FC878211

Overview
NameFC878211
Unique NameFC878211
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length879
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: DYRK3_MACFA (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Macaca fascicularis GN=DYRK3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 74/257 (28.79%), Postives = 121/257 (47.08%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQ-----SLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +YE L+ +G+G++G+V +  D    Q VALK  R   +E+     A  E+ +L+ L +     S+ V+ +L                        S   ++++ + FE L  DL + I  ++     +     L++ F   + + +   H + ++H DLKP+N                    F    K YT+ I + +YRAPE++LGS  YST +D+WS GCI AE++  Q LFPG+ E  QL  +  +LG P  K
Sbjct:  188 RYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVR---NEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHML-----------------------ESFTFRNHVCMAFELLSIDLYELIKKNKF----QGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSSTKVIDFGSSCFEYQ-KLYTY-IQSRFYRAPEIILGS-RYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPPK 411          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: DYRK3_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Homo sapiens GN=DYRK3 PE=1 SV=3)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 74/257 (28.79%), Postives = 121/257 (47.08%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQ-----SLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +YE L+ +G+G++G+V +  D    Q VALK  R   +E+     A  E+ +L+ L +     S+ V+ +L                        S   ++++ + FE L  DL + I  ++     +     L++ F   + + +   H + ++H DLKP+N                    F    K YT+ I + +YRAPE++LGS  YST +D+WS GCI AE++  Q LFPG+ E  QL  +  +LG P  K
Sbjct:  208 RYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVR---NEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHML-----------------------ESFTFRNHVCMAFELLSIDLYELIKKNKF----QGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSSTKVIDFGSSCFEYQ-KLYTY-IQSRFYRAPEIILGS-RYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPPK 431          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CDK20_MACMU (Cell division protein kinase 20 OS=Macaca mulatta GN=CDK20 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.500e-20
Identity = 66/195 (33.85%), Postives = 97/195 (49.74%), Query Frame = 1
Query:    1 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVP-LKSYTHEIVT 582
            M++Y  L ++GEG +G V+KAK   TG++VALKK  L   E+G P  ALRE+  LQ +  + YVV+L  V                       + G     L FE++ +DL + +   +     RPL    ++S+L  L KGVA CH++ ++HRDLKP N               GL R F+    + YTH++ T
Sbjct:    1 MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGFPNQALREIKALQEMGDNQYVVQLKAV---------------------FPHGG--GFVLAFEFMLSDLAEVVRHAQ-----RPLAQAQVKSYLQMLLKGVAFCHANNIVHRDLKPAN-LLISASGQLKIADFGLARVFSPDGSRLYTHQVAT 166          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: YAKA_DICDI (Probable serine/threonine-protein kinase yakA OS=Dictyostelium discoideum GN=yakA PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19
Identity = 84/269 (31.23%), Postives = 131/269 (48.70%), Query Frame = 1
Query:    4 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALK--KTRLEMDEEG-IPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGT-PTEKQWPGVSTLRDWH 798
            +KY+ L+ +G+GT+G+V K K+  T +LVA+K  K +    ++G +    L+ ++         +++RLL     DS +                   K +L +VFE L  +L + I    K  N R L   LI+ FL Q+   +    +  ++H DLKP+N                 G A       YT+ I +  YR+PEVL+G T Y  ++DMWS+GCI AE+     LFPG+SE+ Q+  I  M G  P++    G S+ R +H
Sbjct:  203 QKYKVLDSLGQGTFGQVVKCKNCDTDELVAIKILKNKQAYFQQGRLEIQTLKSLNDQHDPEDKNHILRLL-----DSFIH------------------KMHLCIVFELLSVNLFELI----KQNNFRGLSTNLIKVFLIQILDALIVLANANIIHCDLKPENILLQNVNSPAIKIID-FGSACYEKSTLYTY-IQSRHYRSPEVLVG-TVYCASIDMWSLGCISAELFLGLPLFPGNSEYNQISRIVEMRGIFPSDLLDKGKSSTRYFH 441          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19
Identity = 73/257 (28.40%), Postives = 121/257 (47.08%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQ-----SLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +YE L+ +G+G++G+V +  D    Q VALK  R   +E+     A  E+ +L+ L +     S+ V+ +L                        S   ++++ + FE L  DL + I  ++     +     L++ F   + + +   H + ++H DLKP+N                    F    K YT+ I + +YRAPE++LG   YST +D+WS GCI AE++  Q LFPG+ E  QL  +  +LG P +K
Sbjct:  207 RYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVR---NEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHML-----------------------ESFTFRNHVCMAFELLSIDLYELIKKNKF----QGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSATKVIDFGSSCFEYQ-KLYTY-IQSRFYRAPEIILGC-RYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLGMPPQK 430          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.450e-19
Identity = 73/257 (28.40%), Postives = 121/257 (47.08%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQ-----SLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +YE L+ +G+G++G+V +  D    Q VALK  R   +E+     A  E+ +L+ L +     S+ V+ +L                        S   ++++ + FE L  DL + I  ++     +     L++ F   + + +   H + ++H DLKP+N                    F    K YT+ I + +YRAPE++LG   YST +D+WS GCI AE++  Q LFPG+ E  QL  +  +LG P +K
Sbjct:  207 RYEVLKIIGKGSFGQVARVYDHKLRQYVALKMVR---NEKRFHRQAAEEIRILEHLKKQDKTGSMNVIHML-----------------------ESFTFRNHVCMAFELLSIDLYELIKKNKF----QGFSVQLVRKFAQSILQSLDALHKNKIIHCDLKPENILLKHHGRSATKVIDFGSSCFEYQ-KLYTY-IQSRFYRAPEIILGC-RYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMIELLGMPPQK 430          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CSK22_ARATH (Casein kinase II subunit alpha-2 OS=Arabidopsis thaliana GN=CKA2 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.894e-19
Identity = 74/255 (29.02%), Postives = 117/255 (45.88%), Query Frame = 1
Query:    4 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLD-TDLKKFIDSHRKGPNPRPLPPTL----IQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMV-RRQALFPGDSEFQQLLHIFRMLGT 750
            + YE + KVG G Y +V++  +    +   +K  +    ++       RE+ +LQ L     +V+LL V        S  PS                  L+FEY++ TD K              L PTL    I+ ++Y+L K +  CHS G++HRD+KP N               GL   F  P K Y   + + +++ PE+L+    Y  ++DMWS+GC+FA M+ R++  F G     QL+ I ++LGT
Sbjct:   32 DDYEVVRKVGRGKYSEVFEGINMNNNEKCIIKILKPVKKKK-----IRREIKILQNLCGGPNIVKLLDVVR---DQHSKTPS------------------LIFEYVNSTDFKV-------------LYPTLTDYDIRYYIYELLKALDFCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAE-FYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNQDQLVKIAKVLGT 246          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: CSK22_CHICK (Casein kinase II subunit alpha' OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.230e-19
Identity = 76/301 (25.25%), Postives = 134/301 (44.52%), Query Frame = 1
Query:    4 EKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLD-TDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMV-RRQALFPGDSEFQQLLHIFRMLGTPTEKQW---------PGVSTLRDWHVYPQWEPQNLPRAVPSLSPEGVDLL 873
            + Y+ + K+G G Y +V++A +    + V +K  +    ++       REV +L+ L     ++ L     +D+     + +P                 LVFEY++ TD K+             L    I+ ++Y+L K + +CHS G++HRD+KP N               GL   F  P + Y   + + +++ PE+L+    Y  ++DMWS+GC+ A M+ R++  F G   + QL+ I ++LGT     +         P  + +   H   +WE          +SPE +DLL
Sbjct:   38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKK-----IKREVKILENLRGGTNIINL-----IDTVKDPVSKTPA----------------LVFEYINNTDFKQLYQI---------LTDFDIRFYMYELLKALDYCHSMGIMHRDVKPHNVMIDHQQKKLRLIDWGLAE-FYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIELDPHFNDILGQHSRKRWENFIHSENRHLVSPEVLDLL 302          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: DYRK2_CHICK (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Gallus gallus GN=DYRK2 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.218e-19
Identity = 73/252 (28.97%), Postives = 120/252 (47.62%), Query Frame = 1
Query:    7 KYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +YE L+ +G+G++G+V KA D    Q VALK  R   +E+     A  E+ +L               EH+    K NN +         +   +S++ + FE L  +L + I  ++      PL    ++ F + + + +   H + ++H DLKP+N                 G +     + YT+ I + +YRAPEV+LG+  Y   +DMWS+GCI AE++    L PG+ E  QL  +  +LG P+ K
Sbjct:  146 RYEVLKVIGKGSFGQVVKAYDHKMHQHVALKMVR---NEKRFHRQAAEEIRIL---------------EHLRKQDKDNNMN---VIHMLENFTFRSHICMTFELLSMNLYELIKKNKFQGFSLPL----VRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVID-FGSSCYEHQRVYTY-IQSRFYRAPEVILGA-RYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSPK 369          
BLAST of FC878211 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.195e-19
Identity = 72/252 (28.57%), Postives = 112/252 (44.44%), Query Frame = 1
Query:   19 LEKVGEGTYGKVYKAKDKATGQL---VALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTH-YSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRMLGTPTEK 762
            +E +G G++G V K        L   VA+KK R    +        RE  LLQ++        ++C   + +        PD  + F        ++Y+V E+    L + +   R     R L    I+  +YQ+ + + + HS  ++HRDLKP N               GL R+      S T  + T WYR+PEV+      Y+   DMWS+GCI AE++  + LFPGD    Q   I ++ G+P E+
Sbjct:  121 IEYLGGGSFGNVIKTSAVCRDGLRRYVAIKKMREPFFDPHHARRIFRETKLLQLMRHD----NIICALDIYT--------PDEENDFR-------DVYVVTEFAGRSLYQILKQQRDYGR-RVLTDEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDSDLMILDF-GLARSLEKKDTSLTQYVQTRWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLTGEPLFPGDEPNAQYQRITQLCGSPDEE 351          
The following BLAST results are available for this feature:
BLAST of FC878211 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DYRK3_MACFA8.500e-2028.79Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_HUMAN8.500e-2028.79Dual specificity tyrosine-phosphorylation-regulate... [more]
CDK20_MACMU8.500e-2033.85Cell division protein kinase 20 OS=Macaca mulatta ... [more]
YAKA_DICDI1.450e-1931.23Probable serine/threonine-protein kinase yakA OS=D... [more]
DYRK3_RAT1.450e-1928.40Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MOUSE1.450e-1928.40Dual specificity tyrosine-phosphorylation-regulate... [more]
CSK22_ARATH1.894e-1929.02Casein kinase II subunit alpha-2 OS=Arabidopsis th... [more]
CSK22_CHICK3.230e-1925.25Casein kinase II subunit alpha' OS=Gallus gallus P... [more]
DYRK2_CHICK4.218e-1928.97Dual specificity tyrosine-phosphorylation-regulate... [more]
PMK3_CAEEL7.195e-1928.57Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA33CF09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA33CF09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878211 ID=FC878211; Name=FC878211; organism=Citrus clementina; type=EST; length=879bp
ATGGAGAAGTACGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTACGGGAA
AGTGTACAAGGCAAAGGACAAAGCGACCGGGCAGTTGGTTGCTCTGAAGA
AAACAAGACTCGAAATGGACGAAGAAGGCATCCCCCCGACCGCTCTCCGC
GAAGTGTCCCTCCTCCAGATGCTCTCTCAATCCCTTTACGTCGTCCGCCT
CCTCTGCGTCGAACACGTGGACTCCTCTCTCAAATCCAACAACCCCAGCC
CCGACTCCGCTTCCGCCTTCGCCACCTCCAACAACGGCAAGTCTAATCTC
TATCTCGTGTTTGAATACCTCGATACCGATCTAAAGAAATTCATCGACTC
GCACCGCAAGGGCCCCAATCCGAGGCCGCTGCCCCCCACTCTCATTCAGA
GCTTCTTGTACCAGCTTTGCAAAGGCGTCGCCCACTGCCACAGCCACGGT
GTCCTTCATCGCGACCTGAAGCCGCAGAATCTTCTCCTTGATAAGGACAA
GGGGATTCTCAAGATCGCCGATCTTGGCCTCGGACGCGCCTTCACCGTTC
CTCTCAAAAGCTATACCCACGAGATTGTTACTCTCTGGTATAGGGCTCCC
GAGGTGCTTCTTGGTTCCACTCATTACTCCACTGCTGTCGACATGTGGTC
CGTTGGTTGCATTTTCGCTGAGATGGTTAGAAGGCAGGCTTTGTTCCCTG
GTGACTCTGAGTTCCAGCAATTGCTTCATATTTTCAGGATGCTGGGAACA
CCAACTGAGAAACAGTGGCCAGGTGTTTCTACTCTGAGGGACTGGCATGT
GTATCCACAGTGGGAGCCGCAGAACTTGCCACGTGCTGTTCCATCTCTGA
GTCCTGAGGGAGTGGATCTTCTGTCGTTA
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