FC878214

Overview
NameFC878214
Unique NameFC878214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:125..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.526e-48
Identity = 101/257 (39.30%), Postives = 155/257 (60.31%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN---LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            FY ++CP+ ESIVR++++ A+ K+    A ++R  FHDCFV GCD S+LL+ + +    + +LS       F  VD+++  + K C   VSCADI+ +AARD+VAL+GGP++++ LGR+DS T +   +   +PSP +N T +++ F     + ++ VALSG H++G   C +   RLY      K DP L+ ++   L K CP     N T     +P VFDN+Y+ DL++ +G L SDQ LYT+  TR  V  F+
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLGGDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFS 283          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.244e-47
Identity = 105/263 (39.92%), Postives = 159/263 (60.46%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK---TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDK-RTRSIVTSFA 871
            LS  FY+ SCP  ++IV+  + NA   D  +AA ++R+HFHDCFV GCD SVLL+ S + ++ + + + R  A  F  +DE+++ +  EC   VSCAD+LAL ARDS+ + GGP++++ LGRRD++      ++ N+PSP S    IL  F  +  +  + VAL G HT+G + C  F  RLY        D TL++ +A+ L++ CP S +  N    D  +P  FDN YY +L+N +GLL+SD+ L+T    T  +V  +A
Sbjct:   41 LSPQFYENSCPNAQAIVQSYVANAYFNDPRMAASILRLHFHDCFVNGCDASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGLDLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILFTQSIETMEMVKYYA 303          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 189.889 bits (481), Expect = 1.625e-47
Identity = 103/260 (39.62%), Postives = 157/260 (60.38%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L+  FY  SCP L S V+  +++A+     + A ++R+ FHDCFV GCDGS+LL+ ++S   EQNA PN +  +     ++++++ V K C  VVSCADILA+AARDSV   GGPN+++ +GRRD+KT +      N+P+P  + + +++ F     + R+ VALSG HT+G + C  F  R+Y   +  ++  FA   +++CP    S   N    DI S   FDN Y+ +LM ++GLL SDQ L+    T SIV  ++
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSAR-GFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVY--NETNINAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYS 258          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.620e-47
Identity = 108/250 (43.20%), Postives = 146/250 (58.40%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCP-TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIV 859
            +Y  +C  +ESIVR  +++    +   A G++R+HFHDCFVQGCD SVLL G  SE+ A PNLSLR      ++E + ++   C R VSCADILALAARD V L+GGP + +PLGR D + + A+ V LP P  +  V    F EK  N ++ V L+ GHT+G A C  F +R +        DPT+  +F   ++  CP   D     V D  S + FD  Y  +L N +GLL SDQ L+T+  TR IV
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNSERTAIPNLSLR--GFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPLNGDPATRVVLDTGSGDQFDTSYLNNLKNGRGLLESDQVLWTNLETRPIV 285          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.620e-47
Identity = 104/258 (40.31%), Postives = 147/258 (56.98%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGG--PNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVF---DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            FY Q+C  +E+IV K +  A  KD  +A  +IR++FHDCF  GCD S+LL+GS SE+ A PNLS+R    + +D++++ V KEC RVVSCADI+ALA RD V L+ G    Y++P GR D K + A +V+LPSP          F ++  +  + V L GGHT+G+ HC    +RLY      K DP++D      L   CP S S +  +    +  S N  D  +Y ++   +G+L  DQ L  D  T  +VT  A
Sbjct:   32 FYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSNSEKKASPNLSVR--GYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKLAIDDLTSKMVTDIA 287          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.728e-47
Identity = 113/257 (43.97%), Postives = 149/257 (57.98%), Query Frame = 2
Query:  128 TFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-YPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT--DKRTRSIVTSFA 871
            TFYD+SCP + +IVR+ +Q AL  D    A LIR+HFHDCFV GCDGSVLLE   G  SE  A  N ++       V+ ++A V K C  VVSCADILA+A+  SV L+GGP +++ LGRRDS+       +  LPSPF N T +   F     ++ + VALSG HT G + C  F  RL     D TL+  +A  L++ C +S  +     D  +PN FD  YY +L +  G LTSDQ L++   + T  IV  FA
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANI--TGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQAC-SSGRDTFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFA 254          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.376e-46
Identity = 110/262 (41.98%), Postives = 153/262 (58.40%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKE--CGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVV-NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY---PKQ--DPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L   FY +SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+LL  S SE++   + SL  +    V + +  + ++  C   VSCADILALA RD V L+GGPNY + LGRRD +  T A+V  +LP P      +   F     +  + +ALSG HT+G AHC  F+ R+Y   PK+  DPTL+  +A  L++ CP   D       D  SPN FDN Y+ +L    GL TSDQ L++D+R+RS V SFA
Sbjct:   25 LQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILL-ASPSEKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFA 285          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.797e-46
Identity = 104/259 (40.15%), Postives = 152/259 (58.69%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF-ATVVN--LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT-TVF-DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L+  FY +SCPK   I+R+ I N        AA  +R+ FHDCF  GCD SVL+  +   T+E+++  NLSL  +    V   +  +   C   VSC+DI+A+A RD +   GGP Y++ LGRRDS+T  +++V+  LP P    + +++ F  + F+ +E VALSG HT+G +HC  FTNR+ P      +  FA  LKK C  S ++ T +VF D+ +PN FDN Y+ ++    GLL SD  L++D RTR  V  +A
Sbjct:   32 LTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQEMVALSGAHTIGFSHCKEFTNRVNPNNSTGYNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDPRTRPFVELYA 290          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.064e-46
Identity = 104/258 (40.31%), Postives = 147/258 (56.98%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL--EGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSI 856
            LS TFYD +CP + SIVR  +    + D    A +IR+HFHDCFV GCDGS+LL  +G+ +E++A  N+         VD+++  +   C  VVSCADILALA+   V L+ GP++ +  GR+DS T        ++PSPF    V++  F  K  +  + VALSG HT G A C  F  RL+        D T+D TF   L+  CP   +N  T    DI +PN FDN Y+ +L + QGLL +DQ+L++   + +I
Sbjct:   24 LSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPANVG--AGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGMDLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATI 279          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 3.064e-46
Identity = 105/248 (42.34%), Postives = 153/248 (61.69%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV-FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYT 835
            FY  +CP +  I+   I + L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +  +     +D ++  + + C   VSCADIL +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPF N T +   F +   N   + VALSGGHT G A C   T RLY        DP+L+ T+   L++ CP + +    V FD+ +P+ FD++YY +L N +GL+ SDQ+L++
Sbjct:   35 FYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNANSAR-GFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFS 281          
The following BLAST results are available for this feature:
BLAST of FC878214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER17_ARATH9.526e-4839.30Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER36_ARATH1.244e-4739.92Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PERP7_BRARA1.625e-4739.62Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER70_ARATH3.620e-4743.20Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER60_ARATH3.620e-4740.31Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER2_CUCSA4.728e-4743.97Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER16_ARATH1.376e-4641.98Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER63_ARATH1.797e-4640.15Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PERX_TOBAC3.064e-4640.31Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER22_ARATH3.064e-4642.34Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA6DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878214 ID=FC878214; Name=FC878214; organism=Citrus clementina; type=EST; length=875bp
AACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATAT
CTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCACAAAAG
CCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCTGTCC
CAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAG
ATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGATTGCTTC
GTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCA
AAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAG
ACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGC
GCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGG
GCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAA
CAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAAC
GATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGG
CGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATCGCCTCT
ATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCTCAAA
AAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCG
GTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAACCGAC
AGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGG
AGCATTGTCACGAGCTTTGCTGTGG
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