = 1
Query:   22 EKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYL--VFEYLDTDLKKFIDS--HRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHG-VLHRDLKPQNXXXXXXXXXXXXXXXGLGRAF--TVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLLS 876
            E VG G++G V+    + T + VA+KK   +   +       RE+ +++MLS     + ++ +++                 F    + +  +YL  + EY+   L + +    H++ P  R      I+ +++QL K + + H    V HRD+KPQN               G  +    T P  SY   I + +YRAPE++ G+T+Y+  +D+WS GC+ AE++  Q +FPG+S   QL+ I ++LGTP++++   ++     H +PQ +P  L R       + V+ L+
Sbjct:   43 EVVGHGSFGVVFATVIQETNEKVAIKKVLQDKRFKN------RELEIMKMLSH----INIIDLKY-----------------FFYERDSQDEIYLNLILEYMPQSLYQRLRHFVHQRTPMSR----LEIKYYMFQLFKSLNYLHHFANVCHRDIKPQNLLVDPETWSLKLCDFGSAKQLKPTEPNVSY---ICSRYYRAPELIFGATNYTNQIDIWSSGCVMAELLLGQPMFPGESGIDQLVEIIKILGTPSKQEICSMNPNYMEHKFPQIKPIPLSRVFKKEDDQTVEFLA 300          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: HOG1_GIBIN (Mitogen-activated protein kinase HOG1 (Fragment) OS=Gibberella intermedia GN=HOG1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22
Identity = 62/155 (40.00%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  295 NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTE 759
            ++Y V E L TDL + + S       RPL    IQ FLYQ+ +G+ + HS GV+HRDLKP N               GL R     +  Y   + T +YRAPE++L    Y   VD+WS GCIFAEM+  + LFPG     Q   I  +LGTP +
Sbjct:   47 DIYFVTELLGTDLHRLLTS-------RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDF-GLARIQDPQMTGY---VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPD 190          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: HOG1_FUSCU (Mitogen-activated protein kinase HOG1 (Fragment) OS=Fusarium culmorum GN=HOG1 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.830e-22
Identity = 62/155 (40.00%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  295 NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTE 759
            ++Y V E L TDL + + S       RPL    IQ FLYQ+ +G+ + HS GV+HRDLKP N               GL R     +  Y   + T +YRAPE++L    Y   VD+WS GCIFAEM+  + LFPG     Q   I  +LGTP +
Sbjct:   47 DIYFVTELLGTDLHRLLTS-------RPLEKQFIQYFLYQIMRGLKYVHSAGVVHRDLKPSNILVNENCDLKICDF-GLARIQDPQMTGY---VSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPD 190          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: JNK_DROME (Stress-activated protein kinase JNK OS=Drosophila melanogaster GN=bsk PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.390e-22
Identity = 82/252 (32.54%), Postives = 111/252 (44.05%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKS--NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPT 756
            +Y  L  +G G  G V  A D  T Q VA+KK             A RE  L+++++    ++ LL                   +AF    N +   ++YLV E +D +L + I           L    +   LYQ+  G+ H HS G++HRDLKP N               GL R         T  +VT +YRAPEV+LG   Y+  VD+WSVGCI  EM+R   LFPG     Q   I   LGTP+
Sbjct:   23 RYINLRPIGSGAQGIVCAAYDTITQQNVAIKKLSRPFQNVTHAKRAYREFKLMKLVNHK-NIIGLL-------------------NAFTPQRNLEEFQDVYLVMELMDANLCQVIQMD--------LDHDRMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKADCTLKILDF-GLARTAGTTFMM-TPYVVTRYYRAPEVILGMG-YTENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIEQLGTPS 243          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: HOG1_WALIC (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia ichthyophaga GN=HOG1 PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.121e-22
Identity = 67/196 (34.18%), Postives = 96/196 (48.98%), Query Frame = 1
Query:  295 NLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTE---KQWPGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLL 873
            ++Y + E L TDL + + S       RPL    +Q FLYQ+ + +   H  GV+HRDLKP N               GL R     +  Y   + T +Y+APE++L    Y +AVD+WSVGCIFAEM+  + +FPG     QL  I  +LG+P E         +T R     P+    +     P+ + E +DLL
Sbjct:   26 DIYFITELLGTDLHRLLSS-------RPLERQFVQYFLYQMLRALKFVHPAGVVHRDLKPSNILINENCDLKICDF-GLARLQDPQMTGY---VSTRYYKAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGRPIFPGKDHVHQLTVITELLGSPPEDVINTITSENTRRFVDALPKRHKISFADRFPNANAEEIDLL 210          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MK08_XENLA (Mitogen-activated protein kinase 8 OS=Xenopus laevis GN=mapk8 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 78/251 (31.08%), Postives = 112/251 (44.62%), Query Frame = 1
Query:    1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTP 753
            +++Y+ L+ +G G  G V  A D    + VA+KK       +     A RE+ L++ ++    ++ LL V     SL+                    +LY+V E +D +L + I           L    +   LYQ+  G+ H HS G++HRDLKP N               GL R         T  +VT +YRAPEV+LG   Y   VD+WSVGCI  EM++   LFPG     Q   +   LGTP
Sbjct:   23 LKRYQNLKPIGSGAQGIVCAAFDAVLERHVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIIGLLNVFTPQKSLEEFQ-----------------DLYIVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF-GLARTAGTSFMM-TPYVVTRYYRAPEVILGMG-YKENVDIWSVGCILGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: MK04_RAT (Mitogen-activated protein kinase 4 (Fragment) OS=Rattus norvegicus GN=Mapk4 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.081e-22
Identity = 82/288 (28.47%), Postives = 128/288 (44.44%), Query Frame = 1
Query:   31 GEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHE------IVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEKQWPGVSTLRDWHVYPQWEPQN-LPRAVPSLSPEGVDLL 873
            G G  G V  A D    + VA+KK  + + +      ALRE+ +++ L               D+ +K         S         S  Y+V EY++TDL   ++          L     + F+YQL +G+ + HS  VLHRDLKP N               GL R   +  + Y+H+      +VT WYR+P +LL   +Y+ A+DMW+ GCI AEM+  + LF G  E +Q+  I   +    E+    +  +    V   WE +  L + +P ++ E +D L
Sbjct:    1 GCGGNGLVLSATDSRACRKVAVKK--IVLSDARSMKHALREIKIIRRLDH-------------DNIVKVYEVLGPKGSDLQGELFKFSVAYIVQEYMETDLACLLEQGT-------LTEEHAKLFMYQLLRGLKYIHSANVLHRDLKPANIFISTEDLVLKIGDFGLAR---IADQHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCILAEMLTGKMLFAGAHELEQMQLILDTIPVVREEDKEELLRVMPSFVSSTWEVKRPLRKLLPDVNREAIDFL 263          
The following BLAST results are available for this feature:
BLAST of FC878211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MK10_HUMAN8.214e-2330.10Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK10_RAT1.830e-2229.76Mitogen-activated protein kinase 10 OS=Rattus norv... [more]
MK04_MOUSE1.830e-2227.70Mitogen-activated protein kinase 4 OS=Mus musculus... [more]
MDS1_YEAST1.830e-2227.05Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]
HOG1_GIBIN1.830e-2240.00Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
HOG1_FUSCU1.830e-2240.00Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
JNK_DROME2.390e-2232.54Stress-activated protein kinase JNK OS=Drosophila ... [more]
HOG1_WALIC3.121e-2234.18Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
MK08_XENLA4.076e-2231.08Mitogen-activated protein kinase 8 OS=Xenopus laev... [more]
MK04_RAT9.081e-2228.47Mitogen-activated protein kinase 4 (Fragment) OS=R... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA33CF09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878211 ID=FC878211; Name=FC878211; organism=Citrus clementina; type=EST; length=879bp
ATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTACGGGAA
AGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCTGAAGA
AAACAAGACTCGAAATGGACGAAGAAGGCATCCCCCCGACCGCTCTCCGC
GAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTCCGCCT
CCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCCCAGCC
CCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTAATCTC
TATCTCGTGTTTGAATACCTCGATACCGATCTAAAGAAATTCATCGACTC
GCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCATTCAGA
GCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCCACGGT
GTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAGGACAA
GGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCACCGTTC
CTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGGCTCCC
GAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACATGTGGTC
CGTTGGTTGCATTTTCGCTGAGATGGTTAGAAGGCAGGCTTTGTTCCCTG
GTGACTCTGAGTTCCAGCAATTGCTTCATATTTTCAGGATGCTGGGAACA
CCAACTGAGAAACAGTGGCCAGGTGTTTCTACTCTGAGGGACTGGCATGT
GTATCCACAGTGGGAGCCGCAGAACTTGCCACGTGCTGTTCCATCTCTGA
GTCCTGAGGGAGTGGATCTTCTGTCGTTA
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