FC878214

Overview
NameFC878214
Unique NameFC878214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.881e-52
Identity = 110/260 (42.31%), Postives = 164/260 (63.08%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY-TDKRTRSIVTSFA 871
            FY  SCP+ E IVR  +  A+ ++  +AA L+R+HFHDCFVQGCDGS+LL+ S S   E+N+ PN S      + VDE++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS + +   +  N+P+P +    I+  F  +  +  + VALSG HT+G + C +F  RLY +      D TL++++A NL++ CP S  + N +  DI S   FDN Y+ +L+   GLL SD+ L+ +++++R +V  +A
Sbjct:   40 FYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYA 298          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.375e-52
Identity = 115/265 (43.40%), Postives = 160/265 (60.38%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY--TDKRTRSIVTSFA 871
            L+ TFY  +CP   +IVR  IQ AL+ D  + A LIR+HFHDCFV GCD S+LL+ +    SE+NA PN++  +     VD ++  +   C  VVSC+D+LALA+  SV+L+GGP++ + LGRRDS T        ++PSP  + + I   F     N  + VALSG HT G A C  F NRL+        DPTL+ T  + L++ CP + S +T T  D+ +P+ FDN Y+ +L +  GLL SDQ+L+  T   T +IVTSFA
Sbjct:   32 LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSAR-GFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFA 295          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.375e-52
Identity = 113/260 (43.46%), Postives = 160/260 (61.54%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY-TDKRTRSIVTSFA 871
            FY  SCP+ E IVR  +  A +++  +AA L+R+HFHDCFVQGCDGS+LL+ S S   E+N+ PN S      + VDE++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS T +      +LP P +    I   F  +  N  + VALSG HT+G + C +F  RLY +      D TL+K++A  L++ CP S  + N +  DI S   FDN Y+ +L+   GLL SDQ L+ +++++R +V  +A
Sbjct:   39 FYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYA 297          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.326e-52
Identity = 114/247 (46.15%), Postives = 151/247 (61.13%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPT-SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT 835
            LS   Y +SCP L  IVR Q++ ALK +I +AA LIR+HFHDCFV GCD SVLL+G+ SE+ A PN++      + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D      ++  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+        D TL+ T  ++L+  CP   + N T   D  S + FDN Y+ +L+  +GLL+SDQ L++
Sbjct:   30 LSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNSEKLAIPNVN-SVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFS 275          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.326e-52
Identity = 116/266 (43.61%), Postives = 161/266 (60.53%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN----LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT--DKRTRSIVTSFA 871
            L+ TFY  +CP   +IVR  IQ A + D  + A LIR+HFHDCFV GCD S+LL+ S    SE+NA PN +  +     VD ++  +   C  VVSC+DILALA+  SV+L+GGP++ + LGRRDS T A +      +PSPF   + I + F     N  + VALSG HT G A C  F NRL+        DPTL+ T  ++L++ CP + S +T T  D+ +P+ FDN Y+ +L +  GLL SDQ+L++     T ++VTSFA
Sbjct:    2 LNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSAR-GFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLT-ANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFA 265          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.326e-52
Identity = 108/251 (43.03%), Postives = 162/251 (64.54%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT 835
            LS +FYD++CP++  IV   I NAL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D+++A + K C R VSCAD+LA+AA++S+ L+GGP++ +P GRRDS + F  +   NLP P S    + + F+    + + + VALSGGHT G + C    +RLY        DPTLDK++   L+K CP + + +  V FD+R+P +FDNKYYV+L   +GL+ SDQ+L++
Sbjct:   24 LSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFS 274          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.087e-51
Identity = 114/258 (44.19%), Postives = 154/258 (59.69%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD ++ +V   C + VSCADILA+AARDSV   GGP++ + LGRRDS T        +LP+P S+   ++ +F  K  +  + VALSG HT+G A C  F +RLY   +  +D +FA  LK  CP    S  +N    D  +PN FD+ YY +L++ +GLL SDQ L+    T + V +F+
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLY--NETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFS 276          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.087e-51
Identity = 114/258 (44.19%), Postives = 154/258 (59.69%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD ++ +V   C + VSCADILA+AARDSV   GGP++ + LGRRDS T        +LP+P S+   ++ +F  K  +  + VALSG HT+G A C  F +RLY   +  +D +FA  LK  CP    S  +N    D  +PN FD+ YY +L++ +GLL SDQ L+    T + V +F+
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLY--NETNIDSSFATALKANCPRPTGSGDSNLAPLDTTTPNAFDSAYYTNLLSNKGLLHSDQVLFNGGSTDNTVRNFS 276          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.420e-51
Identity = 114/260 (43.85%), Postives = 160/260 (61.54%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST--SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD----SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIV 859
            L   FY +SCP  E I+   IQN +     LAA LIR+HFHDCFV+GCDGSVL+  ++  +E++A PNL+LR     FV+ ++A + K C + VSCADI+AL ARD+V  +GGP++ +P GRRD    +KT AT  N+P P SN T +   F+ +  N ++ V LSG HT+G++HC +   RLY      KQDP+LD  +A NLK     S ++N+T+   D  S   FD  YY  ++ R+GL  SD  L T+  T  ++
Sbjct:   29 LQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLR--GFGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEAT-NNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVI 285          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 3.164e-51
Identity = 115/266 (43.23%), Postives = 163/266 (61.28%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKR---TRSIVTSFA 871
            L+ TFYD SCP + +IVR  I N L+ D  + A ++R+HFHDCFV GCD S+LL+ +TS    +  L     A  F  VD ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     + + F +   +   + VALSGGHT G   C    +RLY        DPTL+ T+   L++ CP + + +  V FD+R+P VFDNKYYV+L  ++GL+ SDQ+L++      T  +V SFA
Sbjct:   30 LTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFA 295          
The following BLAST results are available for this feature:
BLAST of FC878214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER15_ARATH4.881e-5242.31Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER53_ARATH6.375e-5243.40Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER14_ARATH6.375e-5243.46Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PERN_ARMRU8.326e-5246.15Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PERA2_ARMRU8.326e-5243.61Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER38_ARATH8.326e-5243.03Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_ORYSJ1.087e-5144.19Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI1.087e-5144.19Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER30_ARATH1.420e-5143.85Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1B_ARMRU3.164e-5143.23Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA6DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878214 ID=FC878214; Name=FC878214; organism=Citrus clementina; type=EST; length=875bp
AACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATAT
CTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCACAAAAG
CCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCTGTCC
CAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAG
ATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGATTGCTTC
GTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCA
AAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAG
ACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGC
GCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGG
GCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAA
CAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAAC
GATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGG
CGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATCGCCTCT
ATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCTCAAA
AAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCG
GTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAACCGAC
AGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGG
AGCATTGTCACGAGCTTTGCTGTGG
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