FC878214

Overview
NameFC878214
Unique NameFC878214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 4.569e-50
Identity = 109/252 (43.25%), Postives = 157/252 (62.30%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT 835
            L+ TFYD +CP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS   E++A PN +  +     +D ++A V   C R VSCADIL +AA+ +V L+GGP++ +PLGRRDS + F  +   NLP+PF     +   F+    +   + VALSGGHT G   C    +RLY        DPTL+ T+   L+  CP + +    V FD+R+P VFDNKYYV+L   +GL+ +DQ+L++
Sbjct:   31 LTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSAR-GFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNLKELKGLIQTDQELFS 281          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.967e-50
Identity = 108/251 (43.03%), Postives = 156/251 (62.15%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT 835
            L+ TFYD SCP + +IVR  I N L+ D  +A  ++R+HFHDCFV GCD S+LL+ +TS +  +  L     A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     +  +F+    +   + VALSG HT G   C    +RLY        DPTL+ T+   L+  CP + + +  V FD+R+P VFDNKYYV+L  ++GL+ SDQ+L++
Sbjct:   33 LTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNLKEQKGLIQSDQELFS 283          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.793e-50
Identity = 105/262 (40.08%), Postives = 158/262 (60.31%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG--STSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFAV 874
            L   +Y   CPK E IVR      + +   LAA L+R+HFHDCFV+GCDGSVLL+   + +E++A PNL+L+    + VD  +  + ++C  ++SCAD+LAL ARD+VA+ GGP + +PLGRRD   SK    ++NLPSPF++   +  +F  K  NA++ V LSGGHT+G++ C    +RLY        DP+++ ++   LK+ CP +D   +   D  S   FD  Y+  +  ++GL TSD  L  D  T++ V + A+
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDAVPNLTLK--GYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPPTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAI 285          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.736e-49
Identity = 104/260 (40.00%), Postives = 165/260 (63.46%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK---TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVF-DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT-DKRTRSIVTSFA 871
            FYDQSCPK + IV+  +  A + D  + A L+R+HFHDCFV+GCD S+LL+ S    SE+ + PN +  +   + ++E++  + +EC   VSCADILALAARDS  ++GGP++++PLGRRD++      +  ++P+P +    IL  F+ +  +  + V+LSG HT+G + C +F  RLY      K D TL + +A  L++ CP S  + T  F D  +P  FDN Y+ +L+  +GLL+SD+ L+T +K+++ +V  +A
Sbjct:   37 FYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSAR-GFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILFTKNKQSKELVELYA 295          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.736e-49
Identity = 107/262 (40.84%), Postives = 167/262 (63.74%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARP-NLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L+  FY +SCP L  +VR+ ++ A+ ++  + A L+R+ FHDCFV GCDGS+LL+ + S   E+ + P N S+R    + +D+++ +V K C  +VSCADILA+ ARDSV L GGP + + LGRRDS T  FA   +  +P P +  + ++N F+ +  + R+ VALSG HT+G A C  F NR+Y   +  +D +FA + ++ CP    S  N     D+RSP+ FD+ +Y  L++++GLLTSDQ L+ +  T S+V +++
Sbjct:   21 LNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVR--GFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYS 278          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.736e-49
Identity = 103/260 (39.62%), Postives = 157/260 (60.38%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L+  FY  SCP L S V+  +++A+  +  + A ++R+ FHDCFV GCDGS+LL+ +   T EQNA PN +  +     +D +++ V K C  VVSCADILA+AARDSV   GGPN+++ +GRRD++T +      N+P+P S+ + +++ F     + R+ VALSG HT+G + C  F  R+Y   +  ++  FA   ++TCP    S   N    D+ +   FDN Y+ +LM ++GLL SDQ L+    T SIV  ++
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSAR-GFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIY--NETNINAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYS 286          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.267e-49
Identity = 111/265 (41.89%), Postives = 154/265 (58.11%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSN-NTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLY--TDKRTRSIVTSFA 871
            L+ TFY  +CP   +IVR  IQ AL+ D  +   LIR+HFHDCFV GCDGS+LL+ ++   SE+NA  N +  +     VD ++  +   C  +VSC+DILALA+  SV+L+GGP++ + LGRRD  T        +LPSPF     I + F        + V+LSG HT G   C  F NRL+        DPTL+ T  ++L++ CP + SN   T  D+ +P+ FDN Y+ +L +  GLL SDQ+L+  T   T  IV SFA
Sbjct:   33 LNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTSSIQSEKNAPANANSTR-GFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFA 296          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.051e-49
Identity = 106/269 (39.41%), Postives = 161/269 (59.85%), Query Frame = 2
Query:  104 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT--VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-----YPKQDPTLDKTFANNLKKTCPTSDS---NNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            P    L   +YDQSCP  E I+ + ++NA   D  + A L+R+ FHDCF++GCD S+LL+ + S   E++  PN+S+R  +   +++ + ++ K C R VSCAD++A+AARD V LSGGP + +  GR+D          NLP P  N + ++  F  +  + ++ V LSGGHT+G +HC +F +RL     +   DP+++  FA  LKK CP + +   N  TV D  S +VFDN YY  +++ +G+  SDQ L  D RT+ IV +FA
Sbjct:   21 PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVR--SFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCPRTSNRGKNAGTVLDSTS-SVFDNVYYKQILSGKGVFGSDQALLGDSRTKWIVETFA 286          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.125e-48
Identity = 106/268 (39.55%), Postives = 161/268 (60.07%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPT-----LDKTFANNLKKTCPTSD---SNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDK---RTRSIVTSFA 871
            L+  +Y  +CP +  +++K+++  +K+D   AA +IR+HFHDCFVQGCDGSVLL+ + +   E+ A PN++  K   K VD ++  +  EC  VVSCAD+L + ARD+  L GGP +D+P+GR+DSKT +      NLP+P      I+  F  +  +  + VAL G HT+G A C  F +R+Y     T     + +T+  +L++ CP S     +N T  D  +PN+FDN  Y  L+  +GLL SDQ++YT     +TR IV+ +A
Sbjct:   30 LTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLK-GYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNPVSETYLASLREICPASSGEGDSNVTAIDNVTPNLFDNSIYHTLLRGEGLLNSDQEMYTSLFGIQTRRIVSKYA 296          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.470e-48
Identity = 103/253 (40.71%), Postives = 151/253 (59.68%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            FY QSCP+ E+IVR  ++        + A L+R+HFHDCFV+GCD S+L++ + SE+ A PN S+R+     +D ++A++   C   VSCADI+ LA RDSVAL+GGP+Y +P GRRD +    + V LP P  + +  ++ F  K  N  + VAL G HTVG  +C  F++R+   Q     DP++D     +L+ TC  S    T   D  SP  FDN+++  +  R+G+L  DQ L +D +TR IV  +A
Sbjct:   28 FYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLIDSTNSEKTAGPNGSVRE--FDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNNLDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNS---ATAALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYA 275          
The following BLAST results are available for this feature:
BLAST of FC878214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER32_ARATH4.569e-5043.25Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER33_ARATH5.967e-5043.03Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1_ARATH7.793e-5040.08Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER72_ARATH1.736e-4940.00Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER67_ARATH1.736e-4940.84Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER52_ARATH1.736e-4939.62Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER54_ARATH2.267e-4941.89Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER66_ARATH5.051e-4939.41Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER11_ARATH1.125e-4839.55Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER57_ARATH1.470e-4840.71Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA6DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878214 ID=FC878214; Name=FC878214; organism=Citrus clementina; type=EST; length=875bp
AACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATAT
CTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCACAAAAG
CCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCTGTCC
CAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAG
ATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGATTGCTTC
GTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCA
AAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAG
ACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGC
GCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGG
GCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAA
CAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAAC
GATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGG
CGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATCGCCTCT
ATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCTCAAA
AAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCG
GTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAACCGAC
AGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGG
AGCATTGTCACGAGCTTTGCTGTGG
back to top