FC878214

Overview
NameFC878214
Unique NameFC878214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length875
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.579e-42
Identity = 99/261 (37.93%), Postives = 139/261 (53.26%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTS-DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            FY  +CP +E IVR  +Q  +++        +R++FHDCFV GCD SV++  +    +E++   NLSL  +    V + +  V     C   VSCADIL +A RD V L+GGP Y + LGRRD   S   +    LP P  +   +   F E   +  + +ALSG HT+G AHC    NRLY        DPT++K +   LK +CP + D       D  +P  FDN YY +L   +GL TSDQ L+TD R++  V  +A
Sbjct:   31 FYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWA 291          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.811e-42
Identity = 98/263 (37.26%), Postives = 149/263 (56.65%), Query Frame = 2
Query:  104 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFA-TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            P+   LS  +YD+ CP  E IV  +++   K D  L   L+R+ FHDC V GCD SVLL+   +E+ +  + +LR    + +D++++ + K C   VSCADIL  A+R +    GGP +    GRRDSK ++A  V  +PS   + T +L  F+    N  + V LSG HT+G A C    +RLY        DP++D  +A+ L++ C    ++ T   D  +P VFDN+YY++L    G+L++DQ+L  D RT  +V +FA
Sbjct:   46 PLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLDYEGTERRSPASKTLR--GFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSKHSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCRW--ASETVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFA 304          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.020e-41
Identity = 104/263 (39.54%), Postives = 143/263 (54.37%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVI---LNDFREKTFNARETVALSGGHTVGLAHCPAFTNR--LYPKQ-----DPTLDKTFANNLKKTCPTSDSNNTTVF--DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            LS+ FY  SCP  E IVR  +++A   D  +   L+R+ FHDCFVQGCDGSVL+ G+ +E++   N SL   A+  ++ ++  +   C   VSCADIL LAARD+V   GGP   +P GRRD +        P+       +   +N F  K  +  + V LSG HT+G AHC  F +R  L PK      D +LD ++A  L   C +S    TTV   D  + + FDN+YY +L+  +GL  +D  L  D RTR IV   A
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPGNASLGGFAV--IESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILA 291          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.063e-41
Identity = 101/265 (38.11%), Postives = 142/265 (53.58%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDELRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCP-TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            L   FY  SCP +E IV+K +Q  +K+        +R+ FHDCFV GCD SV+++    + +E++   N+SL  +    V + +  +     C   VSCADILALA RD V  + GP+Y + LGR D    T A+V  NLP P +  T +   F +      + +ALS  HT+G AHC    NR+Y        DPTL+K +A  L+  CP T D       D  +P  FDN Y+ +L   +GL TSDQ L+TD R++  V  +A
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWA 291          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.128e-40
Identity = 103/267 (38.58%), Postives = 147/267 (55.06%), Query Frame = 2
Query:  119 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALS-GGPNYDLPLGRRDSK-TFATVV--NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKKTCPTS----DSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSF 868
            L   FY  SCP  E IVR+ +   ++ +  LA  L+R+H+HDCFV+GCD S+LL+     + SE+ ARPNLSL     + +DE++  + K C   VSCADIL LAARD+V+     P +++  GR D + + AT    +LPS  +N T +   F E   +  + VALSG HT+G+AHC  F  RL         DP+L+ ++A+ LK  C       + +     D   P  FD+ Y+V L+  +GL TSD  L TD     I + F
Sbjct:   46 LKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSL--SGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVF 310          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.924e-40
Identity = 97/256 (37.89%), Postives = 138/256 (53.91%), Query Frame = 2
Query:  131 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-PKQDPTLDKTFANNLKKTCP--TSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            +Y ++CP    IVR+ +     +    AAG +R+ FHDCF++GCD SVL+  ++   +E++   N SL  +A   V  ++  +   C  VVSCADILA A RD V + GGP +D+ LGR+D   SK      N+P        I   F++  F+ RE VALSG HT+G +HC  F++RLY  + D  ++  FA  LK  C   T D       D+ +P  FDN Y+ +L    GLL SD  L  D  T+  V  +A
Sbjct:   37 YYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYA 292          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 7.311e-40
Identity = 94/260 (36.15%), Postives = 140/260 (53.85%), Query Frame = 2
Query:  116 GLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARP-NLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIR----SPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            GL   FY  +CP+ E IVR+Q++   K+    A   +R  FHDC V+ CD S+LL+ +  E   +  + S      ++++E++  + +EC  VVSC+DIL L+AR+ +   GGP   L  GRRD   S+T      LP    + +V+L  F+    +    VAL G H+VG  HC    +RLYP+ DP+L+     ++   CP S  +   V  +R    +P V DN YY ++++ +GLL  D  L  DKRTR IV   A
Sbjct:   30 GLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLLVDHQLAHDKRTRPIVKKMA 289          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.247e-39
Identity = 98/263 (37.26%), Postives = 149/263 (56.65%), Query Frame = 2
Query:  101 PPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVF-DIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            P V   L   FY+ +CP  ESIV + + N   ++  + A L+R+ FHDC V+GCD S+L++ +T   SE++   N  +R    + +DE +  +   C + VSCADI+ +A RDS+AL+GGP + +  GRRD  ++  + V L  P  +    +  F+   FN    VAL  GGHTVG+AHC  F +R+   +DP +D      LKK+C     N+ +VF D  +P   DN+ Y  ++ ++ +L  D +L  D  TRSIV+ FA
Sbjct:   16 PSVFAQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVR--GFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPSDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI---KDPKMDSKLRAKLKKSC--RGPNDPSVFMDQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFA 271          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 4.012e-38
Identity = 96/268 (35.82%), Postives = 144/268 (53.73%), Query Frame = 2
Query:  113 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQ----NARPNLSLRKEALKFVDELRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL--YPKQDPTLDKTFANNLKKTC----PTSDSNNTT-VFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            +GLS+++Y+++CPK+E IVR  + +    D    A L+R+ FHDC VQGCD S+LLE    +Q    ++  N  +RK  L  V  ++  +  EC + VSC+D++ LAARD+VAL+GGP   +PLGR+DS            LP   ++    L+ F  K     E+VA+ G HT+G+ HC    +R          +D  F   L+  C    PTS +   T V + ++  +FD  YY D +  +G L  D ++  D RTR  V +FA
Sbjct:   36 EGLSYSYYEKTCPKVEEIVRSSLSSMFILDPTSPAALLRLMFHDCQVQGCDASILLEPIRDQQFTELDSAKNFGIRKRDL--VGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFA 301          
BLAST of FC878214 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.524e-37
Identity = 95/247 (38.46%), Postives = 135/247 (54.66%), Query Frame = 2
Query:  161 SIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDELRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAF--TNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGLLTSDQDLYTDKRTRSIVTSFA 871
            S VR  + +A+  +  + A LIR+HFHDCFV GCDG +LL+      T EQN+ PN +  +   + + + +  V   C  + VSCADILA+AARDSVA  GG  Y++ LGR D++T      +  LP+PF N TV +  F +K F  RE VAL+G HTVG A C     +  + P          A  L+  C  + +++       +P +FD  YY +L N QG++ SDQ L  D  T   VT ++
Sbjct:   83 SAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSAR-GYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLREMVALAGAHTVGFARCSTVCTSGNVNP----------AAQLQCNCSATLTDSDLQQLDTTPTMFDKVYYDNLNNNQGIMFSDQVLTGDATTAGFVTDYS 318          
The following BLAST results are available for this feature:
BLAST of FC878214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER51_ARATH4.579e-4237.93Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER7_ARATH7.811e-4237.26Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER18_ARATH1.020e-4139.54Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER73_ARATH5.063e-4138.11Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER24_ARATH1.128e-4038.58Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER65_ARATH1.924e-4037.89Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER42_ARATH7.311e-4036.15Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER8_ARATH1.247e-3937.26Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER29_ARATH4.012e-3835.82Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PERX_SOLTU1.524e-3738.46Suberization-associated anionic peroxidase OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA6DF10RM1 IVIA1 Citrus clementina cDNA clone IC0AAA6DF10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC878214 ID=FC878214; Name=FC878214; organism=Citrus clementina; type=EST; length=875bp
AACAATGGCAACTGCTTCAGCTTCTTCTTTCATTTCTCTTCTTTTGATAT
CTTCTCTTTTGCTTGCTTCTTTATCCTCTTCTTTCACTGAGGCACAAAAG
CCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCTGTCC
CAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAAAAAG
ATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCATGATTGCTTC
GTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTGAGCA
AAATGCACGTCCAAACCTAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAG
ACGAACTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGC
GCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGG
GCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTCGCAA
CAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCTCAAC
GATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCTCCGG
CGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTTACCAATCGCCTCT
ATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCTCAAA
AAGACATGCCCCACTTCGGATTCCAACAACACCACCGTCTTCGACATCCG
GTCCCCGAACGTGTTCGACAACAAGTACTACGTTGACTTGATGAACCGAC
AGGGGTTGCTGACGTCGGACCAGGATCTTTACACGGACAAGAGAACGAGG
AGCATTGTCACGAGCTTTGCTGTGG
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