FC878215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.201e-19 Identity = 49/141 (34.75%), Postives = 79/141 (56.03%), Query Frame = 3 Query: 300 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIF-ALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVV 719 +PE C++ V + +P + C +A ++ + + AA SD VWE LPS Y L+ + +LSKK+IF +L V ++G K W+++ +G+ C +S + I + YW WI ES+F VA L+ + WFEV G + Sbjct: 35 LPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLV----LQSANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKI 171
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana GN=SKIP3 PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 3.494e-19 Identity = 46/139 (33.09%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 291 LGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIED-RRYWNWIPTEESRFHVVAYLQQIWWFE 704 L +PE C++ + + +P + C A ++ F A SD VWE LP++Y+ L+ P R + K+ F+L + P+ +DG +WL++ +G+ C+ +S AM ++ + D + + WIP ESRF VA L++ + FE Sbjct: 24 LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLI---TPSRVFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQRFLWIPCPESRFETVAALREAYRFE 159
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.958e-18 Identity = 42/146 (28.77%), Postives = 76/146 (52.05%), Query Frame = 3 Query: 297 DIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFA-LLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPL 731 D+PE C+A + + +P + C ++ ++ R AA S++ WE LPS+Y+ +D S K +F P+ +DG W+++ +G+ C +S + + I ++ +W W+ +SRF VA L + WFE+ G + L Sbjct: 5 DLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYID----NSLSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSL 146
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.863e-18 Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 3 Query: 300 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVK 722 +PE+CVA + + TP + + A ++ FR A SD VWE LP++Y ++ + SKK+++ L + D+G K +++++G++ +S++ ++IT + R YW+W P +SRF L W E+ G ++ Sbjct: 2 LPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQ 142
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.607e-18 Identity = 46/150 (30.67%), Postives = 79/150 (52.67%), Query Frame = 3 Query: 291 LGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVKFPLPAD 740 + ++PE C+A + TP ++C L+ ++ FR AA SD VW + LP+++ P L K+ F+L+ P+ + L+R +G C ++ +A+ I ++RYW+WI +RF VA L +WW E+ G + L +D Sbjct: 1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFP--AGFAAPAG-LPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSD 147
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: PP2B5_ARATH (F-box protein PP2-B5 OS=Arabidopsis thaliana GN=PP2B5 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.769e-16 Identity = 52/152 (34.21%), Postives = 81/152 (53.29%), Query Frame = 3 Query: 267 NGESMGPGLGDIPESCVACVFMYLTPPEICNLARL-NHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVV 719 NG S D+P+ C+A + + + P LA L + +F +SDSVWE LP D + L+P R + SKK+++ L P P +G LD+ +G+ C+ +S K + I+ + + +YW WI ESRF V L I F++ GV+ Sbjct: 28 NGSSAS--FDDLPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPP--PDYVSLLPKSRVFS-SKKELYFALCDPFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKWISIPESRFDEVPELLNIDSFDIRGVL 174
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: PP2B7_ARATH (F-box protein PP2-B7 OS=Arabidopsis thaliana GN=PP2B7 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.374e-15 Identity = 45/163 (27.61%), Postives = 77/163 (47.24%), Query Frame = 3 Query: 222 KLKIEMGASLSSLTDNGESMGPGLGDIPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRF-HVVAYLQQIWWFEV 707 ++K + S S G + LGD+PE C++ + + +P + C A ++ F A SD VWE +P Y+ LL ++ + K+ FAL V + K++W+++ TG+ C+ +S A+ + W WI S + V L WFE+ Sbjct: 17 RVKKTLRLSASDQQSQGVTEPLSLGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLS---RSQHFSSKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASAL---NLSTHHTWKWITNPVSAWLETVPELLTTRWFEI 173
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: PP2B3_ARATH (F-box protein PP2-B3 OS=Arabidopsis thaliana GN=PP2B3 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.998e-15 Identity = 40/112 (35.71%), Postives = 65/112 (58.04%), Query Frame = 3 Query: 300 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDI-FALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRY 632 +PE+C++ + + TP + C A ++ AF A SDSVWE LP +Y L+ PE + LSKK++ F+L P+ + G K WLD+ +G C+ +S K M I+ + ++ Sbjct: 16 LPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLV----PESRVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: P2B14_ARATH (F-box protein PP2-B14 OS=Arabidopsis thaliana GN=PP2B14 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.540e-14 Identity = 39/141 (27.66%), Postives = 75/141 (53.19%), Query Frame = 3 Query: 300 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVK 722 +PE+C+A + + +P + + + ++ FR A SD VWE LPS+Y+ L+ + SKK+I+ L + D+ K +++ +G++ +S + ++IT + YW+W +SRF A L E++G ++ Sbjct: 4 LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDSRFSESAELIITDRLEIEGKIQ 144
BLAST of FC878215 vs. ExPASy Swiss-Prot
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.425e-12 Identity = 39/141 (27.66%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 300 IPESCVACVFMYLTPPEICNLARLNHAFRGAASSDSVWENKLPSNYQDLLDLMPPERYLNLSKKDIFALLSRPVPFDDGNKEVWLDRVTGRVCLSISTKAMAITGIEDRRYWNWIPTEESRFHVVAYLQQIWWFEVDGVVK 722 +PE+CVA + + +P + + + ++ FR A SD VWE LPS+Y+ L+ + SKK+I+ L + D+ K +++ +G++ +S + ++IT + Y +W +SRF A L E+ G ++ Sbjct: 4 LPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQ 144 The following BLAST results are available for this feature:
BLAST of FC878215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >FC878215 ID=FC878215; Name=FC878215; organism=Citrus clementina; type=EST; length=787bpback to top |