FC878214

Overview
NameFC878214
Unique NameFC878214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.002e-46
Identity = 101/261 (38.70%), Postives = 145/261 (55.56%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL--EGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-----YPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            LS  +Y  +CP +E IV++ +    K+ +  A   +R+ FHDCFV+GCD SV +  E   +E++A  N SL  +    V + +  V  +C  VVSCADILALAARD V L GGP + + LGRRD   SK       LP P  +   ++  F     +  + +ALSG HT+G +HC  F NRL     +   DPT+D  +A  L + C   + +     D+ S + FDN YY +L+ R+GL TSDQ L+ D  +++ V  FA
Sbjct:   32 LSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFNDLSSQATVVRFA 292          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.002e-46
Identity = 103/259 (39.77%), Postives = 147/259 (56.76%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT--TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L+  +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP Y++ LGR+D   SK      NLP    +   +L+ F++  F  +E VALSGGHT+G +HC  F+NR++PK DP L+  FA  LK  C   ++N T     D  +P  FDN Y+ +L    GLL SD  L+ D  TR  V  +A
Sbjct:   26 LTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDPSTRPFVELYA 284          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.227e-46
Identity = 113/277 (40.79%), Postives = 153/277 (55.23%), Query Frame = 2
Query:   98 KPPVAKG---LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GST--SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPS--PFSNTTV--ILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTV--FDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            KPP  +    LS  +Y + CP+LE++V        K+    A   IR+ FHDCFV+GCDGS+L+E   GS   +E+ A  N  LR+E    + + +A V   C  +VSC+DILA+AARD + L+GGP Y +  GR D K  +T  N+P   P SN+TV  ++  F  K     E V LSG HT+G AHC  F  RLY      + DP+LD+     L+ +CP S  ++  V   D  +P VFDN Y+  L    GLL SDQ L+ D RT+ I    A
Sbjct:   32 KPPAPRPHRELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKR-STAKNVPPNIPRSNSTVDQLIKLFASKGLTVEELVVLSGSHTIGFAHCKNFLGRLYDYKGTKRPDPSLDQRLLKELRMSCPFSGGSSGVVLPLDATTPFVFDNGYFTGLGTNMGLLGSDQALFLDPRTKPIALEMA 307          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.916e-46
Identity = 103/249 (41.37%), Postives = 145/249 (58.23%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIV 859
            FY   C  +ESIVR  +Q+ ++     A G++R+HFHDCFV GCDGSVLL G+TSE+ A PN SLR    + ++E +AR+ K C R VSCADIL LAARD+V L+GG  +++PLGR D + + A+ VNLP P  +      DF  KT N  + V L GGHT+G A C     R        + DP++D +F   +   CP +      + D  S + FD  +   + + + +L SD  L+ D  TR+I+
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLR--GFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQNGGTRVEL-DEGSVDKFDTSFLRKVTSSRVVLQSDLVLWKDPETRAII 286          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.986e-45
Identity = 109/259 (42.08%), Postives = 150/259 (57.92%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS---KTFATVVNLPSPFSNTTVILNDFREK-TFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPT---SDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            LS TFYD SCP+  + ++  +  A+  D  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      +D ++ ++   C + VSCADIL +AARDSV   GGP++ +PLGRRDS          +LP   S+   +   F +K   N  + VALSG HT+G A C  F  R+Y   D  ++  +A +L+  CP    S   +    D  + N FDN YY +LM+++GLL SDQ L+ +  T + V +FA
Sbjct:   23 LSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSG--MEQNAIPNAGSLR--GFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY-GGDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFA 276          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.779e-45
Identity = 105/254 (41.34%), Postives = 150/254 (59.06%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSF 868
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y      ++  F  +L + CP + ++ T    D+ +PN FDN YY +L+  +GLL SDQ L+    T SIVT +
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY-NSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEY 282          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.779e-45
Identity = 105/254 (41.34%), Postives = 150/254 (59.06%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNT-TVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSF 868
            LS TFYD +CP   S +R  I++++  +   AA +IR+ FHDCFVQGCD S+LL G+ SE+ +  N  +     + +D  +A V + C  VVSCADILA+AARD+    GGP++ + LGRRDS T        +LP      + ++++F  K  N RE VALSG HT+G A C  F  R+Y      ++  F  +L + CP + ++ T    D+ +PN FDN YY +L+  +GLL SDQ L+    T SIVT +
Sbjct:   32 LSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGSERASPANDGVL--GYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIY-NSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLVTSRGLLISDQVLFNADSTDSIVTEY 282          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.548e-45
Identity = 99/262 (37.79%), Postives = 152/262 (58.02%), Query Frame = 2
Query:  101 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            P     L   FY +SCP+ ESIV   + N  + D  + A  +R+ FHDCFV+GCD S+L++   G  SE++  PN S+R    + +DE + ++   C R VSCADI+ LA RDSVAL+GGP + +P GRRD  ++    VNLP P    +  +  F  +  N  + V L  GGH+VG+AHC  F +RL    D  ++ +  ++L++ C +S ++ TT  D ++    DN  Y ++  ++G+L  DQ+L  D+ T  IV+ +A
Sbjct:   16 PSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGPNASVR--GYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL---SDRAMEPSLKSSLRRKC-SSPNDPTTFLDQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYA 271          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.196e-44
Identity = 104/266 (39.10%), Postives = 152/266 (57.14%), Query Frame = 2
Query:  107 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARV--HKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            V+  L   FY  SCP +E+IVR  ++   ++    A   +R+ FHDCFV+GCD S+++  S SE++   ++SL  +    V + +  V  +  C   VSCADILALA R+ V L+GGP+Y + LGRRD +  T A+V + LP P  N   +   F     +  + +ALSG HT+G AHC   + R+Y      + DP++++ +   LK+ CP   D       D  SP  FDN Y+ +L   +GL TSDQ L+TD+R+RS V SFA
Sbjct:   23 VSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMI-ASPSERDHPDDMSLAGDGFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFA 287          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.196e-44
Identity = 104/269 (38.66%), Postives = 151/269 (56.13%), Query Frame = 2
Query:  104 PVAKG-LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKKTCPTSDSNNTTVFDIR-SPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            PVA   L + FY +SCP  E+IV   ++    +D  + A L R+HFHDCFVQGCD S+L++ +T   SE+NA PN S+R    + +DE++  +  +C   VSC+DI+ LA RD+V L GGP+Y +P GRRD   S        LP PF +   +L+ F  K  N  ++VAL G HTVG+A C  F +R+   Q     DP++D T A  L+ TC            +  +P  FDN ++  +  R+G+L  DQ + +D  T  +V  +A
Sbjct:   17 PVALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVR--GFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLRNTCAVPGGFAALDQSMPVTPVSFDNLFFGQIRERKGILLIDQLIASDPATSGVVLQYA 283          
The following BLAST results are available for this feature:
BLAST of FC878214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER55_ARATH4.002e-4638.70Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER41_ARATH4.002e-4639.77Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER19_ARATH5.227e-4640.79Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER69_ARATH8.916e-4641.37Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER1_HORVU1.986e-4542.08Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER2_ZINEL5.779e-4541.34Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL5.779e-4541.34Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER44_ARATH7.548e-4537.79Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER45_ARATH2.196e-4439.10Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER28_ARATH2.196e-4438.66Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA6DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878214 ID=FC878214; Name=FC878214; organism=Citrus clementina; type=EST; length=875bp
AACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATAT
CTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCACAAAAG
CCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCTGTCC
CAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAG
ATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGATTGCTTC
GTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCA
AAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAG
ACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGC
GCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGG
GCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAA
CAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAAC
GATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGG
CGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATCGCCTCT
ATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCTCAAA
AAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCG
GTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAACCGAC
AGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGG
AGCATTGTCACGAGCTTTGCTGTGG
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